RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 PIM2Q9P1W9 311 aa14.94□□□□□ -0.02
FARP1-230ENST00000600380 TAF1P21675 1872 aa14.94□□□□□ -0.02
FARP1-230ENST00000600380 BRCA1P38398 1863 aaKnown RBP14.93□□□□□ -0.02
FARP1-230ENST00000600380 CSF1RP07333 972 aa14.93□□□□□ -0.02
FARP1-230ENST00000600380 FTSJ3Q8IY81 847 aaKnown RBP14.93□□□□□ -0.02
FARP1-230ENST00000600380 C7orf43Q8WVR3 580 aa14.93□□□□□ -0.02
FARP1-230ENST00000600380 GREM2Q9H772 168 aa14.93□□□□□ -0.02
FARP1-230ENST00000600380 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
FARP1-230ENST00000600380 COG6Q9Y2V7 657 aa14.93□□□□□ -0.02
FARP1-230ENST00000600380 SLX4Q8IY92 1834 aa14.93□□□□□ -0.02
FARP1-230ENST00000600380 DLEC1Q9Y238 1755 aa14.93□□□□□ -0.02
FARP1-230ENST00000600380 ZBTB7BO15156 539 aaPredicted RBP14.92□□□□□ -0.02
FARP1-230ENST00000600380 DALRD3Q5D0E6 543 aaKnown RBP14.92□□□□□ -0.02
FARP1-230ENST00000600380 PRPF40BQ6NWY9 871 aaKnown RBP14.92□□□□□ -0.02
FARP1-230ENST00000600380 LMBR1LQ6UX01 489 aa14.92□□□□□ -0.02
FARP1-230ENST00000600380 PELP1Q8IZL8 1130 aaKnown RBP14.92□□□□□ -0.02
FARP1-230ENST00000600380 TTLL6Q8N841 843 aa14.92□□□□□ -0.02
FARP1-230ENST00000600380 RPGRQ92834 1020 aaKnown RBP14.92□□□□□ -0.02
FARP1-230ENST00000600380 CELF1Q92879 486 aaKnown RBP14.92□□□□□ -0.02
FARP1-230ENST00000600380 CRAMP1Q96RY5 1269 aa14.92□□□□□ -0.02
FARP1-230ENST00000600380 BICC1Q9H694 974 aaKnown RBP14.92□□□□□ -0.02
FARP1-230ENST00000600380 PDZRN3Q9UPQ7 1066 aa14.92□□□□□ -0.02
FARP1-230ENST00000600380 BCS1LQ9Y276 419 aa14.92□□□□□ -0.02
FARP1-230ENST00000600380 SUPT16HQ9Y5B9 1047 aaKnown RBP14.92□□□□□ -0.02
FARP1-230ENST00000600380 FAM161AQ3B820 660 aa14.91□□□□□ -0.02
FARP1-230ENST00000600380 ITPRIPQ8IWB1 547 aa14.91□□□□□ -0.02
FARP1-230ENST00000600380 RBM17Q96I25 401 aaKnown RBP14.91□□□□□ -0.02
FARP1-230ENST00000600380 LRRFIP2Q9Y608 721 aaKnown RBP14.91□□□□□ -0.02
FARP1-230ENST00000600380 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
FARP1-230ENST00000600380 PDE3AQ14432 1141 aa14.9□□□□□ -0.02
FARP1-230ENST00000600380 CNKSR1Q969H4 720 aa14.9□□□□□ -0.02
FARP1-230ENST00000600380 UTRNP46939 3433 aa14.89□□□□□ -0.03
FARP1-230ENST00000600380 C21orf2O43822 256 aa14.89□□□□□ -0.03
FARP1-230ENST00000600380 GRAPQ13588 217 aa14.89□□□□□ -0.03
FARP1-230ENST00000600380 MVPQ14764 893 aaKnown RBP14.89□□□□□ -0.03
FARP1-230ENST00000600380 GPR162Q16538 588 aa14.89□□□□□ -0.03
FARP1-230ENST00000600380 RABL6Q3YEC7 729 aaPredicted RBP14.89□□□□□ -0.03
FARP1-230ENST00000600380 CCDC152Q4G0S7 254 aa14.89□□□□□ -0.03
FARP1-230ENST00000600380 DDX46Q7L014 1031 aaKnown RBP14.89□□□□□ -0.03
FARP1-230ENST00000600380 GRAPLQ8TC17 118 aaPredicted RBP14.89□□□□□ -0.03
FARP1-230ENST00000600380 C1orf115Q9H7X2 142 aa14.89□□□□□ -0.03
FARP1-230ENST00000600380 RTL9Q8NET4 1388 aa14.88□□□□□ -0.03
FARP1-230ENST00000600380 ZNF594Q96JF6 807 aaPredicted RBP14.88□□□□□ -0.03
FARP1-230ENST00000600380 PPEF1O14829 653 aaPredicted RBP14.87□□□□□ -0.03
FARP1-230ENST00000600380 GNAI3P08754 354 aa14.87□□□□□ -0.03
FARP1-230ENST00000600380 HSP90B1P14625 803 aaKnown RBP14.87□□□□□ -0.03
FARP1-230ENST00000600380 ITGA6P23229 1130 aa14.87□□□□□ -0.03
FARP1-230ENST00000600380 ALDH1B1P30837 517 aa14.87□□□□□ -0.03
FARP1-230ENST00000600380 RFX5P48382 616 aaPredicted RBP14.87□□□□□ -0.03
FARP1-230ENST00000600380 PRELPP51888 382 aa14.87□□□□□ -0.03
FARP1-230ENST00000600380 RPS8P62241 208 aaKnown RBP14.87□□□□□ -0.03
FARP1-230ENST00000600380 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.87□□□□□ -0.03
FARP1-230ENST00000600380 MYH3P11055 1940 aa14.87□□□□□ -0.03
FARP1-230ENST00000600380 CACNA1SQ13698 1873 aa14.86□□□□□ -0.03
FARP1-230ENST00000600380 SNED1Q8TER0 1413 aa14.86□□□□□ -0.03
FARP1-230ENST00000600380 WTIPA6NIX2 430 aaPredicted RBP14.86□□□□□ -0.03
FARP1-230ENST00000600380 BBOX1O75936 387 aa14.86□□□□□ -0.03
FARP1-230ENST00000600380 MS4A1P11836 297 aa14.86□□□□□ -0.03
FARP1-230ENST00000600380 KLHDC4Q8TBB5 520 aa14.86□□□□□ -0.03
FARP1-230ENST00000600380 CRBNQ96SW2 442 aa14.86□□□□□ -0.03
FARP1-230ENST00000600380 ZBTB40Q9NUA8 1239 aa14.86□□□□□ -0.03
FARP1-230ENST00000600380 CHMP3Q9Y3E7 222 aa14.86□□□□□ -0.03
FARP1-230ENST00000600380 NFKBIEO00221 500 aa14.85□□□□□ -0.03
FARP1-230ENST00000600380 GNAI2P04899 355 aa14.85□□□□□ -0.03
FARP1-230ENST00000600380 PUS3Q9BZE2 481 aaKnown RBP14.85□□□□□ -0.03
FARP1-230ENST00000600380 ATP6V0A2Q9Y487 856 aa14.85□□□□□ -0.03
FARP1-230ENST00000600380 RASSF7Q02833 373 aa14.84□□□□□ -0.03
FARP1-230ENST00000600380 ARHGAP27Q6ZUM4 889 aa14.84□□□□□ -0.03
FARP1-230ENST00000600380 ARFGEF1Q9Y6D6 1849 aa14.84□□□□□ -0.03
FARP1-230ENST00000600380 PNMA6EA0A0J9YXQ4 647 aa14.83□□□□□ -0.04
FARP1-230ENST00000600380 ANKRD18BA2A2Z9 1011 aa14.83□□□□□ -0.04
FARP1-230ENST00000600380 IRX6P78412 446 aaPredicted RBP14.83□□□□□ -0.04
FARP1-230ENST00000600380 GPSM2P81274 684 aa14.83□□□□□ -0.04
FARP1-230ENST00000600380 IFIT5Q13325 482 aaKnown RBP14.83□□□□□ -0.04
FARP1-230ENST00000600380 ANKRD18AQ8IVF6 992 aa14.83□□□□□ -0.04
FARP1-230ENST00000600380 SP8Q8IXZ3 490 aa14.83□□□□□ -0.04
FARP1-230ENST00000600380 DDX19BQ9UMR2 479 aa14.83□□□□□ -0.04
FARP1-230ENST00000600380 MTX1Q13505 466 aa14.82□□□□□ -0.04
FARP1-230ENST00000600380 CCDC57Q2TAC2 916 aa14.82□□□□□ -0.04
FARP1-230ENST00000600380 SIRT2Q8IXJ6 389 aa14.82□□□□□ -0.04
FARP1-230ENST00000600380 CDC5LQ99459 802 aaKnown RBP14.82□□□□□ -0.04
FARP1-230ENST00000600380 BSDC1Q9NW68 430 aaPredicted RBP14.82□□□□□ -0.04
FARP1-230ENST00000600380 MINPP1Q9UNW1 487 aa14.82□□□□□ -0.04
FARP1-230ENST00000600380 PA2G4Q9UQ80 394 aaKnown RBP14.82□□□□□ -0.04
FARP1-230ENST00000600380 SNAP23O00161 211 aa14.81□□□□□ -0.04
FARP1-230ENST00000600380 ATP8B2P98198 1209 aa14.81□□□□□ -0.04
FARP1-230ENST00000600380 PTPN12Q05209 780 aaKnown RBP14.81□□□□□ -0.04
FARP1-230ENST00000600380 LRRC24Q50LG9 513 aa14.81□□□□□ -0.04
FARP1-230ENST00000600380 CCDC93Q567U6 631 aa14.81□□□□□ -0.04
FARP1-230ENST00000600380 GPR101Q96P66 508 aaPredicted RBP14.81□□□□□ -0.04
FARP1-230ENST00000600380 SPEF2Q9C093 1822 aa14.8□□□□□ -0.04
FARP1-230ENST00000600380 SRGAP3O43295 1099 aa14.8□□□□□ -0.04
FARP1-230ENST00000600380 GRIN3BO60391 1043 aa14.8□□□□□ -0.04
FARP1-230ENST00000600380 POLA2Q14181 598 aa14.8□□□□□ -0.04
FARP1-230ENST00000600380 CEP85Q6P2H3 762 aa14.8□□□□□ -0.04
FARP1-230ENST00000600380 HELBQ8NG08 1087 aaPredicted RBP14.8□□□□□ -0.04
FARP1-230ENST00000600380 EXOC6Q8TAG9 804 aa14.8□□□□□ -0.04
FARP1-230ENST00000600380 POLLQ9UGP5 575 aa14.8□□□□□ -0.04
FARP1-230ENST00000600380 RIPOR2Q9Y4F9 1068 aa14.8□□□□□ -0.04
FARP1-230ENST00000600380 LRRC37AA6NMS7 1700 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms