RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 MLF1P58340 268 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRPS1P60891 318 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC35A2P78381 396 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF117Q03924 483 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CHAF1BQ13112 559 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMED1Q13445 227 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 DNASE1L3Q13609 305 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 MFSD13AQ14CX5 517 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CD226Q15762 336 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SNAPC1Q16533 368 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 NTRK2Q16620 822 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 NADK2Q4G0N4 442 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 C3orf38Q5JPI3 329 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 FAM69BQ5VUD6 431 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 FOXB2Q5VYV0 432 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 RNLSQ5VYX0 342 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMEM236Q5W0B7 351 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 ACSM5Q6NUN0 579 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMEM81Q6P7N7 255 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 APOOLQ6UXV4 268 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF620Q6ZNG0 422 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 Q6ZPB1 254 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 KCTD8Q6ZWB6 473 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 HIST3H2AQ7L7L0 130 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TIPARPQ7Z3E1 657 aaKnown RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 PPP1R32Q7Z5V6 425 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 GPR141Q7Z602 305 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 ATG4DQ86TL0 474 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 OAFQ86UD1 273 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 MARCH3Q86UD3 253 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 JAZF1Q86VZ6 243 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 RPS19BP1Q86WX3 136 aaKnown RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 KIF18BQ86Y91 864 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCDC71Q8IV32 467 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 GPALPP1Q8IXQ4 340 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SPARTQ8N0X7 666 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 LNX2Q8N448 690 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TCEANCQ8N8B7 351 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 GATSQ8NAP1 163 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR6S1Q8NH40 331 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 C9orf43Q8TAL5 461 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CNIH3Q8TBE1 160 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMEM163Q8TC26 289 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 FANK1Q8TC84 345 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 GPR119Q8TDV5 335 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 THAP3Q8WTV1 239 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 RNF138Q8WVD3 245 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 LIPHQ8WWY8 451 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 ASB15Q8WXK1 588 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 FCGR1BQ92637 280 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 HIST1H2ACQ93077 130 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 HGDQ93099 445 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 KIAA1143Q96AT1 154 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 C3orf49Q96BT1 292 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 DGCR14Q96DF8 476 aaKnown RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 RNF31Q96EP0 1072 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SGTBQ96EQ0 304 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 DTNBP1Q96EV8 351 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SGCZQ96LD1 299 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SAMD8Q96LT4 415 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 IL4I1Q96RQ9 567 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 LMF1Q96S06 567 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 RASL10BQ96S79 203 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 MYCBPQ99417 103 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 GPA33Q99795 319 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 COPS4Q9BT78 406 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 IFT27Q9BW83 186 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TSSK6Q9BXA6 273 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 DPH1Q9BZG8 443 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCDC90BQ9GZT6 254 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 RACGAP1Q9H0H5 632 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 UBQLN3Q9H347 655 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 EGLN3Q9H6Z9 239 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 METTL7AQ9H8H3 244 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CPNE5Q9HCH3 593 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 FKBP14Q9NWM8 211 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TVP23BQ9NYZ1 205 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 KLRF1Q9NZS2 232 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CNIH4Q9P003 139 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 H2AFY2Q9P0M6 372 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 PPP4R1LQ9P1A2 415 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TEKT2Q9UIF3 430 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC6A5Q9Y345 797 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF337Q9Y3M9 751 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 PTPRBP23467 1997 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CEP295Q9C0D2 2601 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 EML6Q6ZMW3 1958 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMED7-TICAM2A0A0A6YYA0 188 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 SPAARA0A1B0GVQ0 90 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 A0A1W2PNU3 283 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 A8MVM7 634 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 KDM4EB2RXH2 506 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 ETV2O00321 342 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 KPNA4O00629 521 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 IMPA2O14732 288 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 SURF4O15260 269 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRODHO43272 600 aa3.6□□□□□ -1.83
HMGB1P37-201ENST00000439613 TLX2O43763 284 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms