RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 STARD3NLO95772 234 aa8.68□□□□□ -1.02
BRCA1-230ENST00000634433 THRAP3Q9Y2W1 955 aaKnown RBP8.68□□□□□ -1.02
BRCA1-230ENST00000634433 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-230ENST00000634433 K7ELQ4 463 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-230ENST00000634433 ST18O60284 1047 aa8.68□□□□□ -1.02
BRCA1-230ENST00000634433 PTCD1O75127 700 aaKnown RBP8.68□□□□□ -1.02
BRCA1-230ENST00000634433 PI4K2BQ8TCG2 481 aa8.68□□□□□ -1.02
BRCA1-230ENST00000634433 SECISBP2LQ93073 1101 aaKnown RBP8.68□□□□□ -1.02
BRCA1-230ENST00000634433 KAZALD1Q96I82 304 aa8.68□□□□□ -1.02
BRCA1-230ENST00000634433 ECHDC1Q9NTX5 307 aa8.68□□□□□ -1.02
BRCA1-230ENST00000634433 CWC25Q9NXE8 425 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-230ENST00000634433 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
BRCA1-230ENST00000634433 KCPQ6ZWJ8 1503 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 A0A087WZG4 1122 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 HSP90AA1P07900 732 aaKnown RBP8.67□□□□□ -1.02
BRCA1-230ENST00000634433 NBPF14Q5TI25 921 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 TSHZ3Q63HK5 1081 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 NBPF10Q6P3W6 841 aaKnown RBP8.67□□□□□ -1.02
BRCA1-230ENST00000634433 NBPF15Q8N660 670 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 CCDC191Q8NCU4 936 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 RUFY2Q8WXA3 655 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 COPRSQ9NQ92 184 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 RGPD3A6NKT7 1758 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-230ENST00000634433 RGPD4Q7Z3J3 1758 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 UBR2Q8IWV8 1755 aa8.67□□□□□ -1.02
BRCA1-230ENST00000634433 H7C1W4 665 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 A1BGP04217 495 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 RABL6Q3YEC7 729 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-230ENST00000634433 KRT27Q7Z3Y8 459 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 EVI5LQ96CN4 794 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 SPATA32Q96LK8 384 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 PPP1R1BQ9UD71 204 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-230ENST00000634433 PA2G4Q9UQ80 394 aaKnown RBP8.66□□□□□ -1.02
BRCA1-230ENST00000634433 PAPPAQ13219 1627 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 DCAF8L1A6NGE4 600 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 HIP1O00291 1037 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 MCM2P49736 904 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 AACSQ86V21 672 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 PIGBQ92521 554 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 THSD7AQ9UPZ6 1657 aa8.66□□□□□ -1.02
BRCA1-230ENST00000634433 ATP5J2-PTCD1G3V325 749 aa8.65□□□□□ -1.02
BRCA1-230ENST00000634433 PIP4K2AP48426 406 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-230ENST00000634433 KIF6Q6ZMV9 814 aa8.65□□□□□ -1.02
BRCA1-230ENST00000634433 UBE3BQ7Z3V4 1068 aa8.65□□□□□ -1.02
BRCA1-230ENST00000634433 SEPT12Q8IYM1 358 aa8.65□□□□□ -1.02
BRCA1-230ENST00000634433 SHANK3Q9BYB0 1731 aa8.65□□□□□ -1.02
BRCA1-230ENST00000634433 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
BRCA1-230ENST00000634433 TTLL7Q6ZT98 887 aa8.65□□□□□ -1.02
BRCA1-230ENST00000634433 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.02
BRCA1-230ENST00000634433 SASH1O94885 1247 aa8.64□□□□□ -1.03
BRCA1-230ENST00000634433 ANO2Q9NQ90 1003 aa8.64□□□□□ -1.03
BRCA1-230ENST00000634433 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
BRCA1-230ENST00000634433 FRAT2O75474 233 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-230ENST00000634433 CASP7P55210 303 aa8.64□□□□□ -1.03
BRCA1-230ENST00000634433 HSP90AB3PQ58FF7 597 aa8.64□□□□□ -1.03
BRCA1-230ENST00000634433 RBM42Q9BTD8 480 aaKnown RBP8.64□□□□□ -1.03
BRCA1-230ENST00000634433 DIAPH3Q9NSV4 1193 aa8.64□□□□□ -1.03
BRCA1-230ENST00000634433 ASAP1Q9ULH1 1129 aa8.64□□□□□ -1.03
BRCA1-230ENST00000634433 ARFGEF2Q9Y6D5 1785 aa8.64□□□□□ -1.03
BRCA1-230ENST00000634433 RFX5P48382 616 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-230ENST00000634433 PTPN12Q05209 780 aaKnown RBP8.63□□□□□ -1.03
BRCA1-230ENST00000634433 TCIRG1Q13488 830 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 EPHA10Q5JZY3 1008 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 EXOC8Q8IYI6 725 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 IL17RAQ96F46 866 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 SIL1Q9H173 461 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 SGSM2O43147 1006 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 PTMSP20962 102 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 LMBR1LQ6UX01 489 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 DNAJC10Q8IXB1 793 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 TMTC2Q8N394 836 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 ISCA1Q9BUE6 129 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 ZBTB3Q9H5J0 574 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 PPME1Q9Y570 386 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 SPATA31A1Q5TZJ5 1347 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 BCL9O00512 1426 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 NUP188Q5SRE5 1749 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 TUBGCP6Q96RT7 1819 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 CHD4Q14839 1912 aa8.63□□□□□ -1.03
BRCA1-230ENST00000634433 AFDNP55196 1824 aaKnown RBP8.63□□□□□ -1.03
BRCA1-230ENST00000634433 MAP4K4O95819 1239 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-230ENST00000634433 DDIT3P35638 169 aa8.62□□□□□ -1.03
BRCA1-230ENST00000634433 DEKP35659 375 aaKnown RBP8.62□□□□□ -1.03
BRCA1-230ENST00000634433 DDB1Q16531 1140 aa8.62□□□□□ -1.03
BRCA1-230ENST00000634433 GIMAP6Q6P9H5 292 aa8.62□□□□□ -1.03
BRCA1-230ENST00000634433 DEFB132Q7Z7B7 95 aa8.62□□□□□ -1.03
BRCA1-230ENST00000634433 EAF2Q96CJ1 260 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-230ENST00000634433 YY1P25490 414 aa8.62□□□□□ -1.03
BRCA1-230ENST00000634433 FOXO4P98177 505 aa8.62□□□□□ -1.03
BRCA1-230ENST00000634433 GPATCH11Q8N954 259 aa8.62□□□□□ -1.03
BRCA1-230ENST00000634433 CCDC8Q9H0W5 538 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-230ENST00000634433 GPR108Q9NPR9 543 aa8.62□□□□□ -1.03
BRCA1-230ENST00000634433 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
BRCA1-230ENST00000634433 IL15P40933 162 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-230ENST00000634433 CHMP3Q9Y3E7 222 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 TOGARAM1Q9Y4F4 1720 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 MAP3K15Q6ZN16 1313 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 RAD50Q92878 1312 aa8.61□□□□□ -1.03
BRCA1-230ENST00000634433 CD2BP2O95400 341 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms