RNA–Protein interactions for RNA: ENST00000613231.1

NKILA-201, NF-kappaB interacting lncRNA, humanhuman

TSL 4 BASIC

Gene NKILA, Length 537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKILA-201ENST00000613231 SUPT16HQ9Y5B9 1047 aaKnown RBP28.31■■■□□ 2.12
NKILA-201ENST00000613231 ARFGEF1Q9Y6D6 1849 aa28.31■■■□□ 2.12
NKILA-201ENST00000613231 CTSWP56202 376 aa28.3■■■□□ 2.12
NKILA-201ENST00000613231 PELP1Q8IZL8 1130 aaKnown RBP28.3■■■□□ 2.12
NKILA-201ENST00000613231 PIM2Q9P1W9 311 aa28.3■■■□□ 2.12
NKILA-201ENST00000613231 COL4A1P02462 1669 aa28.29■■■□□ 2.12
NKILA-201ENST00000613231 UBTFL1P0CB47 393 aaPredicted RBP28.29■■■□□ 2.12
NKILA-201ENST00000613231 FOXO4P98177 505 aa28.29■■■□□ 2.12
NKILA-201ENST00000613231 SF3B3Q15393 1217 aaKnown RBP28.29■■■□□ 2.12
NKILA-201ENST00000613231 STYK1Q6J9G0 422 aa28.29■■■□□ 2.12
NKILA-201ENST00000613231 PLA2G12BQ9BX93 195 aa28.29■■■□□ 2.12
NKILA-201ENST00000613231 PDE3AQ14432 1141 aa28.28■■■□□ 2.12
NKILA-201ENST00000613231 RBM17Q96I25 401 aaKnown RBP28.28■■■□□ 2.12
NKILA-201ENST00000613231 KAZALD1Q96I82 304 aa28.28■■■□□ 2.12
NKILA-201ENST00000613231 TTLL11Q8NHH1 800 aa28.27■■■□□ 2.12
NKILA-201ENST00000613231 MVPQ14764 893 aaKnown RBP28.26■■■□□ 2.11
NKILA-201ENST00000613231 CCDC152Q4G0S7 254 aa28.26■■■□□ 2.11
NKILA-201ENST00000613231 DDX46Q7L014 1031 aaKnown RBP28.26■■■□□ 2.11
NKILA-201ENST00000613231 TTLL6Q8N841 843 aa28.26■■■□□ 2.11
NKILA-201ENST00000613231 BICC1Q9H694 974 aaKnown RBP28.26■■■□□ 2.11
NKILA-201ENST00000613231 SEC31BQ9NQW1 1179 aa28.26■■■□□ 2.11
NKILA-201ENST00000613231 ZNF219Q9P2Y4 722 aaPredicted RBP28.26■■■□□ 2.11
NKILA-201ENST00000613231 BCS1LQ9Y276 419 aa28.26■■■□□ 2.11
NKILA-201ENST00000613231 CHMP3Q9Y3E7 222 aa28.26■■■□□ 2.11
NKILA-201ENST00000613231 GNAI3P08754 354 aa28.25■■■□□ 2.11
NKILA-201ENST00000613231 HOXA10P31260 410 aaPredicted RBP28.25■■■□□ 2.11
NKILA-201ENST00000613231 DALRD3Q5D0E6 543 aaKnown RBP28.25■■■□□ 2.11
NKILA-201ENST00000613231 LMBR1LQ6UX01 489 aa28.25■■■□□ 2.11
NKILA-201ENST00000613231 CNKSR1Q969H4 720 aa28.25■■■□□ 2.11
NKILA-201ENST00000613231 GREM2Q9H772 168 aa28.25■■■□□ 2.11
NKILA-201ENST00000613231 LRRFIP2Q9Y608 721 aaKnown RBP28.25■■■□□ 2.11
NKILA-201ENST00000613231 ZBTB7BO15156 539 aaPredicted RBP28.23■■■□□ 2.11
NKILA-201ENST00000613231 CSF1RP07333 972 aa28.23■■■□□ 2.11
NKILA-201ENST00000613231 ALDH1B1P30837 517 aa28.23■■■□□ 2.11
NKILA-201ENST00000613231 FAM161AQ3B820 660 aa28.23■■■□□ 2.11
NKILA-201ENST00000613231 PRPF40BQ6NWY9 871 aaKnown RBP28.23■■■□□ 2.11
NKILA-201ENST00000613231 CRAMP1Q96RY5 1269 aa28.23■■■□□ 2.11
NKILA-201ENST00000613231 ANKRD44Q8N8A2 993 aa28.22■■■□□ 2.11
NKILA-201ENST00000613231 YBX3P16989 372 aaKnown RBP eCLIP28.21■■■□□ 2.11
NKILA-201ENST00000613231 CELF1Q92879 486 aaKnown RBP28.21■■■□□ 2.11
NKILA-201ENST00000613231 C1orf115Q9H7X2 142 aa28.21■■■□□ 2.11
NKILA-201ENST00000613231 GRAPQ13588 217 aa28.2■■■□□ 2.1
NKILA-201ENST00000613231 GPR162Q16538 588 aa28.2■■■□□ 2.1
NKILA-201ENST00000613231 SLC51AQ86UW1 340 aa28.2■■■□□ 2.1
NKILA-201ENST00000613231 GRAPLQ8TC17 118 aaPredicted RBP28.2■■■□□ 2.1
NKILA-201ENST00000613231 DDX19BQ9UMR2 479 aa28.2■■■□□ 2.1
NKILA-201ENST00000613231 GNAI2P04899 355 aa28.19■■■□□ 2.1
NKILA-201ENST00000613231 ITGA6P23229 1130 aa28.19■■■□□ 2.1
NKILA-201ENST00000613231 CCDC88AQ3V6T2 1871 aa28.19■■■□□ 2.1
NKILA-201ENST00000613231 PPEF1O14829 653 aaPredicted RBP28.18■■■□□ 2.1
NKILA-201ENST00000613231 C21orf2O43822 256 aa28.18■■■□□ 2.1
NKILA-201ENST00000613231 OLFM4Q6UX06 510 aa28.18■■■□□ 2.1
NKILA-201ENST00000613231 GOLGB1Q14789 3259 aaKnown RBP28.17■■■□□ 2.1
NKILA-201ENST00000613231 RTL9Q8NET4 1388 aa28.17■■■□□ 2.1
NKILA-201ENST00000613231 RABL6Q3YEC7 729 aaPredicted RBP28.17■■■□□ 2.1
NKILA-201ENST00000613231 CRBNQ96SW2 442 aa28.17■■■□□ 2.1
NKILA-201ENST00000613231 HDAC5Q9UQL6 1122 aa28.17■■■□□ 2.1
NKILA-201ENST00000613231 FER1L6Q2WGJ9 1857 aa28.17■■■□□ 2.1
NKILA-201ENST00000613231 ANKRD18BA2A2Z9 1011 aa28.16■■■□□ 2.1
NKILA-201ENST00000613231 CENPBP07199 599 aaPredicted RBP28.16■■■□□ 2.1
NKILA-201ENST00000613231 LRRC37AA6NMS7 1700 aa28.15■■■□□ 2.1
NKILA-201ENST00000613231 RPS8P62241 208 aaKnown RBP28.15■■■□□ 2.1
NKILA-201ENST00000613231 IFIT5Q13325 482 aaKnown RBP28.15■■■□□ 2.1
NKILA-201ENST00000613231 ZNF594Q96JF6 807 aaPredicted RBP28.15■■■□□ 2.1
NKILA-201ENST00000613231 IRX6P78412 446 aaPredicted RBP28.14■■■□□ 2.1
NKILA-201ENST00000613231 CCDC57Q2TAC2 916 aa28.14■■■□□ 2.1
NKILA-201ENST00000613231 ANKRD18AQ8IVF6 992 aa28.14■■■□□ 2.1
NKILA-201ENST00000613231 CDC5LQ99459 802 aaKnown RBP28.14■■■□□ 2.1
NKILA-201ENST00000613231 A0A1B0GUL6 1792 aa28.14■■■□□ 2.09
NKILA-201ENST00000613231 BBOX1O75936 387 aa28.13■■■□□ 2.09
NKILA-201ENST00000613231 TAF7LQ5H9L4 462 aa28.12■■■□□ 2.09
NKILA-201ENST00000613231 C7orf43Q8WVR3 580 aa28.12■■■□□ 2.09
NKILA-201ENST00000613231 KLHDC4Q8TBB5 520 aa28.11■■■□□ 2.09
NKILA-201ENST00000613231 ZBTB40Q9NUA8 1239 aa28.11■■■□□ 2.09
NKILA-201ENST00000613231 SBF1O95248 1867 aa28.1■■■□□ 2.09
NKILA-201ENST00000613231 IGHMBP2P38935 993 aaKnown RBP28.1■■■□□ 2.09
NKILA-201ENST00000613231 ATP6V0A2Q9Y487 856 aa28.1■■■□□ 2.09
NKILA-201ENST00000613231 DCAF8L1A6NGE4 600 aa28.09■■■□□ 2.09
NKILA-201ENST00000613231 ARHGAP27Q6ZUM4 889 aa28.09■■■□□ 2.09
NKILA-201ENST00000613231 CHMP4BQ9H444 224 aaKnown RBP28.09■■■□□ 2.09
NKILA-201ENST00000613231 SRGAP3O43295 1099 aa28.08■■■□□ 2.09
NKILA-201ENST00000613231 SP8Q8IXZ3 490 aa28.08■■■□□ 2.09
NKILA-201ENST00000613231 MPHOSPH8Q99549 860 aa28.08■■■□□ 2.09
NKILA-201ENST00000613231 PNMA6EA0A0J9YXQ4 647 aa28.07■■■□□ 2.08
NKILA-201ENST00000613231 RFX5P48382 616 aaPredicted RBP28.07■■■□□ 2.08
NKILA-201ENST00000613231 CCDC93Q567U6 631 aa28.07■■■□□ 2.08
NKILA-201ENST00000613231 TMX4Q9H1E5 349 aaPredicted RBP28.07■■■□□ 2.08
NKILA-201ENST00000613231 TMC4Q7Z404 712 aa28.06■■■□□ 2.08
NKILA-201ENST00000613231 PUS3Q9BZE2 481 aaKnown RBP28.06■■■□□ 2.08
NKILA-201ENST00000613231 ATP8B2P98198 1209 aa28.05■■■□□ 2.08
NKILA-201ENST00000613231 MTX1Q13505 466 aa28.05■■■□□ 2.08
NKILA-201ENST00000613231 CEP85Q6P2H3 762 aa28.05■■■□□ 2.08
NKILA-201ENST00000613231 EXOC6Q8TAG9 804 aa28.05■■■□□ 2.08
NKILA-201ENST00000613231 BSDC1Q9NW68 430 aaPredicted RBP28.05■■■□□ 2.08
NKILA-201ENST00000613231 PA2G4Q9UQ80 394 aaKnown RBP28.05■■■□□ 2.08
NKILA-201ENST00000613231 LTBP1Q14766 1721 aa28.04■■■□□ 2.08
NKILA-201ENST00000613231 GRIN3BO60391 1043 aa28.04■■■□□ 2.08
NKILA-201ENST00000613231 RASSF7Q02833 373 aa28.04■■■□□ 2.08
NKILA-201ENST00000613231 SOGA3Q5TF21 947 aa28.04■■■□□ 2.08
NKILA-201ENST00000613231 LDHAL6AQ6ZMR3 332 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms