RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 HMG20BQ9P0W2 317 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 COMMD10Q9Y6G5 202 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 ALDH1L1O75891 902 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 LMOD1P29536 600 aaPredicted RBP16.27■□□□□ 0.2
UBE3A-220ENST00000630424 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.2
UBE3A-220ENST00000630424 UBXN4Q92575 508 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 TCHPQ9BT92 498 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 GDPD2Q9HCC8 539 aa16.27■□□□□ 0.2
UBE3A-220ENST00000630424 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.19
UBE3A-220ENST00000630424 KIF4BQ2VIQ3 1234 aa16.27■□□□□ 0.19
UBE3A-220ENST00000630424 CCDC102AQ96A19 550 aa16.27■□□□□ 0.19
UBE3A-220ENST00000630424 TCEANC2Q96MN5 208 aa16.27■□□□□ 0.19
UBE3A-220ENST00000630424 EYA3Q99504 573 aa16.27■□□□□ 0.19
UBE3A-220ENST00000630424 CCDC178Q5BJE1 867 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 BRPF3Q9ULD4 1205 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 JAG2Q9Y219 1238 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 GOLGA6L7A0A1B0GV03 622 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 SMARCC2Q8TAQ2 1214 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 KIAA0754O94854 1291 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 MMRN2Q9H8L6 949 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 BIN2Q9UBW5 565 aaPredicted RBP16.26■□□□□ 0.19
UBE3A-220ENST00000630424 PPIP5K1Q6PFW1 1433 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 STX6O43752 255 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 USO1O60763 962 aaKnown RBP16.26■□□□□ 0.19
UBE3A-220ENST00000630424 TRAPPC3LQ5T215 181 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 CCDC183Q5T5S1 534 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 STK32BQ9NY57 414 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 WDR7Q9Y4E6 1490 aa16.26■□□□□ 0.19
UBE3A-220ENST00000630424 TEX14Q8IWB6 1497 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 GNAQP50148 359 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 TMTC2Q8N394 836 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 CTAGE5O15320 804 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 YEATS4O95619 227 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 MCM9Q9NXL9 1143 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 GJA3Q9Y6H8 435 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 ZSCAN12O43309 604 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 KIF5CO60282 957 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 LINS1Q8NG48 757 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 RIMS2Q9UQ26 1411 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 ISM2Q6H9L7 571 aa16.25■□□□□ 0.19
UBE3A-220ENST00000630424 DCAF5Q96JK2 942 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 PLCD4Q9BRC7 762 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 CNNM2Q9H8M5 875 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 ASXL2Q76L83 1435 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 TMCO5BA8MYB1 307 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
UBE3A-220ENST00000630424 PSMD1Q99460 953 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 IL16Q14005 1332 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 B4DLN1 442 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 MRPL12P52815 198 aaKnown RBP16.24■□□□□ 0.19
UBE3A-220ENST00000630424 RTN1Q16799 776 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 CCDC102BQ68D86 513 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 PAFAH1B1P43034 410 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 RBM10P98175 930 aaKnown RBP16.24■□□□□ 0.19
UBE3A-220ENST00000630424 CRACR2AQ9BSW2 395 aa16.24■□□□□ 0.19
UBE3A-220ENST00000630424 PA2G4Q9UQ80 394 aaKnown RBP16.24■□□□□ 0.19
UBE3A-220ENST00000630424 NAPAP54920 295 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 MIGA1Q8NAN2 632 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 SBNO2Q9Y2G9 1366 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 PLCG2P16885 1265 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 DYDC1Q8WWB3 177 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 LRRC27Q9C0I9 530 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 CCNL1Q9UK58 526 aaPredicted RBP16.23■□□□□ 0.19
UBE3A-220ENST00000630424 MAGEB6P1A0A0J9YX57 407 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 PCF11O94913 1555 aaKnown RBP16.23■□□□□ 0.19
UBE3A-220ENST00000630424 RBM25P49756 843 aaKnown RBP16.23■□□□□ 0.19
UBE3A-220ENST00000630424 BMP2KLQ5H9B9 411 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 PHACTR2O75167 634 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 NOP2P46087 812 aaKnown RBP16.23■□□□□ 0.19
UBE3A-220ENST00000630424 PRPF4BQ13523 1007 aaKnown RBP16.23■□□□□ 0.19
UBE3A-220ENST00000630424 DHX37Q8IY37 1157 aaKnown RBP16.23■□□□□ 0.19
UBE3A-220ENST00000630424 C8orf58Q8NAV2 365 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 PLEKHH1Q9ULM0 1364 aa16.23■□□□□ 0.19
UBE3A-220ENST00000630424 SSFA2P28290 1259 aa16.22■□□□□ 0.19
UBE3A-220ENST00000630424 PYM1Q9BRP8 204 aaKnown RBP16.22■□□□□ 0.19
UBE3A-220ENST00000630424 ZNF408Q9H9D4 720 aa16.22■□□□□ 0.19
UBE3A-220ENST00000630424 C6orf50Q9HD87 102 aa16.22■□□□□ 0.19
UBE3A-220ENST00000630424 DDX19AQ9NUU7 478 aaKnown RBP16.22■□□□□ 0.19
UBE3A-220ENST00000630424 CWF19L2Q2TBE0 894 aaKnown RBP16.22■□□□□ 0.19
UBE3A-220ENST00000630424 CNBD1Q8NA66 436 aa16.22■□□□□ 0.19
UBE3A-220ENST00000630424 PTPN23Q9H3S7 1636 aa16.22■□□□□ 0.19
UBE3A-220ENST00000630424 URI1O94763 535 aaPredicted RBP16.22■□□□□ 0.19
UBE3A-220ENST00000630424 LDHBP07195 334 aaKnown RBP16.22■□□□□ 0.19
UBE3A-220ENST00000630424 PTPN14Q15678 1187 aa16.22■□□□□ 0.19
UBE3A-220ENST00000630424 TTC22Q5TAA0 569 aa16.22■□□□□ 0.19
UBE3A-220ENST00000630424 NECAB1Q8N987 351 aa16.22■□□□□ 0.19
UBE3A-220ENST00000630424 TRIM47Q96LD4 638 aa16.22■□□□□ 0.19
UBE3A-220ENST00000630424 ALG1Q9BT22 464 aa16.22■□□□□ 0.19
UBE3A-220ENST00000630424 MCMDC2Q4G0Z9 681 aa16.21■□□□□ 0.19
UBE3A-220ENST00000630424 EXOC1Q9NV70 894 aa16.21■□□□□ 0.19
UBE3A-220ENST00000630424 POLKQ9UBT6 870 aa16.21■□□□□ 0.19
UBE3A-220ENST00000630424 FLT4P35916 1363 aa16.21■□□□□ 0.19
UBE3A-220ENST00000630424 SPDYE3A6NKU9 549 aa16.21■□□□□ 0.19
UBE3A-220ENST00000630424 SYNCQ9H7C4 482 aa16.21■□□□□ 0.19
UBE3A-220ENST00000630424 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
UBE3A-220ENST00000630424 PLCH2O75038 1416 aa16.21■□□□□ 0.19
UBE3A-220ENST00000630424 CALM1P0DP23 149 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms