RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 PI4KAP1Q8N8J0 262 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 ZSWIM6Q9HCJ5 1215 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 TAF6LQ9Y6J9 622 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 NDUFB9Q9Y6M9 179 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 ABCA9Q8IUA7 1624 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 A0A1B0GVL5 298 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 TRIM66O15016 1216 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 OAS2P29728 719 aaKnown RBP7.79□□□□□ -1.16
LMO3-235ENST00000616247 IRX3P78415 501 aaPredicted RBP7.79□□□□□ -1.16
LMO3-235ENST00000616247 TEFQ10587 303 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 ST3GAL1Q11201 340 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 EDC3Q96F86 508 aaKnown RBP7.79□□□□□ -1.16
LMO3-235ENST00000616247 XPO4Q9C0E2 1151 aaKnown RBP7.79□□□□□ -1.16
LMO3-235ENST00000616247 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.79□□□□□ -1.16
LMO3-235ENST00000616247 TSPOAP1O95153 1857 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 SSH2Q76I76 1423 aa7.79□□□□□ -1.16
LMO3-235ENST00000616247 ANKRD65E5RJM6 399 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 KIF2AO00139 706 aaPredicted RBP7.78□□□□□ -1.16
LMO3-235ENST00000616247 SLC27A2O14975 620 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 EVCP57679 992 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 G3BP1Q13283 466 aaKnown RBP eCLIP7.78□□□□□ -1.16
LMO3-235ENST00000616247 MCM6Q14566 821 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 CFAP100Q494V2 611 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 HSP90AB4PQ58FF6 505 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 CHMP4CQ96CF2 233 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 CCDC61Q9Y6R9 512 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 SALL3Q9BXA9 1300 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 POLR3DP05423 398 aaPredicted RBP7.78□□□□□ -1.16
LMO3-235ENST00000616247 ANKRD1Q15327 319 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 ZSCAN26Q16670 478 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 RAB11FIP4Q86YS3 637 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 UTP14AQ9BVJ6 771 aaKnown RBP7.78□□□□□ -1.16
LMO3-235ENST00000616247 RASSF4Q9H2L5 321 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 PHACTR2O75167 634 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 CYP2C19P33261 490 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 GSDMDP57764 484 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 GNG11P61952 73 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 CCZ1BP86790 482 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 CCZ1P86791 482 aaPredicted RBP7.78□□□□□ -1.16
LMO3-235ENST00000616247 STK38Q15208 465 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 SMARCE1Q969G3 411 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 PPP1R13BQ96KQ4 1090 aa7.78□□□□□ -1.16
LMO3-235ENST00000616247 FEZ2Q9UHY8 353 aaPredicted RBP7.78□□□□□ -1.16
LMO3-235ENST00000616247 WASLO00401 505 aaPredicted RBP7.77□□□□□ -1.17
LMO3-235ENST00000616247 Q6ZUG5 572 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 CHST3Q7LGC8 479 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 TXLNBQ8N3L3 684 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 USHBP1Q8N6Y0 703 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 SSH3Q8TE77 659 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 MRFAP1L1Q96HT8 127 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 AK7Q96M32 723 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 PLA2G4AP47712 749 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 SMC1AQ14683 1233 aaKnown RBP7.77□□□□□ -1.17
LMO3-235ENST00000616247 IQCB1Q15051 598 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 OTUD7BQ6GQQ9 843 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 NYAP1Q6ZVC0 841 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 NCOA5Q9HCD5 579 aaKnown RBP7.77□□□□□ -1.17
LMO3-235ENST00000616247 CWC15Q9P013 229 aaKnown RBP7.77□□□□□ -1.17
LMO3-235ENST00000616247 ABCC1P33527 1531 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 ATP7AQ04656 1500 aa7.77□□□□□ -1.17
LMO3-235ENST00000616247 A0A0D9SFI3 127 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 E4F1Q66K89 784 aaPredicted RBP7.76□□□□□ -1.17
LMO3-235ENST00000616247 LEKR1Q6ZMV7 388 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 CCDC129Q6ZRS4 1044 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 GPATCH11Q8N954 259 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 EVI5LQ96CN4 794 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 USP28Q96RU2 1077 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 TSPYL1Q9H0U9 437 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 FHOD1Q9Y613 1164 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 KIF1BO60333 1816 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 ELP1O95163 1332 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 MAP3K19Q56UN5 1328 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 RPS6KB1P23443 525 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 CREBRFQ8IUR6 639 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 KLHDC4Q8TBB5 520 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 ARFGAP3Q9NP61 516 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 SLC52A1Q9NWF4 448 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.76□□□□□ -1.17
LMO3-235ENST00000616247 TET3O43151 1660 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 KIAA0232Q92628 1395 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 CTAGE5O15320 804 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 CAVIN2O95810 425 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 GTF2A1P52655 376 aaPredicted RBP7.76□□□□□ -1.17
LMO3-235ENST00000616247 KARSQ15046 597 aaKnown RBP7.76□□□□□ -1.17
LMO3-235ENST00000616247 DPCR1Q3MIW9 517 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 GOLGA6L1Q8N7Z2 621 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 NGDNQ8NEJ9 315 aaKnown RBP7.76□□□□□ -1.17
LMO3-235ENST00000616247 SEC62Q99442 399 aaKnown RBP7.76□□□□□ -1.17
LMO3-235ENST00000616247 GOLPH3LQ9H4A5 285 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 VPS18Q9P253 973 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 CHPF2Q9P2E5 772 aa7.76□□□□□ -1.17
LMO3-235ENST00000616247 ETF1P62495 437 aaKnown RBP7.75□□□□□ -1.17
LMO3-235ENST00000616247 NECTIN1Q15223 517 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 DNAAF4Q8WXU2 420 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 CCDC102AQ96A19 550 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 AKT1S1Q96B36 256 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 ZNF396Q96N95 335 aaPredicted RBP7.75□□□□□ -1.17
LMO3-235ENST00000616247 NEK1Q96PY6 1258 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 DIP2BQ9P265 1576 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 REREQ9P2R6 1566 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms