RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ARFGAP3Q9NP61 516 aa11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 QRICH2Q9H0J4 1663 aa11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 BLOC1S2Q6QNY1 142 aa11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 HYPKQ9NX55 129 aa11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 RRP15Q9Y3B9 282 aaKnown RBP11.41□□□□□ -0.58
TNFAIP3-210ENST00000620204 ADGRB1O14514 1584 aa11.4□□□□□ -0.58
TNFAIP3-210ENST00000620204 SGSM2O43147 1006 aa11.4□□□□□ -0.58
TNFAIP3-210ENST00000620204 LMOD1P29536 600 aaPredicted RBP11.4□□□□□ -0.58
TNFAIP3-210ENST00000620204 PTH1RQ03431 593 aa11.4□□□□□ -0.58
TNFAIP3-210ENST00000620204 STX1AQ16623 288 aa11.4□□□□□ -0.58
TNFAIP3-210ENST00000620204 KIF1BPQ96EK5 621 aa11.4□□□□□ -0.58
TNFAIP3-210ENST00000620204 LRRC2Q9BYS8 371 aa11.4□□□□□ -0.58
TNFAIP3-210ENST00000620204 SH2B1Q9NRF2 756 aaPredicted RBP11.4□□□□□ -0.58
TNFAIP3-210ENST00000620204 AMPHP49418 695 aa11.4□□□□□ -0.58
TNFAIP3-210ENST00000620204 FTOQ9C0B1 505 aaKnown RBP eCLIP11.4□□□□□ -0.58
TNFAIP3-210ENST00000620204 GNG11P61952 73 aa11.4□□□□□ -0.59
TNFAIP3-210ENST00000620204 PSME1Q06323 249 aa11.4□□□□□ -0.59
TNFAIP3-210ENST00000620204 GOLGA8FQ08AF8 430 aa11.4□□□□□ -0.59
TNFAIP3-210ENST00000620204 GOLGA8DPQ0D2H9 430 aa11.4□□□□□ -0.59
TNFAIP3-210ENST00000620204 TTC31Q49AM3 519 aaPredicted RBP11.4□□□□□ -0.59
TNFAIP3-210ENST00000620204 NAT10Q9H0A0 1025 aaKnown RBP11.4□□□□□ -0.59
TNFAIP3-210ENST00000620204 TPCN1Q9ULQ1 816 aa11.4□□□□□ -0.59
TNFAIP3-210ENST00000620204 NRXN1Q9ULB1 1477 aa11.4□□□□□ -0.59
TNFAIP3-210ENST00000620204 UTP14AQ9BVJ6 771 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-210ENST00000620204 OSBPL3Q9H4L5 887 aa11.39□□□□□ -0.59
TNFAIP3-210ENST00000620204 ANO10Q9NW15 660 aa11.39□□□□□ -0.59
TNFAIP3-210ENST00000620204 SERPINC1P01008 464 aa11.39□□□□□ -0.59
TNFAIP3-210ENST00000620204 ABTB2Q8N961 1025 aa11.39□□□□□ -0.59
TNFAIP3-210ENST00000620204 PTCH1Q13635 1447 aa11.39□□□□□ -0.59
TNFAIP3-210ENST00000620204 FOXO3O43524 673 aa11.39□□□□□ -0.59
TNFAIP3-210ENST00000620204 JAK2O60674 1132 aa11.39□□□□□ -0.59
TNFAIP3-210ENST00000620204 FSIP1Q8NA03 581 aa11.39□□□□□ -0.59
TNFAIP3-210ENST00000620204 PPP1R13BQ96KQ4 1090 aa11.39□□□□□ -0.59
TNFAIP3-210ENST00000620204 SBNO2Q9Y2G9 1366 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 IFIT2P09913 472 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 GSDMDP57764 484 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 HSP90B2PQ58FF3 399 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 PPP1R42Q7Z4L9 355 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 BRF1Q92994 677 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 HDAC5Q9UQL6 1122 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 NSD2O96028 1365 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 PRR36Q9H6K5 1346 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 CFAP100Q494V2 611 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 NYAP1Q6ZVC0 841 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 LAMC1P11047 1609 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 TULP4Q9NRJ4 1543 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 SLC20A2Q08357 652 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 ICE2Q659A1 982 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 XPO4Q9C0E2 1151 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 EFCC1Q9HA90 598 aa11.38□□□□□ -0.59
TNFAIP3-210ENST00000620204 SPATA31D1Q6ZQQ2 1576 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 CCZ1BP86790 482 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 CCZ1P86791 482 aaPredicted RBP11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 PGBD1Q96JS3 809 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 RABEP2Q9H5N1 569 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 TBX22Q9Y458 520 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 JRKLQ9Y4A0 524 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 RBM8AQ9Y5S9 174 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 ZFYVE9O95405 1425 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 ATP8B2P98198 1209 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 RHPN1Q8TCX5 695 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 ADAM21Q9UKJ8 722 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 MED14O60244 1454 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 TTC14Q96N46 770 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 ORC3Q9UBD5 711 aaPredicted RBP11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 CFAP45Q9UL16 551 aa11.37□□□□□ -0.59
TNFAIP3-210ENST00000620204 PTPRCP08575 1304 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 A0A1B0GUL7 405 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 VPS53Q5VIR6 699 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 CREBRFQ8IUR6 639 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 CLASRPQ8N2M8 674 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 PUF60Q9UHX1 559 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 PTPRMP28827 1452 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 ZNF853P0CG23 659 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 PSMA5P28066 241 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 ETF1P62495 437 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 FLIIQ13045 1269 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 SLFNL1Q499Z3 407 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 E4F1Q66K89 784 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 STK11IPQ8N1F8 1099 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 MRFAP1L1Q96HT8 127 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 LSG1Q9H089 658 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 A0A1B0GVL5 298 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 H2AFXP16104 143 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 FSD1Q9BTV5 496 aa11.36□□□□□ -0.59
TNFAIP3-210ENST00000620204 CCT2P78371 535 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-210ENST00000620204 KARSQ15046 597 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-210ENST00000620204 MICALL1Q8N3F8 863 aa11.35□□□□□ -0.59
TNFAIP3-210ENST00000620204 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
TNFAIP3-210ENST00000620204 SRRTQ9BXP5 876 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-210ENST00000620204 PIK3R4Q99570 1358 aa11.35□□□□□ -0.59
TNFAIP3-210ENST00000620204 SETBP1Q9Y6X0 1596 aa11.35□□□□□ -0.59
TNFAIP3-210ENST00000620204 MNAT1P51948 309 aa11.35□□□□□ -0.59
TNFAIP3-210ENST00000620204 EP400NLQ6ZTU2 488 aa11.35□□□□□ -0.59
TNFAIP3-210ENST00000620204 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
TNFAIP3-210ENST00000620204 MYOM1P52179 1685 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 RIMS1Q86UR5 1692 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 PLEKHG1Q9ULL1 1385 aa11.34□□□□□ -0.59
TNFAIP3-210ENST00000620204 FAM193AP78312 1265 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms