RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ZNF277Q9NRM2 450 aaPredicted RBP28.57■■■□□ 2.16
SF1-220ENST00000626028 CDHR2Q9BYE9 1310 aa28.57■■■□□ 2.16
SF1-220ENST00000626028 FKBP5Q13451 457 aaPredicted RBP28.56■■■□□ 2.16
SF1-220ENST00000626028 C16orf71Q8IYS4 520 aaPredicted RBP28.56■■■□□ 2.16
SF1-220ENST00000626028 PDE8AO60658 829 aa28.55■■■□□ 2.16
SF1-220ENST00000626028 IGKV5-2P06315 115 aa28.55■■■□□ 2.16
SF1-220ENST00000626028 SUPT20HQ8NEM7 779 aa28.55■■■□□ 2.16
SF1-220ENST00000626028 RBM46Q8TBY0 533 aaKnown RBP28.55■■■□□ 2.16
SF1-220ENST00000626028 RRAGCQ9HB90 399 aa28.55■■■□□ 2.16
SF1-220ENST00000626028 ZNF428Q96B54 188 aa28.54■■■□□ 2.16
SF1-220ENST00000626028 RTFDC1Q9BY42 306 aaPredicted RBP28.54■■■□□ 2.16
SF1-220ENST00000626028 NEURL1BA8MQ27 555 aa28.53■■■□□ 2.16
SF1-220ENST00000626028 RTL5Q5HYW3 569 aaPredicted RBP28.53■■■□□ 2.16
SF1-220ENST00000626028 DIEXFQ68CQ4 756 aaKnown RBP28.53■■■□□ 2.16
SF1-220ENST00000626028 DNAAF4Q8WXU2 420 aa28.53■■■□□ 2.16
SF1-220ENST00000626028 JDP2Q8WYK2 163 aa28.53■■■□□ 2.16
SF1-220ENST00000626028 FZD9O00144 591 aa28.52■■■□□ 2.16
SF1-220ENST00000626028 LINS1Q8NG48 757 aa28.52■■■□□ 2.16
SF1-220ENST00000626028 SLFN5Q08AF3 891 aa28.51■■■□□ 2.15
SF1-220ENST00000626028 CCDC152Q4G0S7 254 aa28.51■■■□□ 2.15
SF1-220ENST00000626028 L3MBTL3Q96JM7 780 aaPredicted RBP28.5■■■□□ 2.15
SF1-220ENST00000626028 FSTL1Q12841 308 aa28.49■■■□□ 2.15
SF1-220ENST00000626028 DPP8Q6V1X1 898 aaPredicted RBP28.49■■■□□ 2.15
SF1-220ENST00000626028 MPNDQ8N594 471 aa28.49■■■□□ 2.15
SF1-220ENST00000626028 RPS8P62241 208 aaKnown RBP28.48■■■□□ 2.15
SF1-220ENST00000626028 GCKRQ14397 625 aa28.48■■■□□ 2.15
SF1-220ENST00000626028 CWF19L2Q2TBE0 894 aaKnown RBP28.48■■■□□ 2.15
SF1-220ENST00000626028 LTBP1Q14766 1721 aa28.48■■■□□ 2.15
SF1-220ENST00000626028 IQCA1LA6NCM1 817 aa28.47■■■□□ 2.15
SF1-220ENST00000626028 H7C1W4 665 aa28.47■■■□□ 2.15
SF1-220ENST00000626028 LARGE2Q8N3Y3 721 aa28.47■■■□□ 2.15
SF1-220ENST00000626028 DDNO94850 711 aaPredicted RBP28.46■■■□□ 2.15
SF1-220ENST00000626028 HSPA6P17066 643 aa28.46■■■□□ 2.15
SF1-220ENST00000626028 TRMT2AQ8IZ69 625 aaKnown RBP28.46■■■□□ 2.15
SF1-220ENST00000626028 CELF1Q92879 486 aaKnown RBP28.46■■■□□ 2.15
SF1-220ENST00000626028 RTL9Q8NET4 1388 aa28.46■■■□□ 2.15
SF1-220ENST00000626028 POTECB2RU33 542 aa28.45■■■□□ 2.14
SF1-220ENST00000626028 GPC2Q8N158 579 aa28.45■■■□□ 2.14
SF1-220ENST00000626028 PLA2G12BQ9BX93 195 aa28.45■■■□□ 2.14
SF1-220ENST00000626028 PPIP5K2O43314 1243 aa28.44■■■□□ 2.14
SF1-220ENST00000626028 CT47B1P0C2W7 299 aaPredicted RBP28.44■■■□□ 2.14
SF1-220ENST00000626028 CTSWP56202 376 aa28.44■■■□□ 2.14
SF1-220ENST00000626028 SMC1BQ8NDV3 1235 aa28.44■■■□□ 2.14
SF1-220ENST00000626028 DUOX1Q9NRD9 1551 aa28.44■■■□□ 2.14
SF1-220ENST00000626028 COL4A5P29400 1685 aa28.44■■■□□ 2.14
SF1-220ENST00000626028 EIF6P56537 245 aaKnown RBP28.43■■■□□ 2.14
SF1-220ENST00000626028 UBE3BQ7Z3V4 1068 aa28.43■■■□□ 2.14
SF1-220ENST00000626028 NIM1KQ8IY84 436 aa28.43■■■□□ 2.14
SF1-220ENST00000626028 ZNF541Q9H0D2 1346 aa28.43■■■□□ 2.14
SF1-220ENST00000626028 SPEF2Q9C093 1822 aa28.42■■■□□ 2.14
SF1-220ENST00000626028 KIAA2012Q0VF49 1180 aa28.42■■■□□ 2.14
SF1-220ENST00000626028 TTLL11Q8NHH1 800 aa28.42■■■□□ 2.14
SF1-220ENST00000626028 COL4A1P02462 1669 aa28.42■■■□□ 2.14
SF1-220ENST00000626028 BEND3Q5T5X7 828 aa28.41■■■□□ 2.14
SF1-220ENST00000626028 CDC5LQ99459 802 aaKnown RBP28.41■■■□□ 2.14
SF1-220ENST00000626028 PTPRCP08575 1304 aa28.41■■■□□ 2.14
SF1-220ENST00000626028 CEP350Q5VT06 3117 aa28.41■■■□□ 2.14
SF1-220ENST00000626028 AOC3Q16853 763 aa28.4■■■□□ 2.14
SF1-220ENST00000626028 ALDH1L2Q3SY69 923 aa28.4■■■□□ 2.14
SF1-220ENST00000626028 SLC51AQ86UW1 340 aa28.4■■■□□ 2.14
SF1-220ENST00000626028 MIER1Q8N108 512 aa28.4■■■□□ 2.14
SF1-220ENST00000626028 PODXL2Q9NZ53 605 aa28.4■■■□□ 2.14
SF1-220ENST00000626028 CASP7P55210 303 aa28.39■■■□□ 2.14
SF1-220ENST00000626028 ANKRD18AQ8IVF6 992 aa28.39■■■□□ 2.14
SF1-220ENST00000626028 JARID2Q92833 1246 aaPredicted RBP28.39■■■□□ 2.14
SF1-220ENST00000626028 SEC31BQ9NQW1 1179 aa28.39■■■□□ 2.14
SF1-220ENST00000626028 ZNRF3Q9ULT6 936 aa28.39■■■□□ 2.14
SF1-220ENST00000626028 NSFL1CQ9UNZ2 370 aaKnown RBP28.39■■■□□ 2.14
SF1-220ENST00000626028 ALDH1L1O75891 902 aa28.38■■■□□ 2.13
SF1-220ENST00000626028 CDCA7LQ96GN5 454 aa28.38■■■□□ 2.13
SF1-220ENST00000626028 F6X3S4 739 aa28.37■■■□□ 2.13
SF1-220ENST00000626028 APLP1P51693 650 aa28.37■■■□□ 2.13
SF1-220ENST00000626028 MRPL50Q8N5N7 158 aaKnown RBP28.37■■■□□ 2.13
SF1-220ENST00000626028 EYA3Q99504 573 aa28.37■■■□□ 2.13
SF1-220ENST00000626028 HACL1Q9UJ83 578 aa28.36■■■□□ 2.13
SF1-220ENST00000626028 CSF1RP07333 972 aa28.35■■■□□ 2.13
SF1-220ENST00000626028 WASHC4Q2M389 1173 aa28.35■■■□□ 2.13
SF1-220ENST00000626028 GPSM2P81274 684 aa28.34■■■□□ 2.13
SF1-220ENST00000626028 PNMA8AQ86V59 439 aaPredicted RBP28.34■■■□□ 2.13
SF1-220ENST00000626028 SSH1Q8WYL5 1049 aa28.34■■■□□ 2.13
SF1-220ENST00000626028 SRCIN1Q9C0H9 1055 aa28.34■■■□□ 2.13
SF1-220ENST00000626028 TAF1DQ9H5J8 278 aaPredicted RBP28.34■■■□□ 2.13
SF1-220ENST00000626028 BSDC1Q9NW68 430 aaPredicted RBP28.34■■■□□ 2.13
SF1-220ENST00000626028 ADAMTSL1Q8N6G6 1762 aa28.34■■■□□ 2.13
SF1-220ENST00000626028 GRM8O00222 908 aa28.33■■■□□ 2.13
SF1-220ENST00000626028 GREM2Q9H772 168 aa28.33■■■□□ 2.13
SF1-220ENST00000626028 PSME4Q14997 1843 aa28.32■■■□□ 2.12
SF1-220ENST00000626028 TBC1D16Q8TBP0 767 aa28.32■■■□□ 2.12
SF1-220ENST00000626028 CCDC85AQ96PX6 553 aaPredicted RBP28.32■■■□□ 2.12
SF1-220ENST00000626028 ANKIB1Q9P2G1 1089 aa28.32■■■□□ 2.12
SF1-220ENST00000626028 POLLQ9UGP5 575 aa28.32■■■□□ 2.12
SF1-220ENST00000626028 C6orf229H3BNL8 230 aa28.31■■■□□ 2.12
SF1-220ENST00000626028 LMOD1P29536 600 aaPredicted RBP28.31■■■□□ 2.12
SF1-220ENST00000626028 TNIP1Q15025 636 aa28.31■■■□□ 2.12
SF1-220ENST00000626028 LDHDQ86WU2 507 aa28.31■■■□□ 2.12
SF1-220ENST00000626028 XDHP47989 1333 aa28.31■■■□□ 2.12
SF1-220ENST00000626028 EPHX2P34913 555 aa28.3■■■□□ 2.12
SF1-220ENST00000626028 BRPF1P55201 1214 aaPredicted RBP28.3■■■□□ 2.12
SF1-220ENST00000626028 CXCL9Q07325 125 aa28.3■■■□□ 2.12
SF1-220ENST00000626028 CHADLQ6NUI6 762 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms