RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 SNED1Q8TER0 1413 aa20.06■□□□□ 0.8
IRF3-226ENST00000600453 RTFDC1Q9BY42 306 aaPredicted RBP20.06■□□□□ 0.8
IRF3-226ENST00000600453 MAP3K2Q9Y2U5 619 aa20.06■□□□□ 0.8
IRF3-226ENST00000600453 PI4KAP2A4QPH2 592 aa20.05■□□□□ 0.8
IRF3-226ENST00000600453 RTL5Q5HYW3 569 aaPredicted RBP20.05■□□□□ 0.8
IRF3-226ENST00000600453 NIM1KQ8IY84 436 aa20.05■□□□□ 0.8
IRF3-226ENST00000600453 PI4KAP1Q8N8J0 262 aa20.05■□□□□ 0.8
IRF3-226ENST00000600453 FANCIQ9NVI1 1328 aa20.04■□□□□ 0.8
IRF3-226ENST00000600453 PPIP5K2O43314 1243 aa20.04■□□□□ 0.8
IRF3-226ENST00000600453 ZNF428Q96B54 188 aa20.04■□□□□ 0.8
IRF3-226ENST00000600453 HACL1Q9UJ83 578 aa20.04■□□□□ 0.8
IRF3-226ENST00000600453 CACNA1FO60840 1977 aa20.04■□□□□ 0.8
IRF3-226ENST00000600453 SCN4AP35499 1836 aa20.04■□□□□ 0.8
IRF3-226ENST00000600453 PDE8AO60658 829 aa20.03■□□□□ 0.8
IRF3-226ENST00000600453 VAMP4O75379 141 aa20.03■□□□□ 0.8
IRF3-226ENST00000600453 RPS8P62241 208 aaKnown RBP20.03■□□□□ 0.8
IRF3-226ENST00000600453 CHADLQ6NUI6 762 aa20.03■□□□□ 0.8
IRF3-226ENST00000600453 PNMA8AQ86V59 439 aaPredicted RBP20.03■□□□□ 0.8
IRF3-226ENST00000600453 LAMB2P55268 1798 aa20.03■□□□□ 0.8
IRF3-226ENST00000600453 ZNF541Q9H0D2 1346 aa20.02■□□□□ 0.8
IRF3-226ENST00000600453 CCDC152Q4G0S7 254 aa20.02■□□□□ 0.8
IRF3-226ENST00000600453 TAF1DQ9H5J8 278 aaPredicted RBP20.02■□□□□ 0.8
IRF3-226ENST00000600453 LMOD1P29536 600 aaPredicted RBP20.01■□□□□ 0.79
IRF3-226ENST00000600453 EXOSC9Q06265 439 aaKnown RBP20.01■□□□□ 0.79
IRF3-226ENST00000600453 LDHDQ86WU2 507 aa20.01■□□□□ 0.79
IRF3-226ENST00000600453 ZNRF3Q9ULT6 936 aa20.01■□□□□ 0.79
IRF3-226ENST00000600453 EPHX2P34913 555 aa20■□□□□ 0.79
IRF3-226ENST00000600453 FLIIQ13045 1269 aa20■□□□□ 0.79
IRF3-226ENST00000600453 AOC3Q16853 763 aa20■□□□□ 0.79
IRF3-226ENST00000600453 CELF1Q92879 486 aaKnown RBP20■□□□□ 0.79
IRF3-226ENST00000600453 GJA3Q9Y6H8 435 aa20■□□□□ 0.79
IRF3-226ENST00000600453 CDHR2Q9BYE9 1310 aa20■□□□□ 0.79
IRF3-226ENST00000600453 DDX60Q8IY21 1712 aaKnown RBP19.99■□□□□ 0.79
IRF3-226ENST00000600453 KIAA2012Q0VF49 1180 aa19.99■□□□□ 0.79
IRF3-226ENST00000600453 FKBP5Q13451 457 aaPredicted RBP19.99■□□□□ 0.79
IRF3-226ENST00000600453 DNAJC5GQ8N7S2 189 aa19.99■□□□□ 0.79
IRF3-226ENST00000600453 NSFL1CQ9UNZ2 370 aaKnown RBP19.99■□□□□ 0.79
IRF3-226ENST00000600453 G2E3Q7L622 706 aa19.98■□□□□ 0.79
IRF3-226ENST00000600453 EYA3Q99504 573 aa19.98■□□□□ 0.79
IRF3-226ENST00000600453 CLEC11AQ9Y240 323 aa19.98■□□□□ 0.79
IRF3-226ENST00000600453 IGKV5-2P06315 115 aa19.97■□□□□ 0.79
IRF3-226ENST00000600453 TNIP1Q15025 636 aa19.97■□□□□ 0.79
IRF3-226ENST00000600453 WASHC4Q2M389 1173 aa19.97■□□□□ 0.79
IRF3-226ENST00000600453 EAPPQ56P03 285 aaPredicted RBP19.97■□□□□ 0.79
IRF3-226ENST00000600453 DNAAF4Q8WXU2 420 aa19.97■□□□□ 0.79
IRF3-226ENST00000600453 CEP350Q5VT06 3117 aa19.96■□□□□ 0.79
IRF3-226ENST00000600453 NEURL1BA8MQ27 555 aa19.96■□□□□ 0.79
IRF3-226ENST00000600453 TAF1P21675 1872 aa19.95■□□□□ 0.78
IRF3-226ENST00000600453 C6orf229H3BNL8 230 aa19.95■□□□□ 0.78
IRF3-226ENST00000600453 H7C1W4 665 aa19.95■□□□□ 0.78
IRF3-226ENST00000600453 CIAPIN1Q6FI81 312 aa19.95■□□□□ 0.78
IRF3-226ENST00000600453 ANKRD18AQ8IVF6 992 aa19.95■□□□□ 0.78
IRF3-226ENST00000600453 LINS1Q8NG48 757 aa19.95■□□□□ 0.78
IRF3-226ENST00000600453 CDC5LQ99459 802 aaKnown RBP19.95■□□□□ 0.78
IRF3-226ENST00000600453 SPINK5Q9NQ38 1064 aaPredicted RBP19.95■□□□□ 0.78
IRF3-226ENST00000600453 CXCL9Q07325 125 aa19.94■□□□□ 0.78
IRF3-226ENST00000600453 GCKRQ14397 625 aa19.94■□□□□ 0.78
IRF3-226ENST00000600453 CWF19L2Q2TBE0 894 aaKnown RBP19.94■□□□□ 0.78
IRF3-226ENST00000600453 JARID2Q92833 1246 aaPredicted RBP19.94■□□□□ 0.78
IRF3-226ENST00000600453 KLRG1Q96E93 195 aa19.94■□□□□ 0.78
IRF3-226ENST00000600453 SEC31BQ9NQW1 1179 aa19.94■□□□□ 0.78
IRF3-226ENST00000600453 PODXL2Q9NZ53 605 aa19.94■□□□□ 0.78
IRF3-226ENST00000600453 CCER2I3L3R5 266 aa19.93■□□□□ 0.78
IRF3-226ENST00000600453 POTEIP0CG38 1075 aa19.93■□□□□ 0.78
IRF3-226ENST00000600453 POTEJP0CG39 1038 aa19.93■□□□□ 0.78
IRF3-226ENST00000600453 CTSWP56202 376 aa19.93■□□□□ 0.78
IRF3-226ENST00000600453 GPSM2P81274 684 aa19.93■□□□□ 0.78
IRF3-226ENST00000600453 USP50Q70EL3 339 aaPredicted RBP19.93■□□□□ 0.78
IRF3-226ENST00000600453 SLC51AQ86UW1 340 aa19.93■□□□□ 0.78
IRF3-226ENST00000600453 ZC3H12CQ9C0D7 883 aaKnown RBP19.93■□□□□ 0.78
IRF3-226ENST00000600453 ANKIB1Q9P2G1 1089 aa19.93■□□□□ 0.78
IRF3-226ENST00000600453 TTLL11Q8NHH1 800 aa19.92■□□□□ 0.78
IRF3-226ENST00000600453 BCL2L13Q9BXK5 485 aa19.92■□□□□ 0.78
IRF3-226ENST00000600453 ZNF521Q96K83 1311 aa19.92■□□□□ 0.78
IRF3-226ENST00000600453 COL4A5P29400 1685 aa19.91■□□□□ 0.78
IRF3-226ENST00000600453 E9PSI1 815 aa19.91■□□□□ 0.78
IRF3-226ENST00000600453 G3V3G9 751 aa19.91■□□□□ 0.78
IRF3-226ENST00000600453 SCNN1DP51172 638 aa19.91■□□□□ 0.78
IRF3-226ENST00000600453 DCAF8Q5TAQ9 597 aa19.91■□□□□ 0.78
IRF3-226ENST00000600453 UBE3BQ7Z3V4 1068 aa19.91■□□□□ 0.78
IRF3-226ENST00000600453 TBC1D16Q8TBP0 767 aa19.91■□□□□ 0.78
IRF3-226ENST00000600453 PLA2G12BQ9BX93 195 aa19.91■□□□□ 0.78
IRF3-226ENST00000600453 CREBZFQ9NS37 354 aa19.91■□□□□ 0.78
IRF3-226ENST00000600453 POLLQ9UGP5 575 aa19.91■□□□□ 0.78
IRF3-226ENST00000600453 EPS15P42566 896 aa19.9■□□□□ 0.78
IRF3-226ENST00000600453 HTRA3P83110 453 aa19.9■□□□□ 0.78
IRF3-226ENST00000600453 CNTROBQ8N137 903 aa19.9■□□□□ 0.78
IRF3-226ENST00000600453 CCDC85AQ96PX6 553 aaPredicted RBP19.9■□□□□ 0.78
IRF3-226ENST00000600453 ADARB2Q9NS39 739 aaKnown RBP19.9■□□□□ 0.78
IRF3-226ENST00000600453 BSDC1Q9NW68 430 aaPredicted RBP19.9■□□□□ 0.78
IRF3-226ENST00000600453 GPRC5DQ9NZD1 345 aa19.9■□□□□ 0.78
IRF3-226ENST00000600453 GGA1Q9UJY5 639 aa19.9■□□□□ 0.78
IRF3-226ENST00000600453 LRRC37AA6NMS7 1700 aa19.9■□□□□ 0.78
IRF3-226ENST00000600453 RIMBP2O15034 1052 aa19.89■□□□□ 0.77
IRF3-226ENST00000600453 RAD17O75943 681 aa19.89■□□□□ 0.77
IRF3-226ENST00000600453 RTL9Q8NET4 1388 aa19.89■□□□□ 0.77
IRF3-226ENST00000600453 XDHP47989 1333 aa19.88■□□□□ 0.77
IRF3-226ENST00000600453 PASKQ96RG2 1323 aa19.88■□□□□ 0.77
IRF3-226ENST00000600453 ITGBL1O95965 494 aaPredicted RBP19.88■□□□□ 0.77
IRF3-226ENST00000600453 ATP2B4P23634 1241 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms