RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CMSS1Q9BQ75 279 aaKnown RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 SLC12A9Q9BXP2 914 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ZNF331Q9NQX6 463 aaPredicted RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 MRPL33O75394 65 aaKnown RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 RAB3DO95716 219 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 NTF3P20783 257 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 NDUFAF5Q5TEU4 345 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 CNTN4Q8IWV2 1026 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 OR4K5Q8NGD3 323 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 TMEM19Q96HH6 336 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ZBED3Q96IU2 234 aaPredicted RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 FEVQ99581 238 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ALG12Q9BV10 488 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 XYLT2Q9H1B5 865 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 IKZF5Q9H5V7 419 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ZNF696Q9H7X3 374 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 FBXO24O75426 580 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 THBS1P07996 1170 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 RPA2P15927 270 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 UGT2B7P16662 529 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 DEFB110Q30KQ9 67 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 CPXM2Q8N436 756 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 KATNB1Q9BVA0 655 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ATP23Q9Y6H3 246 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 PTBP3O95758 552 aaKnown RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 OR5H8P0DN80 308 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 GPR148Q8TDV2 347 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 HSD17B8Q92506 261 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 PURGQ9UJV8 347 aaKnown RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 GGT1P19440 569 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 AADACP22760 399 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 RFC3P40938 356 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 RTL10Q7L3V2 364 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 CATSPERDQ86XM0 798 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 ANKMY1Q9P2S6 941 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 SPO11Q9Y5K1 396 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 C10orf71Q711Q0 1435 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 SNAI1O95863 264 aaPredicted RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 TRIM23P36406 574 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 KCNJ15Q99712 375 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 QPCTLQ9NXS2 382 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 GIMAP2Q9UG22 337 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 ANKRD61A6NGH8 418 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 BCAT2O15382 392 aaPredicted RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 DENRO43583 198 aaKnown RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 CLIC3O95833 236 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 GCGP01275 180 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 HLA-HP01893 362 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 PSMB2P49721 201 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 BEX5Q5H9J7 111 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 CCBE1Q6UXH8 406 aaPredicted RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 COMMD6Q7Z4G1 85 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 NSUN5Q96P11 429 aaKnown RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 FCRL3Q96P31 734 aaPredicted RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 PINK1Q9BXM7 581 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 TXNRD2Q9NNW7 524 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 TM7SF3Q9NS93 570 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 LUZP4Q9P127 313 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 CDC14CA4D256 554 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 METTL15A6NJ78 407 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 FBXO45P0C2W1 286 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 IQCF3P0C7M6 154 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 CDK4P11802 303 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 DPP4P27487 766 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 RRADP55042 308 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 KIR2DS3Q14952 304 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 NOXA1Q86UR1 476 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 IGDCC3Q8IVU1 814 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 OR51L1Q8NGJ5 315 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 ZNF596Q8TC21 504 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 IGSF8Q969P0 613 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 NAGKQ9UJ70 344 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 HELTA6NFD8 242 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 SLC7A9P82251 487 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 NHSL2Q5HYW2 709 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 CBARPQ8N350 705 aaPredicted RBP11.28□□□□□ -0.6
PCF11-201ENST00000298281 VWA5B2Q8N398 1253 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 FAM213BQ8TBF2 198 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 TECTBQ96PL2 329 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 INTS14Q96SY0 518 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 PSD2Q9BQI7 771 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 C12orf49Q9H741 205 aa11.28□□□□□ -0.6
PCF11-201ENST00000298281 ITGB8P26012 769 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 GALEQ14376 348 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 MICAQ29983 383 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 C6orf89Q6UWU4 347 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 KDM8Q8N371 416 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 SYNPRQ8TBG9 265 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 FOXN4Q96NZ1 517 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 SOX17Q9H6I2 414 aaPredicted RBP11.27□□□□□ -0.6
PCF11-201ENST00000298281 SLC22A7Q9Y694 548 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 A3GALT2U3KPV4 340 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 PRAMEF4O60810 478 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 CSF1P09603 554 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 MAP2K4P45985 399 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms