RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ANKRD44Q8N8A2 993 aa9.64□□□□□ -0.87
MSH6-211ENST00000606499 CCDC85AQ96PX6 553 aaPredicted RBP9.64□□□□□ -0.87
MSH6-211ENST00000606499 BRIP1Q9BX63 1249 aa9.64□□□□□ -0.87
MSH6-211ENST00000606499 LRRC37AA6NMS7 1700 aa9.63□□□□□ -0.87
MSH6-211ENST00000606499 NEFLP07196 543 aa9.63□□□□□ -0.87
MSH6-211ENST00000606499 LMBR1LQ6UX01 489 aa9.63□□□□□ -0.87
MSH6-211ENST00000606499 KLHL34Q8N239 644 aa9.63□□□□□ -0.87
MSH6-211ENST00000606499 PLA2G12BQ9BX93 195 aa9.63□□□□□ -0.87
MSH6-211ENST00000606499 PPP1R1BQ9UD71 204 aaPredicted RBP9.63□□□□□ -0.87
MSH6-211ENST00000606499 CHRNA5P30532 468 aa9.62□□□□□ -0.87
MSH6-211ENST00000606499 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
MSH6-211ENST00000606499 RABL6Q3YEC7 729 aaPredicted RBP9.62□□□□□ -0.87
MSH6-211ENST00000606499 TTLL11Q8NHH1 800 aa9.62□□□□□ -0.87
MSH6-211ENST00000606499 NLRP3Q96P20 1036 aa9.62□□□□□ -0.87
MSH6-211ENST00000606499 GREM2Q9H772 168 aa9.62□□□□□ -0.87
MSH6-211ENST00000606499 CHMP3Q9Y3E7 222 aa9.62□□□□□ -0.87
MSH6-211ENST00000606499 RTL9Q8NET4 1388 aa9.62□□□□□ -0.87
MSH6-211ENST00000606499 PNMA6EA0A0J9YXQ4 647 aa9.61□□□□□ -0.87
MSH6-211ENST00000606499 KLRG2A4D1S0 409 aaPredicted RBP9.61□□□□□ -0.87
MSH6-211ENST00000606499 CSF1RP07333 972 aa9.61□□□□□ -0.87
MSH6-211ENST00000606499 HSP90B1P14625 803 aaKnown RBP9.61□□□□□ -0.87
MSH6-211ENST00000606499 PDE6BP35913 854 aa9.61□□□□□ -0.87
MSH6-211ENST00000606499 CRY2Q49AN0 593 aa9.61□□□□□ -0.87
MSH6-211ENST00000606499 CEP85Q6P2H3 762 aa9.61□□□□□ -0.87
MSH6-211ENST00000606499 C2CD5Q86YS7 1000 aa9.61□□□□□ -0.87
MSH6-211ENST00000606499 CHMP4BQ9H444 224 aaKnown RBP9.61□□□□□ -0.87
MSH6-211ENST00000606499 SEC31BQ9NQW1 1179 aa9.61□□□□□ -0.87
MSH6-211ENST00000606499 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
MSH6-211ENST00000606499 SLX4Q8IY92 1834 aa9.61□□□□□ -0.87
MSH6-211ENST00000606499 A0A0G2JLW4 131 aa9.6□□□□□ -0.87
MSH6-211ENST00000606499 SRGAP3O43295 1099 aa9.6□□□□□ -0.87
MSH6-211ENST00000606499 SRGNP10124 158 aa9.6□□□□□ -0.87
MSH6-211ENST00000606499 ITGA6P23229 1130 aa9.6□□□□□ -0.87
MSH6-211ENST00000606499 MTX1Q13505 466 aa9.6□□□□□ -0.87
MSH6-211ENST00000606499 SF3B3Q15393 1217 aaKnown RBP9.6□□□□□ -0.87
MSH6-211ENST00000606499 CCDC152Q4G0S7 254 aa9.6□□□□□ -0.87
MSH6-211ENST00000606499 SLC51AQ86UW1 340 aa9.6□□□□□ -0.87
MSH6-211ENST00000606499 SIRT2Q8IXJ6 389 aa9.6□□□□□ -0.87
MSH6-211ENST00000606499 NLGN2Q8NFZ4 835 aa9.6□□□□□ -0.87
MSH6-211ENST00000606499 RPGRQ92834 1020 aaKnown RBP9.6□□□□□ -0.87
MSH6-211ENST00000606499 FHDC1Q9C0D6 1143 aaPredicted RBP9.6□□□□□ -0.87
MSH6-211ENST00000606499 HDAC5Q9UQL6 1122 aa9.6□□□□□ -0.87
MSH6-211ENST00000606499 LTBP1Q14766 1721 aa9.59□□□□□ -0.87
MSH6-211ENST00000606499 UTRNP46939 3433 aa9.59□□□□□ -0.87
MSH6-211ENST00000606499 ARFGEF1Q9Y6D6 1849 aa9.59□□□□□ -0.87
MSH6-211ENST00000606499 H0YIN7 160 aa9.59□□□□□ -0.87
MSH6-211ENST00000606499 DPEP1P16444 411 aa9.59□□□□□ -0.87
MSH6-211ENST00000606499 KLHDC4Q8TBB5 520 aa9.59□□□□□ -0.87
MSH6-211ENST00000606499 ZNF594Q96JF6 807 aaPredicted RBP9.59□□□□□ -0.87
MSH6-211ENST00000606499 WWC3Q9ULE0 1092 aa9.59□□□□□ -0.87
MSH6-211ENST00000606499 CD2APQ9Y5K6 639 aa9.59□□□□□ -0.87
MSH6-211ENST00000606499 ANKRD18BA2A2Z9 1011 aa9.58□□□□□ -0.88
MSH6-211ENST00000606499 NPR1P16066 1061 aa9.58□□□□□ -0.88
MSH6-211ENST00000606499 KCNA3P22001 575 aa9.58□□□□□ -0.88
MSH6-211ENST00000606499 HOXA10P31260 410 aaPredicted RBP9.58□□□□□ -0.88
MSH6-211ENST00000606499 RFX5P48382 616 aaPredicted RBP9.58□□□□□ -0.88
MSH6-211ENST00000606499 TGFB2P61812 414 aa9.58□□□□□ -0.88
MSH6-211ENST00000606499 ATP8B2P98198 1209 aa9.58□□□□□ -0.88
MSH6-211ENST00000606499 IFIT5Q13325 482 aaKnown RBP9.58□□□□□ -0.88
MSH6-211ENST00000606499 AAMPQ13685 434 aa9.58□□□□□ -0.88
MSH6-211ENST00000606499 CCDC57Q2TAC2 916 aa9.58□□□□□ -0.88
MSH6-211ENST00000606499 DDX46Q7L014 1031 aaKnown RBP9.58□□□□□ -0.88
MSH6-211ENST00000606499 SSH3Q8TE77 659 aa9.58□□□□□ -0.88
MSH6-211ENST00000606499 CELF1Q92879 486 aaKnown RBP9.58□□□□□ -0.88
MSH6-211ENST00000606499 ZNF622Q969S3 477 aaKnown RBP eCLIP9.58□□□□□ -0.88
MSH6-211ENST00000606499 MASTLQ96GX5 879 aa9.58□□□□□ -0.88
MSH6-211ENST00000606499 RBM17Q96I25 401 aaKnown RBP9.58□□□□□ -0.88
MSH6-211ENST00000606499 PA2G4Q9UQ80 394 aaKnown RBP9.58□□□□□ -0.88
MSH6-211ENST00000606499 ARAP2Q8WZ64 1704 aa9.57□□□□□ -0.88
MSH6-211ENST00000606499 PTPN12Q05209 780 aaKnown RBP9.57□□□□□ -0.88
MSH6-211ENST00000606499 GRAPQ13588 217 aa9.57□□□□□ -0.88
MSH6-211ENST00000606499 POLA2Q14181 598 aa9.57□□□□□ -0.88
MSH6-211ENST00000606499 TAF7LQ5H9L4 462 aa9.57□□□□□ -0.88
MSH6-211ENST00000606499 STYK1Q6J9G0 422 aa9.57□□□□□ -0.88
MSH6-211ENST00000606499 PRPF40BQ6NWY9 871 aaKnown RBP9.57□□□□□ -0.88
MSH6-211ENST00000606499 RPAP2Q8IXW5 612 aaPredicted RBP9.57□□□□□ -0.88
MSH6-211ENST00000606499 GRAPLQ8TC17 118 aaPredicted RBP9.57□□□□□ -0.88
MSH6-211ENST00000606499 CRAMP1Q96RY5 1269 aa9.57□□□□□ -0.88
MSH6-211ENST00000606499 SIL1Q9H173 461 aa9.57□□□□□ -0.88
MSH6-211ENST00000606499 DUOX1Q9NRD9 1551 aa9.57□□□□□ -0.88
MSH6-211ENST00000606499 PPEF1O14829 653 aaPredicted RBP9.56□□□□□ -0.88
MSH6-211ENST00000606499 ANKRD18AQ8IVF6 992 aa9.56□□□□□ -0.88
MSH6-211ENST00000606499 CDC5LQ99459 802 aaKnown RBP9.56□□□□□ -0.88
MSH6-211ENST00000606499 SYT17Q9BSW7 474 aa9.56□□□□□ -0.88
MSH6-211ENST00000606499 PUS3Q9BZE2 481 aaKnown RBP9.56□□□□□ -0.88
MSH6-211ENST00000606499 PDZRN3Q9UPQ7 1066 aa9.56□□□□□ -0.88
MSH6-211ENST00000606499 HMMRO75330 724 aa9.55□□□□□ -0.88
MSH6-211ENST00000606499 ALDH1B1P30837 517 aa9.55□□□□□ -0.88
MSH6-211ENST00000606499 IGHMBP2P38935 993 aaKnown RBP9.55□□□□□ -0.88
MSH6-211ENST00000606499 RPS8P62241 208 aaKnown RBP9.55□□□□□ -0.88
MSH6-211ENST00000606499 LRRC24Q50LG9 513 aa9.55□□□□□ -0.88
MSH6-211ENST00000606499 OLFM4Q6UX06 510 aa9.55□□□□□ -0.88
MSH6-211ENST00000606499 LDHAL6AQ6ZMR3 332 aa9.55□□□□□ -0.88
MSH6-211ENST00000606499 COPRSQ9NQ92 184 aa9.55□□□□□ -0.88
MSH6-211ENST00000606499 ZNF219Q9P2Y4 722 aaPredicted RBP9.55□□□□□ -0.88
MSH6-211ENST00000606499 EXOC6BQ9Y2D4 811 aa9.55□□□□□ -0.88
MSH6-211ENST00000606499 FER1L6Q2WGJ9 1857 aa9.55□□□□□ -0.88
MSH6-211ENST00000606499 APBB1O00213 710 aa9.54□□□□□ -0.88
MSH6-211ENST00000606499 SURF6O75683 361 aaKnown RBP9.54□□□□□ -0.88
MSH6-211ENST00000606499 IGHDP01880 384 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms