RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 HIST1H2ABP04908 130 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 DAOP14920 347 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 ATP5A1P25705 553 aaKnown RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 ERV3-1Q14264 604 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 RBMS2Q15434 407 aaKnown RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 RAB30Q15771 203 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 ALG10BQ5I7T1 473 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 LEG1Q6P5S2 330 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TSSK4Q6SA08 328 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 HIST3H2AQ7L7L0 130 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 SPPL3Q8TCT6 385 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 ST7LQ8TDW4 575 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 HIST1H2ACQ93077 130 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 GAL3ST3Q96A11 431 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TIFAQ96CG3 184 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 RASD2Q96D21 266 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 CXorf40BQ96DE9 158 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 C20orf141Q9NUB4 165 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 MRPL22Q9NWU5 206 aaKnown RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 GMEB2Q9UKD1 530 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TRAPPC4Q9Y296 219 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 EYSQ5T1H1 3165 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 GPANK1O95872 356 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 KNG1P01042 644 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 SERPINA5P05154 406 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TRAPPC2P0DI81 140 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TRAPPC2BP0DI82 140 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 TMIGD3P0DMS9 266 aaPredicted RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 PVRP15151 417 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 PPM1AP35813 382 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 SPOCK1Q08629 439 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 CHAF1BQ13112 559 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 C9orf152Q5JTZ5 239 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 LAS2Q8IYD9 372 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 C12orf45Q8N5I9 185 aaPredicted RBP8.16□□□□□ -1.1
RTN4-206ENST00000394611 OR4C15Q8NGM1 316 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 SPACA5Q96QH8 159 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 PFDN5Q99471 154 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 ENKD1Q9H0I2 346 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 EVA1AQ9H8M9 152 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 EMC7Q9NPA0 242 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 IL36AQ9UHA7 158 aa8.16□□□□□ -1.1
RTN4-206ENST00000394611 C1orf226A1L170 272 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 RCBTB2O95199 551 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 CD160O95971 181 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 CYB5AP00167 134 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 RNH1P13489 461 aaKnown RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 CDK2P24941 298 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 CD34P28906 385 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 SLC6A12P48065 614 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 SEC61A1P61619 476 aaKnown RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 SNRPEP62304 92 aaKnown RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 TLE1Q04724 770 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 PDZK1IP1Q13113 114 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 GPM6BQ13491 265 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 TGIF1Q15583 401 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 RNLSQ5VYX0 342 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 PXT1Q8NFP0 134 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 STEAP2Q8NFT2 490 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 OR2L5Q8NG80 312 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 OR2L3Q8NG85 312 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 BRIX1Q8TDN6 353 aaKnown RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 CA5BP1Q8WTZ4 195 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 TMEM239Q8WW34 195 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 MAFIPQ8WZ33 124 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 CAMK1GQ96NX5 476 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 VRK1Q99986 396 aaPredicted RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 IGFLR1Q9H665 355 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 HRASLSQ9HDD0 168 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 CALML5Q9NZT1 146 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 ZNF230Q9UIE0 474 aaPredicted RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 LAMP5Q9UJQ1 280 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 A4GNTQ9UNA3 340 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 SLC27A6Q9Y2P4 619 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 A0A087WV62 115 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 AGAP14A8MT82 685 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 HIDE1A8MVS5 230 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 MCIDASD6RGH6 385 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 SOX1O00570 391 aaPredicted RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 LCMT2O60294 686 aaKnown RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 SNRPGP62308 76 aaKnown RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 ARFRP1Q13795 201 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 MPP7Q5T2T1 576 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 CD276Q5ZPR3 534 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 SLC25A24Q6NUK1 477 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 TMEM71Q6P5X7 295 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 COMTD1Q86VU5 262 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 TMEM200AQ86VY9 491 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 ZNF683Q8IZ20 524 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 ISOC2Q96AB3 205 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 USB1Q9BQ65 265 aaKnown RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 ZNF649Q9BS31 505 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 TRIM2Q9C040 744 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 SIDT1Q9NXL6 827 aaKnown RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 ASH2LQ9UBL3 628 aa8.15□□□□□ -1.1
RTN4-206ENST00000394611 CGGBP1Q9UFW8 167 aaPredicted RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 HEATR1Q9H583 2144 aaKnown RBP8.15□□□□□ -1.1
RTN4-206ENST00000394611 RAB3DO95716 219 aa8.15□□□□□ -1.11
RTN4-206ENST00000394611 CD2P06729 351 aa8.15□□□□□ -1.11
RTN4-206ENST00000394611 TUBG1P23258 451 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms