RNA–Protein interactions for RNA: ENST00000609795.5

HNF4A-208, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-208ENST00000609795 TTLL6Q8N841 843 aa22.56■■□□□ 1.2
HNF4A-208ENST00000609795 CRAMP1Q96RY5 1269 aa22.56■■□□□ 1.2
HNF4A-208ENST00000609795 UBTFL1P0CB47 393 aaPredicted RBP22.55■■□□□ 1.2
HNF4A-208ENST00000609795 CCDC152Q4G0S7 254 aa22.55■■□□□ 1.2
HNF4A-208ENST00000609795 DALRD3Q5D0E6 543 aaKnown RBP22.55■■□□□ 1.2
HNF4A-208ENST00000609795 DDX46Q7L014 1031 aaKnown RBP22.55■■□□□ 1.2
HNF4A-208ENST00000609795 TTLL11Q8NHH1 800 aa22.55■■□□□ 1.2
HNF4A-208ENST00000609795 SUCLG2Q96I99 432 aa22.55■■□□□ 1.2
HNF4A-208ENST00000609795 MEIS3Q99687 375 aa22.55■■□□□ 1.2
HNF4A-208ENST00000609795 WWC3Q9ULE0 1092 aa22.55■■□□□ 1.2
HNF4A-208ENST00000609795 CACNA1SQ13698 1873 aa22.55■■□□□ 1.2
HNF4A-208ENST00000609795 CSF1RP07333 972 aa22.54■■□□□ 1.2
HNF4A-208ENST00000609795 GNAI3P08754 354 aa22.54■■□□□ 1.2
HNF4A-208ENST00000609795 KAZALD1Q96I82 304 aa22.54■■□□□ 1.2
HNF4A-208ENST00000609795 HDAC5Q9UQL6 1122 aa22.54■■□□□ 1.2
HNF4A-208ENST00000609795 EPHA10Q5JZY3 1008 aa22.53■■□□□ 1.2
HNF4A-208ENST00000609795 C20orf194Q5TEA3 1177 aa22.53■■□□□ 1.2
HNF4A-208ENST00000609795 CCDC85AQ96PX6 553 aaPredicted RBP22.53■■□□□ 1.2
HNF4A-208ENST00000609795 BCS1LQ9Y276 419 aa22.53■■□□□ 1.2
HNF4A-208ENST00000609795 TAF1P21675 1872 aa22.52■■□□□ 1.2
HNF4A-208ENST00000609795 ZBTB7BO15156 539 aaPredicted RBP22.52■■□□□ 1.2
HNF4A-208ENST00000609795 MVPQ14764 893 aaKnown RBP22.52■■□□□ 1.2
HNF4A-208ENST00000609795 PELP1Q8IZL8 1130 aaKnown RBP22.52■■□□□ 1.2
HNF4A-208ENST00000609795 COG6Q9Y2V7 657 aa22.52■■□□□ 1.2
HNF4A-208ENST00000609795 SUPT16HQ9Y5B9 1047 aaKnown RBP22.52■■□□□ 1.2
HNF4A-208ENST00000609795 SLX4Q8IY92 1834 aa22.52■■□□□ 1.2
HNF4A-208ENST00000609795 PRPF40BQ6NWY9 871 aaKnown RBP22.51■■□□□ 1.19
HNF4A-208ENST00000609795 LMBR1LQ6UX01 489 aa22.51■■□□□ 1.19
HNF4A-208ENST00000609795 GREM2Q9H772 168 aa22.51■■□□□ 1.19
HNF4A-208ENST00000609795 GRAPQ13588 217 aa22.5■■□□□ 1.19
HNF4A-208ENST00000609795 GPR162Q16538 588 aa22.5■■□□□ 1.19
HNF4A-208ENST00000609795 GRAPLQ8TC17 118 aaPredicted RBP22.5■■□□□ 1.19
HNF4A-208ENST00000609795 BICC1Q9H694 974 aaKnown RBP22.5■■□□□ 1.19
HNF4A-208ENST00000609795 SEC31BQ9NQW1 1179 aa22.5■■□□□ 1.19
HNF4A-208ENST00000609795 ARFGEF1Q9Y6D6 1849 aa22.5■■□□□ 1.19
HNF4A-208ENST00000609795 RTL9Q8NET4 1388 aa22.5■■□□□ 1.19
HNF4A-208ENST00000609795 BBOX1O75936 387 aa22.49■■□□□ 1.19
HNF4A-208ENST00000609795 RABL6Q3YEC7 729 aaPredicted RBP22.49■■□□□ 1.19
HNF4A-208ENST00000609795 DDX19BQ9UMR2 479 aa22.49■■□□□ 1.19
HNF4A-208ENST00000609795 LRRFIP2Q9Y608 721 aaKnown RBP22.49■■□□□ 1.19
HNF4A-208ENST00000609795 DCAF8L1A6NGE4 600 aa22.48■■□□□ 1.19
HNF4A-208ENST00000609795 GNAI2P04899 355 aa22.48■■□□□ 1.19
HNF4A-208ENST00000609795 YBX3P16989 372 aaKnown RBP eCLIP22.48■■□□□ 1.19
HNF4A-208ENST00000609795 ANKRD44Q8N8A2 993 aa22.48■■□□□ 1.19
HNF4A-208ENST00000609795 CELF1Q92879 486 aaKnown RBP22.48■■□□□ 1.19
HNF4A-208ENST00000609795 CHMP3Q9Y3E7 222 aa22.48■■□□□ 1.19
HNF4A-208ENST00000609795 ITGA6P23229 1130 aa22.47■■□□□ 1.19
HNF4A-208ENST00000609795 RPS8P62241 208 aaKnown RBP22.47■■□□□ 1.19
HNF4A-208ENST00000609795 FAM161AQ3B820 660 aa22.47■■□□□ 1.19
HNF4A-208ENST00000609795 CDC5LQ99459 802 aaKnown RBP22.47■■□□□ 1.19
HNF4A-208ENST00000609795 CHMP4BQ9H444 224 aaKnown RBP22.47■■□□□ 1.19
HNF4A-208ENST00000609795 ZNF219Q9P2Y4 722 aaPredicted RBP22.47■■□□□ 1.19
HNF4A-208ENST00000609795 ANKRD18BA2A2Z9 1011 aa22.46■■□□□ 1.19
HNF4A-208ENST00000609795 PPEF1O14829 653 aaPredicted RBP22.46■■□□□ 1.19
HNF4A-208ENST00000609795 C21orf2O43822 256 aa22.46■■□□□ 1.19
HNF4A-208ENST00000609795 IFIT5Q13325 482 aaKnown RBP22.46■■□□□ 1.19
HNF4A-208ENST00000609795 C7orf43Q8WVR3 580 aa22.46■■□□□ 1.19
HNF4A-208ENST00000609795 CCDC57Q2TAC2 916 aa22.45■■□□□ 1.18
HNF4A-208ENST00000609795 TMC4Q7Z404 712 aa22.45■■□□□ 1.18
HNF4A-208ENST00000609795 ANKRD18AQ8IVF6 992 aa22.45■■□□□ 1.18
HNF4A-208ENST00000609795 GRIN3BO60391 1043 aa22.44■■□□□ 1.18
HNF4A-208ENST00000609795 COL4A1P02462 1669 aa22.44■■□□□ 1.18
HNF4A-208ENST00000609795 SP8Q8IXZ3 490 aa22.44■■□□□ 1.18
HNF4A-208ENST00000609795 ATP6V0A2Q9Y487 856 aa22.44■■□□□ 1.18
HNF4A-208ENST00000609795 SOGA3Q5TF21 947 aa22.43■■□□□ 1.18
HNF4A-208ENST00000609795 TMX4Q9H1E5 349 aaPredicted RBP22.43■■□□□ 1.18
HNF4A-208ENST00000609795 IGHMBP2P38935 993 aaKnown RBP22.42■■□□□ 1.18
HNF4A-208ENST00000609795 CC2D2BQ6DHV5 1058 aa22.42■■□□□ 1.18
HNF4A-208ENST00000609795 ZBTB40Q9NUA8 1239 aa22.42■■□□□ 1.18
HNF4A-208ENST00000609795 SPEF2Q9C093 1822 aa22.42■■□□□ 1.18
HNF4A-208ENST00000609795 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
HNF4A-208ENST00000609795 OLFM4Q6UX06 510 aa22.41■■□□□ 1.18
HNF4A-208ENST00000609795 ARHGAP27Q6ZUM4 889 aa22.41■■□□□ 1.18
HNF4A-208ENST00000609795 C1orf115Q9H7X2 142 aa22.41■■□□□ 1.18
HNF4A-208ENST00000609795 MTX1Q13505 466 aa22.4■■□□□ 1.18
HNF4A-208ENST00000609795 CCDC93Q567U6 631 aa22.4■■□□□ 1.18
HNF4A-208ENST00000609795 TAF7LQ5H9L4 462 aa22.4■■□□□ 1.18
HNF4A-208ENST00000609795 ZNF594Q96JF6 807 aaPredicted RBP22.4■■□□□ 1.18
HNF4A-208ENST00000609795 MPHOSPH8Q99549 860 aa22.4■■□□□ 1.18
HNF4A-208ENST00000609795 BSDC1Q9NW68 430 aaPredicted RBP22.4■■□□□ 1.18
HNF4A-208ENST00000609795 GRIPAP1Q4V328 841 aa22.39■■□□□ 1.17
HNF4A-208ENST00000609795 RTKN2Q8IZC4 609 aa22.39■■□□□ 1.17
HNF4A-208ENST00000609795 CRBNQ96SW2 442 aa22.39■■□□□ 1.17
HNF4A-208ENST00000609795 LRRC37AA6NMS7 1700 aa22.38■■□□□ 1.17
HNF4A-208ENST00000609795 SLC51AQ86UW1 340 aa22.38■■□□□ 1.17
HNF4A-208ENST00000609795 FER1L6Q2WGJ9 1857 aa22.38■■□□□ 1.17
HNF4A-208ENST00000609795 SRGAP3O43295 1099 aa22.37■■□□□ 1.17
HNF4A-208ENST00000609795 RFX5P48382 616 aaPredicted RBP22.37■■□□□ 1.17
HNF4A-208ENST00000609795 ATP8B2P98198 1209 aa22.37■■□□□ 1.17
HNF4A-208ENST00000609795 LDHAL6AQ6ZMR3 332 aa22.37■■□□□ 1.17
HNF4A-208ENST00000609795 MPNDQ8N594 471 aa22.36■■□□□ 1.17
HNF4A-208ENST00000609795 GOLGB1Q14789 3259 aaKnown RBP22.35■■□□□ 1.17
HNF4A-208ENST00000609795 PNMA6EA0A0J9YXQ4 647 aa22.35■■□□□ 1.17
HNF4A-208ENST00000609795 PTPN12Q05209 780 aaKnown RBP22.35■■□□□ 1.17
HNF4A-208ENST00000609795 KLHDC4Q8TBB5 520 aa22.35■■□□□ 1.17
HNF4A-208ENST00000609795 CNNM1Q9NRU3 951 aa22.35■■□□□ 1.17
HNF4A-208ENST00000609795 MINPP1Q9UNW1 487 aa22.35■■□□□ 1.17
HNF4A-208ENST00000609795 NSFL1CQ9UNZ2 370 aaKnown RBP22.35■■□□□ 1.17
HNF4A-208ENST00000609795 SNED1Q8TER0 1413 aa22.34■■□□□ 1.17
HNF4A-208ENST00000609795 NFKBIEO00221 500 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms