RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 PNO1Q9NRX1 252 aaKnown RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 OR1A1Q9P1Q5 309 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 ERVK-18Q9QC07 812 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 SPRR3Q9UBC9 169 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 GIMAP2Q9UG22 337 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 SAMD4AQ9UPU9 718 aaKnown RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 ITM2BQ9Y287 266 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 WDR45Q9Y484 360 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 MAP1AP78559 2803 aaPredicted RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 KIAA1549LQ6ZVL6 1849 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 DNAH9Q9NYC9 4486 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 MYH1P12882 1939 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 RP1P56715 2156 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 SONP18583 2426 aaKnown RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 MYO5AQ9Y4I1 1855 aaKnown RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 C13orf42A0A1B0GVH6 325 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 MPHOSPH10O00566 681 aaKnown RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 CASC3O15234 703 aaKnown RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 CCL16O15467 120 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 CFLARO15519 480 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 BUB1O43683 1085 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 SLC25A27O95847 323 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 IGSF6O95976 241 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 IGKV5-2P06315 115 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 SFTPBP07988 381 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 CPA3P15088 417 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 GCFC2P16383 781 aaKnown RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 PTBP1P26599 531 aaKnown RBP eCLIP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 GDI1P31150 447 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 PRKCIP41743 596 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 MAGEB1P43366 347 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 GPC3P51654 580 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 GEMP55040 296 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 MRPS11P82912 194 aaKnown RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 GFPT1Q06210 699 aaPredicted RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 SLAQ13239 276 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 LINC00483Q53H64 154 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 BEND3Q5T5X7 828 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 PRR9Q5T870 116 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 TRAT1Q6PIZ9 186 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 CWC27Q6UX04 472 aaKnown RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 SLC22A16Q86VW1 577 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 PARGQ86W56 976 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 TMEM126BQ8IUX1 230 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 SKA3Q8IX90 412 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 NHLRC2Q8NBF2 726 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 CCDC191Q8NCU4 936 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 DUSP18Q8NEJ0 188 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 OR7G3Q8NG95 312 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 OR1E3Q8WZA6 343 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 P3H4Q92791 437 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 FGF13Q92913 245 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 CXorf58Q96LI9 332 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 LINC00477Q96M19 166 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 ZNF641Q96N77 438 aaPredicted RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 ARHGDIGQ99819 225 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 DDX50Q9BQ39 737 aaKnown RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 NTMT1Q9BV86 223 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 FUNDC2Q9BWH2 189 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 MAF1Q9H063 256 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 TSPYL1Q9H0U9 437 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 TPK1Q9H3S4 243 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 CWC25Q9NXE8 425 aaPredicted RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 HOXC10Q9NYD6 342 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 C6orf203Q9P0P8 240 aaPredicted RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 MBD2Q9UBB5 411 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 NUFIP1Q9UHK0 495 aaKnown RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 ZNF835Q9Y2P0 537 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 CHD3Q12873 2000 aaKnown RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 ZGRF1Q86YA3 2104 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 LYSTQ99698 3801 aa0.92□□□□□ -2.26
LRCH3-209ENST00000452660 PLECQ15149 4684 aaKnown RBP0.92□□□□□ -2.26
LRCH3-209ENST00000452660 ZMYM6O95789 1325 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 PHLPP2Q6ZVD8 1323 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 MYH8P13535 1937 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 FAT4Q6V0I7 4981 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 OBSL1O75147 1896 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 CNTRLQ7Z7A1 2325 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 A0A0J9YVX5 310 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 IQANK1A0A1B0GTG1 560 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 SPECC1L-ADORA2AF8WAN1 911 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 SHOX2O60902 331 aaPredicted RBP0.91□□□□□ -2.26
LRCH3-209ENST00000452660 REC8O95072 547 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 AKR7A3O95154 331 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 CENPBP07199 599 aaPredicted RBP0.91□□□□□ -2.26
LRCH3-209ENST00000452660 MRPL3P09001 348 aaKnown RBP0.91□□□□□ -2.26
LRCH3-209ENST00000452660 CISD3P0C7P0 127 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 SCG2P13521 617 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 RPL4P36578 427 aaKnown RBP0.91□□□□□ -2.26
LRCH3-209ENST00000452660 APOC4P55056 127 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 RND3P61587 244 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 DYNLL1P63167 89 aaKnown RBP0.91□□□□□ -2.26
LRCH3-209ENST00000452660 MGAT3Q09327 533 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 DMC1Q14565 340 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 GPAT3Q53EU6 434 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 CYBRD1Q53TN4 286 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 HIST2H2AA3Q6FI13 130 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 WDR74Q6RFH5 385 aaPredicted RBP0.91□□□□□ -2.26
LRCH3-209ENST00000452660 RABEPKQ7Z6M1 372 aa0.91□□□□□ -2.26
LRCH3-209ENST00000452660 GLRX5Q86SX6 157 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms