RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 SETDB2Q96T68 719 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 KLHL40Q2TBA0 621 aa20.35■□□□□ 0.85
ATXN2-227ENST00000616825 ZGPATQ8N5A5 531 aaKnown RBP20.35■□□□□ 0.85
ATXN2-227ENST00000616825 CNNM2Q9H8M5 875 aa20.35■□□□□ 0.85
ATXN2-227ENST00000616825 N4BP3O15049 544 aa20.35■□□□□ 0.85
ATXN2-227ENST00000616825 CTNNA2P26232 953 aa20.35■□□□□ 0.85
ATXN2-227ENST00000616825 SMARCC1Q92922 1105 aaPredicted RBP20.35■□□□□ 0.85
ATXN2-227ENST00000616825 C16orf45Q96MC5 204 aaPredicted RBP20.35■□□□□ 0.85
ATXN2-227ENST00000616825 TMCO5BA8MYB1 307 aa20.35■□□□□ 0.85
ATXN2-227ENST00000616825 ALS2CR12Q96Q35 445 aa20.35■□□□□ 0.85
ATXN2-227ENST00000616825 ST5P78524 1137 aa20.34■□□□□ 0.85
ATXN2-227ENST00000616825 PCF11O94913 1555 aaKnown RBP20.34■□□□□ 0.85
ATXN2-227ENST00000616825 SYKP43405 635 aa20.34■□□□□ 0.85
ATXN2-227ENST00000616825 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
ATXN2-227ENST00000616825 MAP3K1Q13233 1512 aa20.34■□□□□ 0.85
ATXN2-227ENST00000616825 ATP8B2P98198 1209 aa20.34■□□□□ 0.85
ATXN2-227ENST00000616825 AKAP4Q5JQC9 854 aa20.34■□□□□ 0.85
ATXN2-227ENST00000616825 RBM8AQ9Y5S9 174 aaKnown RBP20.34■□□□□ 0.85
ATXN2-227ENST00000616825 MSH6P52701 1360 aa20.34■□□□□ 0.85
ATXN2-227ENST00000616825 MYCNP04198 464 aaPredicted RBP20.34■□□□□ 0.85
ATXN2-227ENST00000616825 MAP2K1Q02750 393 aaPredicted RBP20.34■□□□□ 0.85
ATXN2-227ENST00000616825 PPP4R3BQ5MIZ7 849 aa20.34■□□□□ 0.85
ATXN2-227ENST00000616825 NECAB1Q8N987 351 aa20.34■□□□□ 0.85
ATXN2-227ENST00000616825 CCDC97Q96F63 343 aaPredicted RBP20.34■□□□□ 0.85
ATXN2-227ENST00000616825 PCDHB15Q9Y5E8 787 aa20.34■□□□□ 0.85
ATXN2-227ENST00000616825 AKR1B10O60218 316 aa20.33■□□□□ 0.85
ATXN2-227ENST00000616825 NOP2P46087 812 aaKnown RBP20.33■□□□□ 0.85
ATXN2-227ENST00000616825 HLTFQ14527 1009 aaKnown RBP eCLIP20.33■□□□□ 0.85
ATXN2-227ENST00000616825 TCEANC2Q96MN5 208 aa20.33■□□□□ 0.85
ATXN2-227ENST00000616825 IQSEC3Q9UPP2 1182 aaPredicted RBP20.33■□□□□ 0.85
ATXN2-227ENST00000616825 ERMNQ8TAM6 284 aa20.33■□□□□ 0.85
ATXN2-227ENST00000616825 SHTN1A0MZ66 631 aa20.33■□□□□ 0.84
ATXN2-227ENST00000616825 RRP9O43818 475 aaKnown RBP20.33■□□□□ 0.84
ATXN2-227ENST00000616825 ADCY5O95622 1261 aa20.33■□□□□ 0.84
ATXN2-227ENST00000616825 MCMDC2Q4G0Z9 681 aa20.33■□□□□ 0.84
ATXN2-227ENST00000616825 SLC9C2Q5TAH2 1124 aa20.33■□□□□ 0.84
ATXN2-227ENST00000616825 ALG1Q9BT22 464 aa20.33■□□□□ 0.84
ATXN2-227ENST00000616825 PRC1O43663 620 aa20.32■□□□□ 0.84
ATXN2-227ENST00000616825 TBCAO75347 108 aaKnown RBP20.32■□□□□ 0.84
ATXN2-227ENST00000616825 ZSCAN22P10073 491 aaPredicted RBP20.32■□□□□ 0.84
ATXN2-227ENST00000616825 TRIM47Q96LD4 638 aa20.32■□□□□ 0.84
ATXN2-227ENST00000616825 ISM2Q6H9L7 571 aa20.32■□□□□ 0.84
ATXN2-227ENST00000616825 NAA16Q6N069 864 aaPredicted RBP20.32■□□□□ 0.84
ATXN2-227ENST00000616825 KCNG4Q8TDN1 519 aa20.32■□□□□ 0.84
ATXN2-227ENST00000616825 PAXIP1Q6ZW49 1069 aaPredicted RBP20.32■□□□□ 0.84
ATXN2-227ENST00000616825 TSPY3P0CV98 308 aa20.32■□□□□ 0.84
ATXN2-227ENST00000616825 TSPY8P0CW00 308 aa20.32■□□□□ 0.84
ATXN2-227ENST00000616825 RTN1Q16799 776 aa20.32■□□□□ 0.84
ATXN2-227ENST00000616825 OGFOD1Q8N543 542 aa20.32■□□□□ 0.84
ATXN2-227ENST00000616825 C8orf58Q8NAV2 365 aa20.32■□□□□ 0.84
ATXN2-227ENST00000616825 KAT6BQ8WYB5 2073 aa20.32■□□□□ 0.84
ATXN2-227ENST00000616825 SLC4A8Q2Y0W8 1093 aa20.31■□□□□ 0.84
ATXN2-227ENST00000616825 UVSSAQ2YD98 709 aa20.31■□□□□ 0.84
ATXN2-227ENST00000616825 CCDC174Q6PII3 467 aa20.31■□□□□ 0.84
ATXN2-227ENST00000616825 RMND1Q9NWS8 449 aa20.31■□□□□ 0.84
ATXN2-227ENST00000616825 SLC4A4Q9Y6R1 1079 aa20.31■□□□□ 0.84
ATXN2-227ENST00000616825 IFIT1BQ5T764 474 aaKnown RBP20.31■□□□□ 0.84
ATXN2-227ENST00000616825 ESYT1Q9BSJ8 1104 aa20.31■□□□□ 0.84
ATXN2-227ENST00000616825 LRRC2Q9BYS8 371 aa20.31■□□□□ 0.84
ATXN2-227ENST00000616825 HCLS1P14317 486 aaPredicted RBP20.31■□□□□ 0.84
ATXN2-227ENST00000616825 SPAG5Q96R06 1193 aa20.31■□□□□ 0.84
ATXN2-227ENST00000616825 ATP6V1AP38606 617 aa20.3■□□□□ 0.84
ATXN2-227ENST00000616825 TOM1O60784 492 aa20.3■□□□□ 0.84
ATXN2-227ENST00000616825 SPAG1Q07617 926 aa20.3■□□□□ 0.84
ATXN2-227ENST00000616825 INCENPQ9NQS7 918 aa20.3■□□□□ 0.84
ATXN2-227ENST00000616825 NIP7Q9Y221 180 aaKnown RBP eCLIP20.3■□□□□ 0.84
ATXN2-227ENST00000616825 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
ATXN2-227ENST00000616825 PRPF4BQ13523 1007 aaKnown RBP20.29■□□□□ 0.84
ATXN2-227ENST00000616825 DDB1Q16531 1140 aa20.29■□□□□ 0.84
ATXN2-227ENST00000616825 GOPCQ9HD26 462 aa20.29■□□□□ 0.84
ATXN2-227ENST00000616825 EXOC1Q9NV70 894 aa20.29■□□□□ 0.84
ATXN2-227ENST00000616825 EIF4A2Q14240 407 aaKnown RBP20.29■□□□□ 0.84
ATXN2-227ENST00000616825 SMC1AQ14683 1233 aaKnown RBP20.29■□□□□ 0.84
ATXN2-227ENST00000616825 GCOM1H8Y6P7 765 aaPredicted RBP20.29■□□□□ 0.84
ATXN2-227ENST00000616825 MYZAPP0CAP1 466 aa20.29■□□□□ 0.84
ATXN2-227ENST00000616825 ERICH4A6NGS2 130 aa20.28■□□□□ 0.84
ATXN2-227ENST00000616825 POLKQ9UBT6 870 aa20.28■□□□□ 0.84
ATXN2-227ENST00000616825 CCDC172P0C7W6 258 aa20.28■□□□□ 0.84
ATXN2-227ENST00000616825 MPHOSPH6Q99547 160 aaKnown RBP20.28■□□□□ 0.84
ATXN2-227ENST00000616825 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
ATXN2-227ENST00000616825 GIMAP6Q6P9H5 292 aa20.28■□□□□ 0.84
ATXN2-227ENST00000616825 TMEM87AQ8NBN3 555 aa20.28■□□□□ 0.84
ATXN2-227ENST00000616825 POTEB2H3BUK9 544 aa20.27■□□□□ 0.84
ATXN2-227ENST00000616825 GNG11P61952 73 aa20.27■□□□□ 0.84
ATXN2-227ENST00000616825 SNW1Q13573 536 aaKnown RBP20.27■□□□□ 0.84
ATXN2-227ENST00000616825 FERMT2Q96AC1 680 aa20.27■□□□□ 0.84
ATXN2-227ENST00000616825 ZC3H12CQ9C0D7 883 aaKnown RBP20.27■□□□□ 0.84
ATXN2-227ENST00000616825 RBM27Q9P2N5 1060 aaKnown RBP20.27■□□□□ 0.84
ATXN2-227ENST00000616825 UHRF1BP1LA0JNW5 1464 aa20.27■□□□□ 0.84
ATXN2-227ENST00000616825 TPTE2Q6XPS3 522 aa20.27■□□□□ 0.84
ATXN2-227ENST00000616825 USP37Q86T82 979 aa20.27■□□□□ 0.84
ATXN2-227ENST00000616825 MRPS27Q92552 414 aaKnown RBP20.27■□□□□ 0.84
ATXN2-227ENST00000616825 HDAC9Q9UKV0 1011 aa20.27■□□□□ 0.84
ATXN2-227ENST00000616825 KDM5BQ9UGL1 1544 aa20.27■□□□□ 0.83
ATXN2-227ENST00000616825 MRPL50Q8N5N7 158 aaKnown RBP20.27■□□□□ 0.83
ATXN2-227ENST00000616825 ACTN2P35609 894 aa20.26■□□□□ 0.83
ATXN2-227ENST00000616825 ACSBG1Q96GR2 724 aa20.26■□□□□ 0.83
ATXN2-227ENST00000616825 EHBP1Q8NDI1 1231 aa20.26■□□□□ 0.83
ATXN2-227ENST00000616825 PUF60Q9UHX1 559 aaKnown RBP20.26■□□□□ 0.83
ATXN2-227ENST00000616825 GOLGA6L10A0A0M3HER8 536 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms