RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 TRIM64BA6NI03 449 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 BLOC1S5-TXNDC5H3BN57 136 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 NOL3O60936 208 aaKnown RBP11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 APOL3O95236 402 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 LIFP15018 202 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 IL11P20809 199 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 ENTPD1P49961 510 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 FOXK2Q01167 660 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 FOXF1Q12946 379 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 OCLNQ16625 522 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 DCAF10Q5QP82 559 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 H3F3CQ6NXT2 135 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 RTL4Q6ZR62 310 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 TMPRSS7Q7RTY8 843 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 ARMC10Q8N2F6 343 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 LNX2Q8N448 690 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 FAR1Q8WVX9 515 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 IPCEF1Q8WWN9 437 aaPredicted RBP11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 Q96MT0 163 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 SIGLEC11Q96RL6 698 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 CCNL2Q96S94 520 aaPredicted RBP11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 DOK1Q99704 481 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 FUNDC2Q9BWH2 189 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 C12orf10Q9HB07 376 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 NANSQ9NR45 359 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 SEC14L4Q9UDX3 406 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 ZNF337Q9Y3M9 751 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 ADAM18Q9Y3Q7 739 aa11.05□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC25A12O75746 678 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 CDK1P06493 297 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 DBTP11182 482 aaKnown RBP11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 ZNF182P17025 639 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 AQP2P41181 271 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 NHLH1Q02575 133 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 ZNF91Q05481 1191 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 RPL13AP3Q6NVV1 102 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 PRSS48Q7RTY5 328 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 BEST3Q8N1M1 668 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 STX19Q8N4C7 294 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 MINDY2Q8NBR6 621 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 ANKK1Q8NFD2 765 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 OR2M3Q8NG83 312 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 PAQR8Q8TEZ7 354 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC25A36Q96CQ1 311 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 CCNB1IP1Q9NPC3 277 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 HINT3Q9NQE9 182 aaKnown RBP11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 SDHAF3Q9NRP4 125 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 A0A0G2JMM0 328 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 A0A1W2PPB8 328 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 A0A1W2PRS3 328 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 KIR3DP1A8MWS1 328 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 ZNF99A8MXY4 864 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 NDUFB2O95178 105 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 OPN1LWP04000 364 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 HMGN1P05114 100 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 ITGA3P26006 1051 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 RPL4P36578 427 aaKnown RBP11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC15A1P46059 708 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 ZNF41P51814 821 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC22A10Q63ZE4 541 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 THOC7Q6I9Y2 204 aaKnown RBP11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 B3GLCTQ6Y288 498 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 CPOQ8IVL8 374 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 CYP4Z2PQ8N1L4 340 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 GHDCQ8N2G8 530 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 CYB561A3Q8NBI2 242 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 TMEM234Q8WY98 164 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 MYDGFQ969H8 173 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 JSRP1Q96MG2 331 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 GNRHR2Q96P88 292 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 ERMAPQ96PL5 475 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 PTDSS2Q9BVG9 487 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 TAPBPLQ9BX59 468 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 HCAR1Q9BXC0 346 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 TEX12Q9BXU0 123 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 PRRG3Q9BZD7 231 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 SH2D2AQ9NP31 389 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 KLHL1Q9NR64 748 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 IER3IP1Q9Y5U9 82 aa11.04□□□□□ -0.64
SPTBN1-203ENST00000389980 NCKAP5O14513 1909 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 IGLV3-32A0A0A0MS00 114 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 EFNA2O43921 213 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 LCKP06239 509 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 ASAH2BP0C7U1 165 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 NOS3P29474 1203 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC6A6P31641 620 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 GRK5P34947 590 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 SUMO3P55854 103 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 LSM3P62310 102 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 RPS4XP62701 263 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 ERVK-25P63136 954 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 PLPPR5Q32ZL2 321 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC25A30Q5SVS4 291 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 ZNF362Q5T0B9 420 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 PLBD1Q6P4A8 553 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 SHFQ7M4L6 423 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 OR4K17Q8NGC6 315 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 POC1BQ8TC44 478 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms