RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 SUPT20HQ8NEM7 779 aa26.4■■□□□ 1.82
SMC6-210ENST00000621152 METTL22Q9BUU2 404 aaPredicted RBP26.4■■□□□ 1.82
SMC6-210ENST00000621152 HACL1Q9UJ83 578 aa26.4■■□□□ 1.82
SMC6-210ENST00000621152 WDR63Q8IWG1 891 aa26.39■■□□□ 1.82
SMC6-210ENST00000621152 NIM1KQ8IY84 436 aa26.39■■□□□ 1.82
SMC6-210ENST00000621152 CCDC191Q8NCU4 936 aa26.39■■□□□ 1.82
SMC6-210ENST00000621152 VPS33BQ9H267 617 aa26.39■■□□□ 1.82
SMC6-210ENST00000621152 MAP3K2Q9Y2U5 619 aa26.39■■□□□ 1.82
SMC6-210ENST00000621152 CEP350Q5VT06 3117 aa26.38■■□□□ 1.81
SMC6-210ENST00000621152 AOC3Q16853 763 aa26.38■■□□□ 1.81
SMC6-210ENST00000621152 TMC4Q7Z404 712 aa26.38■■□□□ 1.81
SMC6-210ENST00000621152 JARID2Q92833 1246 aaPredicted RBP26.38■■□□□ 1.81
SMC6-210ENST00000621152 RTFDC1Q9BY42 306 aaPredicted RBP26.38■■□□□ 1.81
SMC6-210ENST00000621152 SLC4A2P04920 1241 aa26.37■■□□□ 1.81
SMC6-210ENST00000621152 EPHX2P34913 555 aa26.37■■□□□ 1.81
SMC6-210ENST00000621152 EAPPQ56P03 285 aaPredicted RBP26.37■■□□□ 1.81
SMC6-210ENST00000621152 KSR2Q6VAB6 950 aa26.37■■□□□ 1.81
SMC6-210ENST00000621152 CELF1Q92879 486 aaKnown RBP26.37■■□□□ 1.81
SMC6-210ENST00000621152 CWC25Q9NXE8 425 aaPredicted RBP26.37■■□□□ 1.81
SMC6-210ENST00000621152 CLEC11AQ9Y240 323 aa26.37■■□□□ 1.81
SMC6-210ENST00000621152 PI4KAP2A4QPH2 592 aa26.36■■□□□ 1.81
SMC6-210ENST00000621152 HSP90B1P14625 803 aaKnown RBP26.36■■□□□ 1.81
SMC6-210ENST00000621152 LDHDQ86WU2 507 aa26.36■■□□□ 1.81
SMC6-210ENST00000621152 PI4KAP1Q8N8J0 262 aa26.36■■□□□ 1.81
SMC6-210ENST00000621152 KLRG1Q96E93 195 aa26.36■■□□□ 1.81
SMC6-210ENST00000621152 G2E3Q7L622 706 aa26.35■■□□□ 1.81
SMC6-210ENST00000621152 PCCAP05165 728 aaPredicted RBP26.34■■□□□ 1.81
SMC6-210ENST00000621152 COL4A5P29400 1685 aa26.34■■□□□ 1.81
SMC6-210ENST00000621152 LAMB2P55268 1798 aa26.33■■□□□ 1.81
SMC6-210ENST00000621152 RPS8P62241 208 aaKnown RBP26.33■■□□□ 1.81
SMC6-210ENST00000621152 PNMA8AQ86V59 439 aaPredicted RBP26.33■■□□□ 1.81
SMC6-210ENST00000621152 ZNRF3Q9ULT6 936 aa26.33■■□□□ 1.81
SMC6-210ENST00000621152 NSFL1CQ9UNZ2 370 aaKnown RBP26.33■■□□□ 1.81
SMC6-210ENST00000621152 FANCIQ9NVI1 1328 aa26.33■■□□□ 1.81
SMC6-210ENST00000621152 PDE8AO60658 829 aa26.31■■□□□ 1.8
SMC6-210ENST00000621152 VAMP4O75379 141 aa26.31■■□□□ 1.8
SMC6-210ENST00000621152 LMOD1P29536 600 aaPredicted RBP26.31■■□□□ 1.8
SMC6-210ENST00000621152 EXOSC9Q06265 439 aaKnown RBP26.31■■□□□ 1.8
SMC6-210ENST00000621152 CXCL9Q07325 125 aa26.31■■□□□ 1.8
SMC6-210ENST00000621152 KIAA2012Q0VF49 1180 aa26.31■■□□□ 1.8
SMC6-210ENST00000621152 NEXNQ0ZGT2 675 aa26.31■■□□□ 1.8
SMC6-210ENST00000621152 IGKV5-2P06315 115 aa26.3■■□□□ 1.8
SMC6-210ENST00000621152 SEC31BQ9NQW1 1179 aa26.3■■□□□ 1.8
SMC6-210ENST00000621152 SCN4AP35499 1836 aa26.3■■□□□ 1.8
SMC6-210ENST00000621152 DDX60Q8IY21 1712 aaKnown RBP26.29■■□□□ 1.8
SMC6-210ENST00000621152 EPS15P42566 896 aa26.29■■□□□ 1.8
SMC6-210ENST00000621152 CCDC152Q4G0S7 254 aa26.29■■□□□ 1.8
SMC6-210ENST00000621152 CCDC85AQ96PX6 553 aaPredicted RBP26.29■■□□□ 1.8
SMC6-210ENST00000621152 SPINK5Q9NQ38 1064 aaPredicted RBP26.29■■□□□ 1.8
SMC6-210ENST00000621152 TAF1P21675 1872 aa26.29■■□□□ 1.8
SMC6-210ENST00000621152 C6orf229H3BNL8 230 aa26.28■■□□□ 1.8
SMC6-210ENST00000621152 SCNN1DP51172 638 aa26.28■■□□□ 1.8
SMC6-210ENST00000621152 GPSM2P81274 684 aa26.28■■□□□ 1.8
SMC6-210ENST00000621152 ITGBL1O95965 494 aaPredicted RBP26.27■■□□□ 1.8
SMC6-210ENST00000621152 WASHC4Q2M389 1173 aa26.27■■□□□ 1.8
SMC6-210ENST00000621152 CWF19L2Q2TBE0 894 aaKnown RBP26.27■■□□□ 1.8
SMC6-210ENST00000621152 RIMBP2O15034 1052 aa26.26■■□□□ 1.79
SMC6-210ENST00000621152 FLIIQ13045 1269 aa26.26■■□□□ 1.79
SMC6-210ENST00000621152 CIAPIN1Q6FI81 312 aa26.26■■□□□ 1.79
SMC6-210ENST00000621152 CNTROBQ8N137 903 aa26.26■■□□□ 1.79
SMC6-210ENST00000621152 POLLQ9UGP5 575 aa26.26■■□□□ 1.79
SMC6-210ENST00000621152 RAD17O75943 681 aa26.25■■□□□ 1.79
SMC6-210ENST00000621152 MAP1SQ66K74 1059 aaPredicted RBP26.25■■□□□ 1.79
SMC6-210ENST00000621152 JMYQ8N9B5 988 aa26.25■■□□□ 1.79
SMC6-210ENST00000621152 CDHR2Q9BYE9 1310 aa26.24■■□□□ 1.79
SMC6-210ENST00000621152 NEURL1BA8MQ27 555 aa26.24■■□□□ 1.79
SMC6-210ENST00000621152 FKBP5Q13451 457 aaPredicted RBP26.24■■□□□ 1.79
SMC6-210ENST00000621152 TNIP1Q15025 636 aa26.24■■□□□ 1.79
SMC6-210ENST00000621152 MYH16Q9H6N6 1097 aa26.24■■□□□ 1.79
SMC6-210ENST00000621152 CREBZFQ9NS37 354 aa26.24■■□□□ 1.79
SMC6-210ENST00000621152 PASKQ96RG2 1323 aa26.23■■□□□ 1.79
SMC6-210ENST00000621152 YDJCA8MPS7 323 aa26.22■■□□□ 1.79
SMC6-210ENST00000621152 H7C1W4 665 aa26.22■■□□□ 1.79
SMC6-210ENST00000621152 GMPSP49915 693 aaPredicted RBP26.22■■□□□ 1.79
SMC6-210ENST00000621152 USP50Q70EL3 339 aaPredicted RBP26.22■■□□□ 1.79
SMC6-210ENST00000621152 TBC1D16Q8TBP0 767 aa26.22■■□□□ 1.79
SMC6-210ENST00000621152 EYA3Q99504 573 aa26.22■■□□□ 1.79
SMC6-210ENST00000621152 BCL2L13Q9BXK5 485 aa26.22■■□□□ 1.79
SMC6-210ENST00000621152 GPRC5DQ9NZD1 345 aa26.22■■□□□ 1.79
SMC6-210ENST00000621152 ANKRD18AQ8IVF6 992 aa26.21■■□□□ 1.79
SMC6-210ENST00000621152 TTLL11Q8NHH1 800 aa26.21■■□□□ 1.79
SMC6-210ENST00000621152 DNAAF4Q8WXU2 420 aa26.21■■□□□ 1.79
SMC6-210ENST00000621152 DBNDD1Q9H9R9 158 aa26.21■■□□□ 1.79
SMC6-210ENST00000621152 ANKIB1Q9P2G1 1089 aa26.21■■□□□ 1.79
SMC6-210ENST00000621152 CTSWP56202 376 aa26.2■■□□□ 1.78
SMC6-210ENST00000621152 DOK7Q18PE1 504 aa26.2■■□□□ 1.78
SMC6-210ENST00000621152 UBE3BQ7Z3V4 1068 aa26.2■■□□□ 1.78
SMC6-210ENST00000621152 GPR101Q96P66 508 aaPredicted RBP26.2■■□□□ 1.78
SMC6-210ENST00000621152 ZC3H12CQ9C0D7 883 aaKnown RBP26.2■■□□□ 1.78
SMC6-210ENST00000621152 ADARB2Q9NS39 739 aaKnown RBP26.2■■□□□ 1.78
SMC6-210ENST00000621152 COL4A1P02462 1669 aa26.19■■□□□ 1.78
SMC6-210ENST00000621152 GCKRQ14397 625 aa26.19■■□□□ 1.78
SMC6-210ENST00000621152 PODXL2Q9NZ53 605 aa26.19■■□□□ 1.78
SMC6-210ENST00000621152 TMEM88BA6NKF7 163 aa26.18■■□□□ 1.78
SMC6-210ENST00000621152 MKRN1Q9UHC7 482 aaKnown RBP26.18■■□□□ 1.78
SMC6-210ENST00000621152 LINS1Q8NG48 757 aa26.17■■□□□ 1.78
SMC6-210ENST00000621152 CDC5LQ99459 802 aaKnown RBP26.17■■□□□ 1.78
SMC6-210ENST00000621152 GREM2Q9H772 168 aa26.17■■□□□ 1.78
SMC6-210ENST00000621152 GGA1Q9UJY5 639 aa26.17■■□□□ 1.78
SMC6-210ENST00000621152 G3V3G9 751 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms