RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
PHGDH-224ENST00000641711 GCKRQ14397 625 aa12.75□□□□□ -0.37
PHGDH-224ENST00000641711 CRY2Q49AN0 593 aa12.75□□□□□ -0.37
PHGDH-224ENST00000641711 F6X3S4 739 aa12.74□□□□□ -0.37
PHGDH-224ENST00000641711 H0YIN7 160 aa12.74□□□□□ -0.37
PHGDH-224ENST00000641711 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
PHGDH-224ENST00000641711 NLRP3Q96P20 1036 aa12.74□□□□□ -0.37
PHGDH-224ENST00000641711 PLA2G12BQ9BX93 195 aa12.74□□□□□ -0.37
PHGDH-224ENST00000641711 HDAC5Q9UQL6 1122 aa12.74□□□□□ -0.37
PHGDH-224ENST00000641711 RTL9Q8NET4 1388 aa12.73□□□□□ -0.37
PHGDH-224ENST00000641711 UTYO14607 1347 aa12.73□□□□□ -0.37
PHGDH-224ENST00000641711 H7C1W4 665 aa12.73□□□□□ -0.37
PHGDH-224ENST00000641711 NPR1P16066 1061 aa12.73□□□□□ -0.37
PHGDH-224ENST00000641711 ERFEQ4G0M1 354 aa12.73□□□□□ -0.37
PHGDH-224ENST00000641711 SIRT2Q8IXJ6 389 aa12.73□□□□□ -0.37
PHGDH-224ENST00000641711 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
PHGDH-224ENST00000641711 CACNA1SQ13698 1873 aa12.72□□□□□ -0.37
PHGDH-224ENST00000641711 GRM8O00222 908 aa12.72□□□□□ -0.37
PHGDH-224ENST00000641711 IRS4O14654 1257 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-224ENST00000641711 PDE8AO60658 829 aa12.72□□□□□ -0.37
PHGDH-224ENST00000641711 SRGNP10124 158 aa12.72□□□□□ -0.37
PHGDH-224ENST00000641711 SF3B3Q15393 1217 aaKnown RBP12.72□□□□□ -0.37
PHGDH-224ENST00000641711 CWF19L2Q2TBE0 894 aaKnown RBP12.72□□□□□ -0.37
PHGDH-224ENST00000641711 SLC4A10Q6U841 1118 aa12.72□□□□□ -0.37
PHGDH-224ENST00000641711 CHD1LQ86WJ1 897 aa12.72□□□□□ -0.37
PHGDH-224ENST00000641711 NUTM1Q86Y26 1132 aa12.72□□□□□ -0.37
PHGDH-224ENST00000641711 RPAP2Q8IXW5 612 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-224ENST00000641711 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
PHGDH-224ENST00000641711 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
PHGDH-224ENST00000641711 SRCAPQ6ZRS2 3230 aa12.71□□□□□ -0.37
PHGDH-224ENST00000641711 FAM177BA6PVY3 158 aa12.71□□□□□ -0.37
PHGDH-224ENST00000641711 HOXA10P31260 410 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-224ENST00000641711 CASP7P55210 303 aa12.71□□□□□ -0.37
PHGDH-224ENST00000641711 C2CD5Q86YS7 1000 aa12.71□□□□□ -0.37
PHGDH-224ENST00000641711 ANKRD44Q8N8A2 993 aa12.71□□□□□ -0.37
PHGDH-224ENST00000641711 NLGN2Q8NFZ4 835 aa12.71□□□□□ -0.37
PHGDH-224ENST00000641711 FAM89AQ96GI7 184 aa12.71□□□□□ -0.37
PHGDH-224ENST00000641711 C9orf78Q9NZ63 289 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-224ENST00000641711 PIM2Q9P1W9 311 aa12.71□□□□□ -0.37
PHGDH-224ENST00000641711 DPEP1P16444 411 aa12.7□□□□□ -0.38
PHGDH-224ENST00000641711 ALDH1B1P30837 517 aa12.7□□□□□ -0.38
PHGDH-224ENST00000641711 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
PHGDH-224ENST00000641711 UBE3BQ7Z3V4 1068 aa12.7□□□□□ -0.38
PHGDH-224ENST00000641711 TMC4Q7Z404 712 aa12.7□□□□□ -0.38
PHGDH-224ENST00000641711 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
PHGDH-224ENST00000641711 CRAMP1Q96RY5 1269 aa12.7□□□□□ -0.38
PHGDH-224ENST00000641711 DCTPP1Q9H773 170 aa12.7□□□□□ -0.38
PHGDH-224ENST00000641711 C1orf115Q9H7X2 142 aa12.7□□□□□ -0.38
PHGDH-224ENST00000641711 LRRC37AA6NMS7 1700 aa12.7□□□□□ -0.38
PHGDH-224ENST00000641711 DCAF8L1A6NGE4 600 aa12.69□□□□□ -0.38
PHGDH-224ENST00000641711 KCNA3P22001 575 aa12.69□□□□□ -0.38
PHGDH-224ENST00000641711 CCDC152Q4G0S7 254 aa12.69□□□□□ -0.38
PHGDH-224ENST00000641711 TTLL6Q8N841 843 aa12.69□□□□□ -0.38
PHGDH-224ENST00000641711 RBM17Q96I25 401 aaKnown RBP12.69□□□□□ -0.38
PHGDH-224ENST00000641711 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
PHGDH-224ENST00000641711 CHD4Q14839 1912 aa12.68□□□□□ -0.38
PHGDH-224ENST00000641711 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
PHGDH-224ENST00000641711 SEC24BO95487 1268 aa12.68□□□□□ -0.38
PHGDH-224ENST00000641711 GNAI3P08754 354 aa12.68□□□□□ -0.38
PHGDH-224ENST00000641711 HCLS1P14317 486 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-224ENST00000641711 CTSWP56202 376 aa12.68□□□□□ -0.38
PHGDH-224ENST00000641711 GRIPAP1Q4V328 841 aa12.68□□□□□ -0.38
PHGDH-224ENST00000641711 DALRD3Q5D0E6 543 aaKnown RBP12.68□□□□□ -0.38
PHGDH-224ENST00000641711 CC2D2BQ6DHV5 1058 aa12.68□□□□□ -0.38
PHGDH-224ENST00000641711 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
PHGDH-224ENST00000641711 DDX46Q7L014 1031 aaKnown RBP12.68□□□□□ -0.38
PHGDH-224ENST00000641711 A0A0G2JLW4 131 aa12.67□□□□□ -0.38
PHGDH-224ENST00000641711 GRIN3BO60391 1043 aa12.67□□□□□ -0.38
PHGDH-224ENST00000641711 CHRNA5P30532 468 aa12.67□□□□□ -0.38
PHGDH-224ENST00000641711 BMP2KLQ5H9B9 411 aa12.67□□□□□ -0.38
PHGDH-224ENST00000641711 ANKRD45Q5TZF3 282 aa12.67□□□□□ -0.38
PHGDH-224ENST00000641711 LNPKQ9C0E8 428 aa12.67□□□□□ -0.38
PHGDH-224ENST00000641711 USP44Q9H0E7 712 aa12.67□□□□□ -0.38
PHGDH-224ENST00000641711 UPF2Q9HAU5 1272 aaKnown RBP12.67□□□□□ -0.38
PHGDH-224ENST00000641711 CSF1RP07333 972 aa12.66□□□□□ -0.38
PHGDH-224ENST00000641711 UBTFL1P0CB47 393 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-224ENST00000641711 GRAPQ13588 217 aa12.66□□□□□ -0.38
PHGDH-224ENST00000641711 RABL6Q3YEC7 729 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-224ENST00000641711 CCDC24Q8N4L8 307 aa12.66□□□□□ -0.38
PHGDH-224ENST00000641711 GRAPLQ8TC17 118 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-224ENST00000641711 ZNF622Q969S3 477 aaKnown RBP eCLIP12.66□□□□□ -0.383e-9■■■□□ 17.8
PHGDH-224ENST00000641711 TBC1D32Q96NH3 1257 aa12.66□□□□□ -0.38
PHGDH-224ENST00000641711 CDC5LQ99459 802 aaKnown RBP12.66□□□□□ -0.38
PHGDH-224ENST00000641711 MEIS3Q99687 375 aa12.66□□□□□ -0.38
PHGDH-224ENST00000641711 BBOX1O75936 387 aa12.65□□□□□ -0.38
PHGDH-224ENST00000641711 PRPF40BQ6NWY9 871 aaKnown RBP12.65□□□□□ -0.38
PHGDH-224ENST00000641711 SYNE4Q8N205 404 aa12.65□□□□□ -0.38
PHGDH-224ENST00000641711 TTLL11Q8NHH1 800 aa12.65□□□□□ -0.38
PHGDH-224ENST00000641711 LTBP3Q9NS15 1303 aa12.64□□□□□ -0.39
PHGDH-224ENST00000641711 HMMRO75330 724 aa12.64□□□□□ -0.39
PHGDH-224ENST00000641711 GNAI2P04899 355 aa12.64□□□□□ -0.39
PHGDH-224ENST00000641711 NBPF7P0C2Y1 421 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-224ENST00000641711 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-224ENST00000641711 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
PHGDH-224ENST00000641711 TMX4Q9H1E5 349 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-224ENST00000641711 BCS1LQ9Y276 419 aa12.64□□□□□ -0.39
PHGDH-224ENST00000641711 DICER1Q9UPY3 1922 aaKnown RBP12.64□□□□□ -0.39
PHGDH-224ENST00000641711 TAF1P21675 1872 aa12.63□□□□□ -0.39
PHGDH-224ENST00000641711 SNED1Q8TER0 1413 aa12.63□□□□□ -0.39
PHGDH-224ENST00000641711 SPEF2Q9C093 1822 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms