RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 CAPN10Q9HC96 672 aa7.84□□□□□ -1.15
LINC00397-202ENST00000606785 FOXD3Q9UJU5 478 aaPredicted RBP7.84□□□□□ -1.15
LINC00397-202ENST00000606785 ATP4AP20648 1035 aa7.83□□□□□ -1.16
LINC00397-202ENST00000606785 KRT76Q01546 638 aa7.83□□□□□ -1.16
LINC00397-202ENST00000606785 WDR44Q5JSH3 913 aa7.83□□□□□ -1.16
LINC00397-202ENST00000606785 ZNF438Q7Z4V0 828 aa7.83□□□□□ -1.16
LINC00397-202ENST00000606785 BTLAQ7Z6A9 289 aa7.83□□□□□ -1.16
LINC00397-202ENST00000606785 LINC00528Q8N1L1 170 aa7.83□□□□□ -1.16
LINC00397-202ENST00000606785 CCDC74AQ96AQ1 378 aa7.83□□□□□ -1.16
LINC00397-202ENST00000606785 ACBD3Q9H3P7 528 aa7.83□□□□□ -1.16
LINC00397-202ENST00000606785 C12orf49Q9H741 205 aa7.83□□□□□ -1.16
LINC00397-202ENST00000606785 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.83□□□□□ -1.16
LINC00397-202ENST00000606785 UPP2O95045 317 aa7.82□□□□□ -1.16
LINC00397-202ENST00000606785 CTSOP43234 321 aaPredicted RBP7.82□□□□□ -1.16
LINC00397-202ENST00000606785 POU4F2Q12837 409 aa7.82□□□□□ -1.16
LINC00397-202ENST00000606785 GNL2Q13823 731 aaKnown RBP7.82□□□□□ -1.16
LINC00397-202ENST00000606785 USPL1Q5W0Q7 1092 aa7.82□□□□□ -1.16
LINC00397-202ENST00000606785 ZFYVE28Q9HCC9 887 aa7.82□□□□□ -1.16
LINC00397-202ENST00000606785 NLRP2Q9NX02 1062 aa7.82□□□□□ -1.16
LINC00397-202ENST00000606785 USP20Q9Y2K6 914 aa7.82□□□□□ -1.16
LINC00397-202ENST00000606785 RTCBQ9Y3I0 505 aaKnown RBP7.82□□□□□ -1.16
LINC00397-202ENST00000606785 KCNMB2Q9Y691 235 aa7.82□□□□□ -1.16
LINC00397-202ENST00000606785 UBAP1LF5GYI3 381 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 PTPN12Q05209 780 aaKnown RBP7.81□□□□□ -1.16
LINC00397-202ENST00000606785 TRIP4Q15650 581 aaPredicted RBP7.81□□□□□ -1.16
LINC00397-202ENST00000606785 C6orf118Q5T5N4 469 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 GPAT2Q6NUI2 795 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 PI16Q6UXB8 463 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 FAM177A1Q8N128 213 aaPredicted RBP7.81□□□□□ -1.16
LINC00397-202ENST00000606785 CMTR1Q8N1G2 835 aaKnown RBP7.81□□□□□ -1.16
LINC00397-202ENST00000606785 EPS8L3Q8TE67 593 aaKnown RBP7.81□□□□□ -1.16
LINC00397-202ENST00000606785 CNTNAP3BQ96NU0 1288 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 ZIC5Q96T25 663 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 CNTNAP3Q9BZ76 1288 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 OSBPL7Q9BZF2 842 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 ELP3Q9H9T3 547 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 NEUROD4Q9HD90 331 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 DDX41Q9UJV9 622 aaKnown RBP7.81□□□□□ -1.16
LINC00397-202ENST00000606785 USP31Q70CQ4 1352 aa7.81□□□□□ -1.16
LINC00397-202ENST00000606785 PHACTR2O75167 634 aa7.8□□□□□ -1.16
LINC00397-202ENST00000606785 IRS1P35568 1242 aa7.8□□□□□ -1.16
LINC00397-202ENST00000606785 LRRC69Q6ZNQ3 347 aa7.8□□□□□ -1.16
LINC00397-202ENST00000606785 HS2ST1Q7LGA3 356 aa7.8□□□□□ -1.16
LINC00397-202ENST00000606785 ZNF654Q8IZM8 581 aa7.8□□□□□ -1.16
LINC00397-202ENST00000606785 RNF217Q8TC41 542 aa7.8□□□□□ -1.16
LINC00397-202ENST00000606785 FAM8A1Q9UBU6 413 aa7.8□□□□□ -1.16
LINC00397-202ENST00000606785 PRKAG2Q9UGJ0 569 aa7.8□□□□□ -1.16
LINC00397-202ENST00000606785 A0A1B0GTH6 734 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 EPB42P16452 691 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 TNNI2P48788 182 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 ZNF394Q53GI3 561 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 ARSJQ5FYB0 599 aaPredicted RBP7.79□□□□□ -1.16
LINC00397-202ENST00000606785 ZNF385CQ66K41 422 aaPredicted RBP7.79□□□□□ -1.16
LINC00397-202ENST00000606785 KANK3Q6NY19 840 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 LYSMD3Q7Z3D4 306 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 PRICKLE2Q7Z3G6 844 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 USP48Q86UV5 1035 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 GPR161Q8N6U8 529 aaKnown RBP7.79□□□□□ -1.16
LINC00397-202ENST00000606785 GMLQ99445 158 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 SRCIN1Q9C0H9 1055 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 TMEM63CQ9P1W3 806 aa7.79□□□□□ -1.16
LINC00397-202ENST00000606785 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
LINC00397-202ENST00000606785 BMP2P12643 396 aa7.78□□□□□ -1.16
LINC00397-202ENST00000606785 ATP2B1P20020 1258 aa7.78□□□□□ -1.16
LINC00397-202ENST00000606785 ST13P50502 369 aaKnown RBP7.78□□□□□ -1.16
LINC00397-202ENST00000606785 RACK1P63244 317 aaKnown RBP7.78□□□□□ -1.16
LINC00397-202ENST00000606785 TAF1CQ15572 869 aaPredicted RBP7.78□□□□□ -1.16
LINC00397-202ENST00000606785 XP32Q5T750 250 aa7.78□□□□□ -1.16
LINC00397-202ENST00000606785 SVOPQ8N4V2 548 aa7.78□□□□□ -1.16
LINC00397-202ENST00000606785 NPHS2Q9NP85 383 aa7.78□□□□□ -1.16
LINC00397-202ENST00000606785 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
LINC00397-202ENST00000606785 PCDHGB7Q9Y5F8 929 aa7.78□□□□□ -1.16
LINC00397-202ENST00000606785 HMGB1P09429 215 aaKnown RBP7.77□□□□□ -1.17
LINC00397-202ENST00000606785 USP17L7P0C7H9 530 aa7.77□□□□□ -1.17
LINC00397-202ENST00000606785 MSX1P28360 303 aa7.77□□□□□ -1.17
LINC00397-202ENST00000606785 TYRO3Q06418 890 aa7.77□□□□□ -1.17
LINC00397-202ENST00000606785 ARMC5Q96C12 935 aa7.77□□□□□ -1.17
LINC00397-202ENST00000606785 PUS7Q96PZ0 661 aaKnown RBP7.77□□□□□ -1.17
LINC00397-202ENST00000606785 CHRDQ9H2X0 955 aa7.77□□□□□ -1.17
LINC00397-202ENST00000606785 SRA1Q9HD15 236 aaKnown RBP7.77□□□□□ -1.17
LINC00397-202ENST00000606785 TIMMDC1Q9NPL8 285 aa7.77□□□□□ -1.17
LINC00397-202ENST00000606785 GGT7Q9UJ14 662 aa7.77□□□□□ -1.17
LINC00397-202ENST00000606785 INPP5FQ9Y2H2 1132 aa7.77□□□□□ -1.17
LINC00397-202ENST00000606785 A0A1W2PNR3 127 aa7.76□□□□□ -1.17
LINC00397-202ENST00000606785 XYLBO75191 536 aa7.76□□□□□ -1.17
LINC00397-202ENST00000606785 EGFRP00533 1210 aa7.76□□□□□ -1.17
LINC00397-202ENST00000606785 CANXP27824 592 aaKnown RBP7.76□□□□□ -1.17
LINC00397-202ENST00000606785 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
LINC00397-202ENST00000606785 MEI1Q5TIA1 1274 aa7.76□□□□□ -1.17
LINC00397-202ENST00000606785 DPH6Q7L8W6 267 aa7.76□□□□□ -1.17
LINC00397-202ENST00000606785 GALNT12Q8IXK2 581 aa7.76□□□□□ -1.17
LINC00397-202ENST00000606785 NANOS1Q8WY41 292 aaKnown RBP7.76□□□□□ -1.17
LINC00397-202ENST00000606785 COL25A1Q9BXS0 654 aaPredicted RBP7.76□□□□□ -1.17
LINC00397-202ENST00000606785 C11orf16Q9NQ32 467 aa7.76□□□□□ -1.17
LINC00397-202ENST00000606785 SMARCA5O60264 1052 aaPredicted RBP7.75□□□□□ -1.17
LINC00397-202ENST00000606785 POLR3DP05423 398 aaPredicted RBP7.75□□□□□ -1.17
LINC00397-202ENST00000606785 SLURP2P0DP57 97 aa7.75□□□□□ -1.17
LINC00397-202ENST00000606785 DNAJA1P31689 397 aaKnown RBP7.75□□□□□ -1.17
LINC00397-202ENST00000606785 ARID5AQ03989 594 aa7.75□□□□□ -1.17
LINC00397-202ENST00000606785 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms