RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 L3MBTL3Q96JM7 780 aaPredicted RBP28.12■■■□□ 2.09
TRAF4-217ENST00000618771 TAF1DQ9H5J8 278 aaPredicted RBP28.12■■■□□ 2.09
TRAF4-217ENST00000618771 BBOX1O75936 387 aa28.11■■■□□ 2.09
TRAF4-217ENST00000618771 LDHDQ86WU2 507 aa28.11■■■□□ 2.09
TRAF4-217ENST00000618771 GRAPQ13588 217 aa28.1■■■□□ 2.09
TRAF4-217ENST00000618771 GRAPLQ8TC17 118 aaPredicted RBP28.1■■■□□ 2.09
TRAF4-217ENST00000618771 METTL22Q9BUU2 404 aaPredicted RBP28.1■■■□□ 2.09
TRAF4-217ENST00000618771 ZNF541Q9H0D2 1346 aa28.1■■■□□ 2.09
TRAF4-217ENST00000618771 COL4A5P29400 1685 aa28.1■■■□□ 2.09
TRAF4-217ENST00000618771 LRRC37AA6NMS7 1700 aa28.09■■■□□ 2.09
TRAF4-217ENST00000618771 IRS4O14654 1257 aaPredicted RBP28.09■■■□□ 2.09
TRAF4-217ENST00000618771 ZBTB38Q8NAP3 1195 aaPredicted RBP28.09■■■□□ 2.09
TRAF4-217ENST00000618771 CCDC191Q8NCU4 936 aa28.09■■■□□ 2.09
TRAF4-217ENST00000618771 JDP2Q8WYK2 163 aa28.09■■■□□ 2.09
TRAF4-217ENST00000618771 MAP3K2Q9Y2U5 619 aa28.09■■■□□ 2.09
TRAF4-217ENST00000618771 SF3B3Q15393 1217 aaKnown RBP28.08■■■□□ 2.09
TRAF4-217ENST00000618771 EAPPQ56P03 285 aaPredicted RBP28.08■■■□□ 2.09
TRAF4-217ENST00000618771 KSR2Q6VAB6 950 aa28.08■■■□□ 2.09
TRAF4-217ENST00000618771 PASKQ96RG2 1323 aa28.08■■■□□ 2.09
TRAF4-217ENST00000618771 FZD9O00144 591 aa28.07■■■□□ 2.08
TRAF4-217ENST00000618771 SP8Q8IXZ3 490 aa28.07■■■□□ 2.08
TRAF4-217ENST00000618771 CWC25Q9NXE8 425 aaPredicted RBP28.07■■■□□ 2.08
TRAF4-217ENST00000618771 PI4KAP2A4QPH2 592 aa28.06■■■□□ 2.08
TRAF4-217ENST00000618771 SLC4A2P04920 1241 aa28.06■■■□□ 2.08
TRAF4-217ENST00000618771 LARGE2Q8N3Y3 721 aa28.06■■■□□ 2.08
TRAF4-217ENST00000618771 PI4KAP1Q8N8J0 262 aa28.06■■■□□ 2.08
TRAF4-217ENST00000618771 HACL1Q9UJ83 578 aa28.06■■■□□ 2.08
TRAF4-217ENST00000618771 CLEC11AQ9Y240 323 aa28.06■■■□□ 2.08
TRAF4-217ENST00000618771 MYH3P11055 1940 aa28.06■■■□□ 2.08
TRAF4-217ENST00000618771 PCCAP05165 728 aaPredicted RBP28.05■■■□□ 2.08
TRAF4-217ENST00000618771 HSP90B1P14625 803 aaKnown RBP28.05■■■□□ 2.08
TRAF4-217ENST00000618771 CNTNAP1P78357 1384 aa28.05■■■□□ 2.08
TRAF4-217ENST00000618771 EXOSC9Q06265 439 aaKnown RBP28.05■■■□□ 2.08
TRAF4-217ENST00000618771 G2E3Q7L622 706 aa28.05■■■□□ 2.08
TRAF4-217ENST00000618771 TMC4Q7Z404 712 aa28.05■■■□□ 2.08
TRAF4-217ENST00000618771 SUPT20HQ8NEM7 779 aa28.04■■■□□ 2.08
TRAF4-217ENST00000618771 SPINK5Q9NQ38 1064 aaPredicted RBP28.04■■■□□ 2.08
TRAF4-217ENST00000618771 COL4A1P02462 1669 aa28.03■■■□□ 2.08
TRAF4-217ENST00000618771 PPIP5K2O43314 1243 aa28.03■■■□□ 2.08
TRAF4-217ENST00000618771 VAMP4O75379 141 aa28.03■■■□□ 2.08
TRAF4-217ENST00000618771 ITGBL1O95965 494 aaPredicted RBP28.03■■■□□ 2.08
TRAF4-217ENST00000618771 EPHX2P34913 555 aa28.03■■■□□ 2.08
TRAF4-217ENST00000618771 DPP8Q6V1X1 898 aaPredicted RBP28.03■■■□□ 2.08
TRAF4-217ENST00000618771 MPNDQ8N594 471 aa28.03■■■□□ 2.08
TRAF4-217ENST00000618771 MYH16Q9H6N6 1097 aa28.03■■■□□ 2.08
TRAF4-217ENST00000618771 NEXNQ0ZGT2 675 aa28.02■■■□□ 2.08
TRAF4-217ENST00000618771 RTFDC1Q9BY42 306 aaPredicted RBP28.02■■■□□ 2.08
TRAF4-217ENST00000618771 TMEM88BA6NKF7 163 aa28.01■■■□□ 2.07
TRAF4-217ENST00000618771 EIF6P56537 245 aaKnown RBP28.01■■■□□ 2.07
TRAF4-217ENST00000618771 FLIIQ13045 1269 aa28.01■■■□□ 2.07
TRAF4-217ENST00000618771 NIM1KQ8IY84 436 aa28.01■■■□□ 2.07
TRAF4-217ENST00000618771 GPC2Q8N158 579 aa28.01■■■□□ 2.07
TRAF4-217ENST00000618771 CELF1Q92879 486 aaKnown RBP28.01■■■□□ 2.07
TRAF4-217ENST00000618771 VPS33BQ9H267 617 aa28.01■■■□□ 2.07
TRAF4-217ENST00000618771 DUOX1Q9NRD9 1551 aa28■■■□□ 2.07
TRAF4-217ENST00000618771 IGKV5-2P06315 115 aa28■■■□□ 2.07
TRAF4-217ENST00000618771 AOC3Q16853 763 aa28■■■□□ 2.07
TRAF4-217ENST00000618771 JARID2Q92833 1246 aaPredicted RBP28■■■□□ 2.07
TRAF4-217ENST00000618771 FOXN1O15353 648 aa27.99■■■□□ 2.07
TRAF4-217ENST00000618771 CDHR2Q9BYE9 1310 aa27.98■■■□□ 2.07
TRAF4-217ENST00000618771 PDE8AO60658 829 aa27.98■■■□□ 2.07
TRAF4-217ENST00000618771 VEGFBP49765 207 aa27.98■■■□□ 2.07
TRAF4-217ENST00000618771 FKBP5Q13451 457 aaPredicted RBP27.98■■■□□ 2.07
TRAF4-217ENST00000618771 PNMA8AQ86V59 439 aaPredicted RBP27.98■■■□□ 2.07
TRAF4-217ENST00000618771 ZNF521Q96K83 1311 aa27.97■■■□□ 2.07
TRAF4-217ENST00000618771 ADAMTSL1Q8N6G6 1762 aa27.97■■■□□ 2.07
TRAF4-217ENST00000618771 CWF19L2Q2TBE0 894 aaKnown RBP27.97■■■□□ 2.07
TRAF4-217ENST00000618771 GJA3Q9Y6H8 435 aa27.97■■■□□ 2.07
TRAF4-217ENST00000618771 LTBP1Q14766 1721 aa27.97■■■□□ 2.07
TRAF4-217ENST00000618771 NEURL1BA8MQ27 555 aa27.96■■■□□ 2.07
TRAF4-217ENST00000618771 CCDC152Q4G0S7 254 aa27.96■■■□□ 2.07
TRAF4-217ENST00000618771 MAP1SQ66K74 1059 aaPredicted RBP27.96■■■□□ 2.07
TRAF4-217ENST00000618771 CNTROBQ8N137 903 aa27.96■■■□□ 2.07
TRAF4-217ENST00000618771 RPS8P62241 208 aaKnown RBP27.95■■■□□ 2.06
TRAF4-217ENST00000618771 KIAA2012Q0VF49 1180 aa27.95■■■□□ 2.06
TRAF4-217ENST00000618771 SEC31BQ9NQW1 1179 aa27.94■■■□□ 2.06
TRAF4-217ENST00000618771 NSFL1CQ9UNZ2 370 aaKnown RBP27.94■■■□□ 2.06
TRAF4-217ENST00000618771 SPEF2Q9C093 1822 aa27.94■■■□□ 2.06
TRAF4-217ENST00000618771 DNAAF4Q8WXU2 420 aa27.93■■■□□ 2.06
TRAF4-217ENST00000618771 AIDAQ96BJ3 306 aa27.93■■■□□ 2.06
TRAF4-217ENST00000618771 ZNRF3Q9ULT6 936 aa27.93■■■□□ 2.06
TRAF4-217ENST00000618771 CCDC85AQ96PX6 553 aaPredicted RBP27.92■■■□□ 2.06
TRAF4-217ENST00000618771 UBE3BQ7Z3V4 1068 aa27.91■■■□□ 2.06
TRAF4-217ENST00000618771 LMOD1P29536 600 aaPredicted RBP27.9■■■□□ 2.06
TRAF4-217ENST00000618771 CTCFP49711 727 aaPredicted RBP27.9■■■□□ 2.06
TRAF4-217ENST00000618771 CTSWP56202 376 aa27.9■■■□□ 2.06
TRAF4-217ENST00000618771 GPSM2P81274 684 aa27.9■■■□□ 2.06
TRAF4-217ENST00000618771 PRDM10Q9NQV6 1147 aa27.9■■■□□ 2.06
TRAF4-217ENST00000618771 H7C1W4 665 aa27.89■■■□□ 2.06
TRAF4-217ENST00000618771 SCNN1DP51172 638 aa27.89■■■□□ 2.06
TRAF4-217ENST00000618771 CXCL9Q07325 125 aa27.89■■■□□ 2.06
TRAF4-217ENST00000618771 GCKRQ14397 625 aa27.89■■■□□ 2.06
TRAF4-217ENST00000618771 DEFB115Q30KQ5 88 aa27.89■■■□□ 2.06
TRAF4-217ENST00000618771 LINS1Q8NG48 757 aa27.89■■■□□ 2.06
TRAF4-217ENST00000618771 C6orf229H3BNL8 230 aa27.88■■■□□ 2.05
TRAF4-217ENST00000618771 CCER2I3L3R5 266 aa27.88■■■□□ 2.05
TRAF4-217ENST00000618771 WBP1LQ9NX94 342 aa27.88■■■□□ 2.05
TRAF4-217ENST00000618771 RASSF10A6NK89 507 aa27.87■■■□□ 2.05
TRAF4-217ENST00000618771 WASHC4Q2M389 1173 aa27.87■■■□□ 2.05
TRAF4-217ENST00000618771 ANKRD18AQ8IVF6 992 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms