RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 DPY19L2Q6NUT2 758 aa15.78■□□□□ 0.12
CTSA-210ENST00000606000 CCDC191Q8NCU4 936 aa15.78■□□□□ 0.12
CTSA-210ENST00000606000 CWC25Q9NXE8 425 aaPredicted RBP15.78■□□□□ 0.12
CTSA-210ENST00000606000 CACNA1FO60840 1977 aa15.77■□□□□ 0.12
CTSA-210ENST00000606000 PCCAP05165 728 aaPredicted RBP15.77■□□□□ 0.12
CTSA-210ENST00000606000 SF3B3Q15393 1217 aaKnown RBP15.77■□□□□ 0.12
CTSA-210ENST00000606000 RBM46Q8TBY0 533 aaKnown RBP15.77■□□□□ 0.12
CTSA-210ENST00000606000 CCDC85AQ96PX6 553 aaPredicted RBP15.77■□□□□ 0.12
CTSA-210ENST00000606000 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.12
CTSA-210ENST00000606000 MYH16Q9H6N6 1097 aa15.77■□□□□ 0.12
CTSA-210ENST00000606000 MYH3P11055 1940 aa15.76■□□□□ 0.11
CTSA-210ENST00000606000 VEGFAP15692 232 aaPredicted RBP15.76■□□□□ 0.11
CTSA-210ENST00000606000 FKBP5Q13451 457 aaPredicted RBP15.76■□□□□ 0.11
CTSA-210ENST00000606000 AOC3Q16853 763 aa15.76■□□□□ 0.11
CTSA-210ENST00000606000 SP8Q8IXZ3 490 aa15.76■□□□□ 0.11
CTSA-210ENST00000606000 SEC31BQ9NQW1 1179 aa15.76■□□□□ 0.11
CTSA-210ENST00000606000 NEURL1BA8MQ27 555 aa15.75■□□□□ 0.11
CTSA-210ENST00000606000 FZD9O00144 591 aa15.75■□□□□ 0.11
CTSA-210ENST00000606000 BBOX1O75936 387 aa15.75■□□□□ 0.11
CTSA-210ENST00000606000 POTEIP0CG38 1075 aa15.75■□□□□ 0.11
CTSA-210ENST00000606000 POTEJP0CG39 1038 aa15.75■□□□□ 0.11
CTSA-210ENST00000606000 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
CTSA-210ENST00000606000 SCN4AP35499 1836 aa15.75■□□□□ 0.11
CTSA-210ENST00000606000 F6X3S4 739 aa15.74■□□□□ 0.11
CTSA-210ENST00000606000 PPIP5K2O43314 1243 aa15.74■□□□□ 0.11
CTSA-210ENST00000606000 DPP8Q6V1X1 898 aaPredicted RBP15.74■□□□□ 0.11
CTSA-210ENST00000606000 CDHR2Q9BYE9 1310 aa15.73■□□□□ 0.11
CTSA-210ENST00000606000 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
CTSA-210ENST00000606000 PDE8AO60658 829 aa15.73■□□□□ 0.11
CTSA-210ENST00000606000 HTRA3P83110 453 aa15.73■□□□□ 0.11
CTSA-210ENST00000606000 NEXNQ0ZGT2 675 aa15.73■□□□□ 0.11
CTSA-210ENST00000606000 MPNDQ8N594 471 aa15.73■□□□□ 0.11
CTSA-210ENST00000606000 DNAAF4Q8WXU2 420 aa15.73■□□□□ 0.11
CTSA-210ENST00000606000 JDP2Q8WYK2 163 aa15.73■□□□□ 0.11
CTSA-210ENST00000606000 CDCA7LQ96GN5 454 aa15.73■□□□□ 0.11
CTSA-210ENST00000606000 RTFDC1Q9BY42 306 aaPredicted RBP15.73■□□□□ 0.11
CTSA-210ENST00000606000 ADAMTSL1Q8N6G6 1762 aa15.72■□□□□ 0.11
CTSA-210ENST00000606000 GPSM2P81274 684 aa15.72■□□□□ 0.11
CTSA-210ENST00000606000 GRIPAP1Q4V328 841 aa15.72■□□□□ 0.11
CTSA-210ENST00000606000 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
CTSA-210ENST00000606000 L3MBTL3Q96JM7 780 aaPredicted RBP15.72■□□□□ 0.11
CTSA-210ENST00000606000 GPR101Q96P66 508 aaPredicted RBP15.72■□□□□ 0.11
CTSA-210ENST00000606000 TMX4Q9H1E5 349 aaPredicted RBP15.72■□□□□ 0.11
CTSA-210ENST00000606000 GJA3Q9Y6H8 435 aa15.72■□□□□ 0.11
CTSA-210ENST00000606000 CTSWP56202 376 aa15.71■□□□□ 0.11
CTSA-210ENST00000606000 FSTL1Q12841 308 aa15.71■□□□□ 0.11
CTSA-210ENST00000606000 NIM1KQ8IY84 436 aa15.71■□□□□ 0.11
CTSA-210ENST00000606000 SMC1BQ8NDV3 1235 aa15.71■□□□□ 0.11
CTSA-210ENST00000606000 H7C1W4 665 aa15.7■□□□□ 0.1
CTSA-210ENST00000606000 EIF6P56537 245 aaKnown RBP15.7■□□□□ 0.1
CTSA-210ENST00000606000 SLFN5Q08AF3 891 aa15.7■□□□□ 0.1
CTSA-210ENST00000606000 GCKRQ14397 625 aa15.7■□□□□ 0.1
CTSA-210ENST00000606000 CCDC152Q4G0S7 254 aa15.7■□□□□ 0.1
CTSA-210ENST00000606000 TAF1DQ9H5J8 278 aaPredicted RBP15.7■□□□□ 0.1
CTSA-210ENST00000606000 NSFL1CQ9UNZ2 370 aaKnown RBP15.7■□□□□ 0.1
CTSA-210ENST00000606000 CASP7P55210 303 aa15.69■□□□□ 0.1
CTSA-210ENST00000606000 RPS8P62241 208 aaKnown RBP15.69■□□□□ 0.1
CTSA-210ENST00000606000 KIAA2012Q0VF49 1180 aa15.69■□□□□ 0.1
CTSA-210ENST00000606000 TMC4Q7Z404 712 aa15.69■□□□□ 0.1
CTSA-210ENST00000606000 GPC2Q8N158 579 aa15.69■□□□□ 0.1
CTSA-210ENST00000606000 SUPT20HQ8NEM7 779 aa15.69■□□□□ 0.1
CTSA-210ENST00000606000 GREM2Q9H772 168 aa15.69■□□□□ 0.1
CTSA-210ENST00000606000 POLLQ9UGP5 575 aa15.69■□□□□ 0.1
CTSA-210ENST00000606000 E9PSI1 815 aa15.68■□□□□ 0.1
CTSA-210ENST00000606000 BEND3Q5T5X7 828 aa15.68■□□□□ 0.1
CTSA-210ENST00000606000 MIER1Q8N108 512 aa15.68■□□□□ 0.1
CTSA-210ENST00000606000 LINS1Q8NG48 757 aa15.68■□□□□ 0.1
CTSA-210ENST00000606000 TTLL11Q8NHH1 800 aa15.68■□□□□ 0.1
CTSA-210ENST00000606000 HACL1Q9UJ83 578 aa15.68■□□□□ 0.1
CTSA-210ENST00000606000 IQCA1LA6NCM1 817 aa15.67■□□□□ 0.1
CTSA-210ENST00000606000 YDJCA8MPS7 323 aa15.67■□□□□ 0.1
CTSA-210ENST00000606000 RIMBP2O15034 1052 aa15.67■□□□□ 0.1
CTSA-210ENST00000606000 HSP90B1P14625 803 aaKnown RBP15.67■□□□□ 0.1
CTSA-210ENST00000606000 EPHX2P34913 555 aa15.67■□□□□ 0.1
CTSA-210ENST00000606000 SCNN1DP51172 638 aa15.67■□□□□ 0.1
CTSA-210ENST00000606000 APLP1P51693 650 aa15.67■□□□□ 0.1
CTSA-210ENST00000606000 CXCL9Q07325 125 aa15.67■□□□□ 0.1
CTSA-210ENST00000606000 EAPPQ56P03 285 aaPredicted RBP15.67■□□□□ 0.1
CTSA-210ENST00000606000 DIEXFQ68CQ4 756 aaKnown RBP15.67■□□□□ 0.1
CTSA-210ENST00000606000 BCL2L13Q9BXK5 485 aa15.67■□□□□ 0.1
CTSA-210ENST00000606000 ZNRF3Q9ULT6 936 aa15.67■□□□□ 0.1
CTSA-210ENST00000606000 A0A1B0GUL6 1792 aa15.67■□□□□ 0.1
CTSA-210ENST00000606000 C6orf229H3BNL8 230 aa15.66■□□□□ 0.1
CTSA-210ENST00000606000 RAD17O75943 681 aa15.66■□□□□ 0.1
CTSA-210ENST00000606000 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
CTSA-210ENST00000606000 ANKRD18AQ8IVF6 992 aa15.66■□□□□ 0.1
CTSA-210ENST00000606000 MRPL50Q8N5N7 158 aaKnown RBP15.66■□□□□ 0.1
CTSA-210ENST00000606000 TBC1D16Q8TBP0 767 aa15.66■□□□□ 0.1
CTSA-210ENST00000606000 VPS33BQ9H267 617 aa15.66■□□□□ 0.1
CTSA-210ENST00000606000 DBNDD1Q9H9R9 158 aa15.66■□□□□ 0.1
CTSA-210ENST00000606000 WTIPA6NIX2 430 aaPredicted RBP15.65■□□□□ 0.1
CTSA-210ENST00000606000 EPS15P42566 896 aa15.65■□□□□ 0.1
CTSA-210ENST00000606000 WASHC4Q2M389 1173 aa15.65■□□□□ 0.1
CTSA-210ENST00000606000 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
CTSA-210ENST00000606000 SLC4A10Q6U841 1118 aa15.65■□□□□ 0.1
CTSA-210ENST00000606000 SCN9AQ15858 1988 aa15.65■□□□□ 0.1
CTSA-210ENST00000606000 RTL9Q8NET4 1388 aa15.64■□□□□ 0.09
CTSA-210ENST00000606000 UFL1O94874 794 aa15.64■□□□□ 0.09
CTSA-210ENST00000606000 DOK7Q18PE1 504 aa15.64■□□□□ 0.09
CTSA-210ENST00000606000 LDHDQ86WU2 507 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms