RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 RPGRQ92834 1020 aaKnown RBP27.11■■□□□ 1.93
NECAB3-221ENST00000607055 A0A0G2JLW4 131 aa27.1■■□□□ 1.93
NECAB3-221ENST00000607055 DPEP1P16444 411 aa27.1■■□□□ 1.93
NECAB3-221ENST00000607055 CCDC152Q4G0S7 254 aa27.1■■□□□ 1.93
NECAB3-221ENST00000607055 LMBR1LQ6UX01 489 aa27.1■■□□□ 1.93
NECAB3-221ENST00000607055 ANKRD44Q8N8A2 993 aa27.1■■□□□ 1.93
NECAB3-221ENST00000607055 ZBTB40Q9NUA8 1239 aa27.1■■□□□ 1.93
NECAB3-221ENST00000607055 PDZRN3Q9UPQ7 1066 aa27.1■■□□□ 1.93
NECAB3-221ENST00000607055 CHMP3Q9Y3E7 222 aa27.1■■□□□ 1.93
NECAB3-221ENST00000607055 SRGNP10124 158 aa27.09■■□□□ 1.93
NECAB3-221ENST00000607055 NLGN2Q8NFZ4 835 aa27.09■■□□□ 1.93
NECAB3-221ENST00000607055 COL11A2P13942 1736 aaPredicted RBP27.09■■□□□ 1.93
NECAB3-221ENST00000607055 CSF1RP07333 972 aa27.08■■□□□ 1.93
NECAB3-221ENST00000607055 NPR1P16066 1061 aa27.08■■□□□ 1.93
NECAB3-221ENST00000607055 EXOC6Q8TAG9 804 aa27.08■■□□□ 1.93
NECAB3-221ENST00000607055 ZNF622Q969S3 477 aaKnown RBP eCLIP27.08■■□□□ 1.93
NECAB3-221ENST00000607055 FAM161AQ3B820 660 aa27.07■■□□□ 1.92
NECAB3-221ENST00000607055 RABL6Q3YEC7 729 aaPredicted RBP27.07■■□□□ 1.92
NECAB3-221ENST00000607055 MASTLQ96GX5 879 aa27.07■■□□□ 1.92
NECAB3-221ENST00000607055 RBM17Q96I25 401 aaKnown RBP27.07■■□□□ 1.92
NECAB3-221ENST00000607055 SYT17Q9BSW7 474 aa27.07■■□□□ 1.92
NECAB3-221ENST00000607055 GREM2Q9H772 168 aa27.07■■□□□ 1.92
NECAB3-221ENST00000607055 MYH3P11055 1940 aa27.07■■□□□ 1.92
NECAB3-221ENST00000607055 DDX46Q7L014 1031 aaKnown RBP27.06■■□□□ 1.92
NECAB3-221ENST00000607055 KIAA1551Q9HCM1 1747 aa27.06■■□□□ 1.92
NECAB3-221ENST00000607055 STYK1Q6J9G0 422 aa27.05■■□□□ 1.92
NECAB3-221ENST00000607055 SEC31BQ9NQW1 1179 aa27.05■■□□□ 1.92
NECAB3-221ENST00000607055 KCNA3P22001 575 aa27.04■■□□□ 1.92
NECAB3-221ENST00000607055 HOXA10P31260 410 aaPredicted RBP27.04■■□□□ 1.92
NECAB3-221ENST00000607055 ITGA6P23229 1130 aa27.03■■□□□ 1.92
NECAB3-221ENST00000607055 RTL9Q8NET4 1388 aa27.03■■□□□ 1.92
NECAB3-221ENST00000607055 WWC3Q9ULE0 1092 aa27.03■■□□□ 1.92
NECAB3-221ENST00000607055 IFIT5Q13325 482 aaKnown RBP27.02■■□□□ 1.92
NECAB3-221ENST00000607055 CCDC57Q2TAC2 916 aa27.02■■□□□ 1.92
NECAB3-221ENST00000607055 CRAMP1Q96RY5 1269 aa27.02■■□□□ 1.92
NECAB3-221ENST00000607055 ANKRD18BA2A2Z9 1011 aa27.01■■□□□ 1.91
NECAB3-221ENST00000607055 NEFLP07196 543 aa27.01■■□□□ 1.91
NECAB3-221ENST00000607055 CNKSR1Q969H4 720 aa27.01■■□□□ 1.91
NECAB3-221ENST00000607055 PIM2Q9P1W9 311 aa27.01■■□□□ 1.91
NECAB3-221ENST00000607055 DLEC1Q9Y238 1755 aa27.01■■□□□ 1.91
NECAB3-221ENST00000607055 ALDH1B1P30837 517 aa27■■□□□ 1.91
NECAB3-221ENST00000607055 GRAPQ13588 217 aa27■■□□□ 1.91
NECAB3-221ENST00000607055 CEP85Q6P2H3 762 aa27■■□□□ 1.91
NECAB3-221ENST00000607055 GRAPLQ8TC17 118 aaPredicted RBP27■■□□□ 1.91
NECAB3-221ENST00000607055 CELF1Q92879 486 aaKnown RBP27■■□□□ 1.91
NECAB3-221ENST00000607055 SRGAP3O43295 1099 aa26.99■■□□□ 1.91
NECAB3-221ENST00000607055 MTX1Q13505 466 aa26.99■■□□□ 1.91
NECAB3-221ENST00000607055 TTLL6Q8N841 843 aa26.99■■□□□ 1.91
NECAB3-221ENST00000607055 CDC5LQ99459 802 aaKnown RBP26.99■■□□□ 1.91
NECAB3-221ENST00000607055 PNMA6EA0A0J9YXQ4 647 aa26.98■■□□□ 1.91
NECAB3-221ENST00000607055 ATP8B2P98198 1209 aa26.98■■□□□ 1.91
NECAB3-221ENST00000607055 TAF7LQ5H9L4 462 aa26.98■■□□□ 1.91
NECAB3-221ENST00000607055 COL4A1P02462 1669 aa26.98■■□□□ 1.91
NECAB3-221ENST00000607055 PRPF40BQ6NWY9 871 aaKnown RBP26.97■■□□□ 1.91
NECAB3-221ENST00000607055 ANKRD18AQ8IVF6 992 aa26.97■■□□□ 1.91
NECAB3-221ENST00000607055 ZNF594Q96JF6 807 aaPredicted RBP26.97■■□□□ 1.91
NECAB3-221ENST00000607055 TAF1P21675 1872 aa26.96■■□□□ 1.91
NECAB3-221ENST00000607055 RPS8P62241 208 aaKnown RBP26.96■■□□□ 1.91
NECAB3-221ENST00000607055 DALRD3Q5D0E6 543 aaKnown RBP26.96■■□□□ 1.91
NECAB3-221ENST00000607055 RPAP2Q8IXW5 612 aaPredicted RBP26.96■■□□□ 1.91
NECAB3-221ENST00000607055 PPEF1O14829 653 aaPredicted RBP26.95■■□□□ 1.9
NECAB3-221ENST00000607055 IGHMBP2P38935 993 aaKnown RBP26.95■■□□□ 1.9
NECAB3-221ENST00000607055 RFX5P48382 616 aaPredicted RBP26.95■■□□□ 1.9
NECAB3-221ENST00000607055 AAMPQ13685 434 aa26.95■■□□□ 1.9
NECAB3-221ENST00000607055 KLHDC4Q8TBB5 520 aa26.95■■□□□ 1.9
NECAB3-221ENST00000607055 ZNF219Q9P2Y4 722 aaPredicted RBP26.95■■□□□ 1.9
NECAB3-221ENST00000607055 BBOX1O75936 387 aa26.94■■□□□ 1.9
NECAB3-221ENST00000607055 BCS1LQ9Y276 419 aa26.94■■□□□ 1.9
NECAB3-221ENST00000607055 PCDHB15Q9Y5E8 787 aa26.94■■□□□ 1.9
NECAB3-221ENST00000607055 CACNA1SQ13698 1873 aa26.93■■□□□ 1.9
NECAB3-221ENST00000607055 POLA2Q14181 598 aa26.93■■□□□ 1.9
NECAB3-221ENST00000607055 SSH3Q8TE77 659 aa26.93■■□□□ 1.9
NECAB3-221ENST00000607055 MPHOSPH8Q99549 860 aa26.93■■□□□ 1.9
NECAB3-221ENST00000607055 BRCA1P38398 1863 aaKnown RBP26.92■■□□□ 1.9
NECAB3-221ENST00000607055 SIRT2Q8IXJ6 389 aa26.92■■□□□ 1.9
NECAB3-221ENST00000607055 PA2G4Q9UQ80 394 aaKnown RBP26.92■■□□□ 1.9
NECAB3-221ENST00000607055 SLX4Q8IY92 1834 aa26.92■■□□□ 1.9
NECAB3-221ENST00000607055 PTPN12Q05209 780 aaKnown RBP26.91■■□□□ 1.9
NECAB3-221ENST00000607055 SLC51AQ86UW1 340 aa26.91■■□□□ 1.9
NECAB3-221ENST00000607055 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
NECAB3-221ENST00000607055 HMMRO75330 724 aa26.9■■□□□ 1.9
NECAB3-221ENST00000607055 LDHAL6AQ6ZMR3 332 aa26.9■■□□□ 1.9
NECAB3-221ENST00000607055 TMC4Q7Z404 712 aa26.9■■□□□ 1.9
NECAB3-221ENST00000607055 PUS3Q9BZE2 481 aaKnown RBP26.9■■□□□ 1.9
NECAB3-221ENST00000607055 SIL1Q9H173 461 aa26.9■■□□□ 1.9
NECAB3-221ENST00000607055 BSDC1Q9NW68 430 aaPredicted RBP26.9■■□□□ 1.9
NECAB3-221ENST00000607055 SPEF2Q9C093 1822 aa26.9■■□□□ 1.9
NECAB3-221ENST00000607055 C21orf2O43822 256 aa26.89■■□□□ 1.9
NECAB3-221ENST00000607055 OLFM4Q6UX06 510 aa26.89■■□□□ 1.9
NECAB3-221ENST00000607055 COPRSQ9NQ92 184 aa26.89■■□□□ 1.9
NECAB3-221ENST00000607055 CNNM1Q9NRU3 951 aa26.89■■□□□ 1.9
NECAB3-221ENST00000607055 ATP6V0A2Q9Y487 856 aa26.89■■□□□ 1.9
NECAB3-221ENST00000607055 C7orf43Q8WVR3 580 aa26.88■■□□□ 1.89
NECAB3-221ENST00000607055 LRRC24Q50LG9 513 aa26.87■■□□□ 1.89
NECAB3-221ENST00000607055 SP8Q8IXZ3 490 aa26.87■■□□□ 1.89
NECAB3-221ENST00000607055 TMX4Q9H1E5 349 aaPredicted RBP26.87■■□□□ 1.89
NECAB3-221ENST00000607055 EYA2O00167 538 aa26.86■■□□□ 1.89
NECAB3-221ENST00000607055 SURF6O75683 361 aaKnown RBP26.85■■□□□ 1.89
NECAB3-221ENST00000607055 MINPP1Q9UNW1 487 aa26.85■■□□□ 1.89
NECAB3-221ENST00000607055 SRCAPQ6ZRS2 3230 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms