RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SEM1Q6ZVN7 128 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 TMPRSS11FQ6ZWK6 438 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 CHMP1BQ7LBR1 199 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 P3H2Q8IVL5 708 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 NRMQ8IXM6 262 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 OR4K5Q8NGD3 323 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 PFN4Q8NHR9 129 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 RNF217Q8TC41 542 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 ZHX1-C8orf76Q96EF9 292 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 ZFP3Q96NJ6 502 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 ALPK1Q96QP1 1244 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 TTYH2Q9BSA4 534 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 TAPBPLQ9BX59 468 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 REEP1Q9H902 201 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 RNF122Q9H9V4 155 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 NTN4Q9HB63 628 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 FANCFQ9NPI8 374 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 MRPL39Q9NYK5 338 aaKnown RBP12.62□□□□□ -0.39
VPS25-201ENST00000253794 ZNF229Q9UJW7 825 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 TMEM5Q9Y2B1 443 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 MEMO1Q9Y316 297 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 MYO18BQ8IUG5 2567 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 A0A1B0GUH1 482 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 LOC102725191A0A1B0GVB3 256 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 SLC22A20A6NK97 555 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 ENO4A6NNW6 628 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 TNFRSF11BO00300 401 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 KLF4O43474 513 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 CYTIPO60759 359 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 TIPRLO75663 272 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 SYNGR4O95473 234 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 TGM6O95932 706 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 ASAH2BP0C7U1 165 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 FPR1P21462 350 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 ENPP1P22413 925 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 FASP25445 335 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 DNAJA1P31689 397 aaKnown RBP12.61□□□□□ -0.39
VPS25-201ENST00000253794 CEACAM8P31997 349 aaPredicted RBP12.61□□□□□ -0.39
VPS25-201ENST00000253794 OMPP47874 163 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 UQCRFS1P47985 274 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 SLC16A1P53985 500 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 OR2B6P58173 313 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 LSM11P83369 360 aaKnown RBP eCLIP12.61□□□□□ -0.39
VPS25-201ENST00000253794 GUSBP1Q15486 140 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 OR7A5Q15622 319 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 SGCBQ16585 318 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 EXOC3L2Q2M3D2 409 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 EIF2S3LQ2VIR3 472 aaKnown RBP12.61□□□□□ -0.39
VPS25-201ENST00000253794 ANKDD1AQ495B1 522 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 RIPPLY2Q5TAB7 128 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 TMEM211Q6ICI0 200 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 ZNF770Q6IQ21 691 aaPredicted RBP12.61□□□□□ -0.39
VPS25-201ENST00000253794 RPTNQ6XPR3 784 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 LSRQ86X29 649 aaPredicted RBP12.61□□□□□ -0.39
VPS25-201ENST00000253794 SLC43A2Q8N370 569 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 OR52J3Q8NH60 311 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 FNDC9Q8TBE3 224 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 PYDC1Q8WXC3 89 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 BPIFA2Q96DR5 249 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 SGTBQ96EQ0 304 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 NRBF2Q96F24 287 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 MOGAT1Q96PD6 335 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 TRIB1Q96RU8 372 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 TM9SF2Q99805 663 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 C20orf141Q9NUB4 165 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 TMCC3Q9ULS5 477 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 B3GALT5Q9Y2C3 310 aa12.61□□□□□ -0.39
VPS25-201ENST00000253794 SAMHD1Q9Y3Z3 626 aaKnown RBP12.61□□□□□ -0.39
VPS25-201ENST00000253794 IGKV3D-15A0A087WSY6 115 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 TRGV8A0A0C4DH27 118 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 ZNF716A6NP11 495 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 KDM4EB2RXH2 506 aaPredicted RBP12.6□□□□□ -0.39
VPS25-201ENST00000253794 PIP5K1CO60331 668 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 OR7A10O76100 309 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 TOXO94900 526 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 VAMP5O95183 116 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 RCBTB2O95199 551 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 LDLRP01130 860 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 CRHP06850 196 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 GLI4P10075 376 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 PLA2G2AP14555 144 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 GRPRP30550 384 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 SLC9A3P48764 834 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 RPS4XP62701 263 aaKnown RBP12.6□□□□□ -0.39
VPS25-201ENST00000253794 RNPS1Q15287 305 aaKnown RBP12.6□□□□□ -0.39
VPS25-201ENST00000253794 POU4F3Q15319 338 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 C4orf17Q53FE4 359 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 OR2A2Q6IF42 318 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 C1orf94Q6P1W5 598 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 TBPL2Q6SJ96 375 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 FCRLAQ7L513 359 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 MAMDC2Q7Z304 686 aaPredicted RBP12.6□□□□□ -0.39
VPS25-201ENST00000253794 RPRMLQ8N4K4 120 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 MARVELD2Q8N4S9 558 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 PIGXQ8TBF5 258 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 NAA11Q9BSU3 229 aaPredicted RBP12.6□□□□□ -0.39
VPS25-201ENST00000253794 SF3B5Q9BWJ5 86 aaKnown RBP12.6□□□□□ -0.39
VPS25-201ENST00000253794 BCO1Q9HAY6 547 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 S100A14Q9HCY8 104 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 CHST11Q9NPF2 352 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms