RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 UBE3BQ7Z3V4 1068 aa29.03■■■□□ 2.24
IRF3-220ENST00000598108 SP8Q8IXZ3 490 aa29.03■■■□□ 2.24
IRF3-220ENST00000598108 CCDC85AQ96PX6 553 aaPredicted RBP29.03■■■□□ 2.24
IRF3-220ENST00000598108 PSMD1Q99460 953 aa29.03■■■□□ 2.24
IRF3-220ENST00000598108 SEC31BQ9NQW1 1179 aa29.03■■■□□ 2.24
IRF3-220ENST00000598108 DDX60Q8IY21 1712 aaKnown RBP29.03■■■□□ 2.24
IRF3-220ENST00000598108 ZC3H4Q9UPT8 1303 aaKnown RBP29.02■■■□□ 2.24
IRF3-220ENST00000598108 CASP7P55210 303 aa29.02■■■□□ 2.24
IRF3-220ENST00000598108 LAMB2P55268 1798 aa29.01■■■□□ 2.23
IRF3-220ENST00000598108 NMRK2Q9NPI5 230 aa29.01■■■□□ 2.23
IRF3-220ENST00000598108 ALDH1L2Q3SY69 923 aa29■■■□□ 2.23
IRF3-220ENST00000598108 CCDC152Q4G0S7 254 aa29■■■□□ 2.23
IRF3-220ENST00000598108 GRIPAP1Q4V328 841 aa29■■■□□ 2.23
IRF3-220ENST00000598108 SLC4A10Q6U841 1118 aa29■■■□□ 2.23
IRF3-220ENST00000598108 KIF3CO14782 793 aa28.99■■■□□ 2.23
IRF3-220ENST00000598108 CT47B1P0C2W7 299 aaPredicted RBP28.99■■■□□ 2.23
IRF3-220ENST00000598108 IARSP41252 1262 aaKnown RBP28.99■■■□□ 2.23
IRF3-220ENST00000598108 CTSWP56202 376 aa28.99■■■□□ 2.23
IRF3-220ENST00000598108 CACNA1FO60840 1977 aa28.99■■■□□ 2.23
IRF3-220ENST00000598108 GLTPD2A6NH11 291 aa28.98■■■□□ 2.23
IRF3-220ENST00000598108 RPS8P62241 208 aaKnown RBP28.98■■■□□ 2.23
IRF3-220ENST00000598108 TTLL11Q8NHH1 800 aa28.98■■■□□ 2.23
IRF3-220ENST00000598108 TMX4Q9H1E5 349 aaPredicted RBP28.98■■■□□ 2.23
IRF3-220ENST00000598108 SMC4Q9NTJ3 1288 aa28.98■■■□□ 2.23
IRF3-220ENST00000598108 COL4A1P02462 1669 aa28.98■■■□□ 2.23
IRF3-220ENST00000598108 KDM2BQ8NHM5 1336 aa28.96■■■□□ 2.23
IRF3-220ENST00000598108 TMC4Q7Z404 712 aa28.96■■■□□ 2.23
IRF3-220ENST00000598108 PTPRCP08575 1304 aa28.95■■■□□ 2.23
IRF3-220ENST00000598108 MPNDQ8N594 471 aa28.95■■■□□ 2.22
IRF3-220ENST00000598108 PLA2G12BQ9BX93 195 aa28.95■■■□□ 2.22
IRF3-220ENST00000598108 RTFDC1Q9BY42 306 aaPredicted RBP28.95■■■□□ 2.22
IRF3-220ENST00000598108 GREM2Q9H772 168 aa28.95■■■□□ 2.22
IRF3-220ENST00000598108 RRAGCQ9HB90 399 aa28.95■■■□□ 2.22
IRF3-220ENST00000598108 DPP8Q6V1X1 898 aaPredicted RBP28.94■■■□□ 2.22
IRF3-220ENST00000598108 SRCIN1Q9C0H9 1055 aa28.94■■■□□ 2.22
IRF3-220ENST00000598108 TAF1P21675 1872 aa28.93■■■□□ 2.22
IRF3-220ENST00000598108 ALDH1L1O75891 902 aa28.93■■■□□ 2.22
IRF3-220ENST00000598108 RARSP54136 660 aaKnown RBP28.93■■■□□ 2.22
IRF3-220ENST00000598108 C1QTNF8P60827 252 aa28.92■■■□□ 2.22
IRF3-220ENST00000598108 DPY19L2Q6NUT2 758 aa28.92■■■□□ 2.22
IRF3-220ENST00000598108 CCDC88AQ3V6T2 1871 aa28.91■■■□□ 2.22
IRF3-220ENST00000598108 FZD9O00144 591 aa28.91■■■□□ 2.22
IRF3-220ENST00000598108 GRM8O00222 908 aa28.91■■■□□ 2.22
IRF3-220ENST00000598108 DDNO94850 711 aaPredicted RBP28.91■■■□□ 2.22
IRF3-220ENST00000598108 CSF1RP07333 972 aa28.91■■■□□ 2.22
IRF3-220ENST00000598108 GPSM2P81274 684 aa28.91■■■□□ 2.22
IRF3-220ENST00000598108 NOB1Q9ULX3 412 aaKnown RBP28.91■■■□□ 2.22
IRF3-220ENST00000598108 FOXO4P98177 505 aa28.9■■■□□ 2.22
IRF3-220ENST00000598108 AOC3Q16853 763 aa28.9■■■□□ 2.22
IRF3-220ENST00000598108 LARGE2Q8N3Y3 721 aa28.9■■■□□ 2.22
IRF3-220ENST00000598108 NSFL1CQ9UNZ2 370 aaKnown RBP28.9■■■□□ 2.22
IRF3-220ENST00000598108 ZNF541Q9H0D2 1346 aa28.9■■■□□ 2.22
IRF3-220ENST00000598108 COL4A5P29400 1685 aa28.89■■■□□ 2.22
IRF3-220ENST00000598108 POTECB2RU33 542 aa28.89■■■□□ 2.22
IRF3-220ENST00000598108 PPIP5K2O43314 1243 aa28.89■■■□□ 2.22
IRF3-220ENST00000598108 BRPF1P55201 1214 aaPredicted RBP28.89■■■□□ 2.22
IRF3-220ENST00000598108 ANKRD18AQ8IVF6 992 aa28.89■■■□□ 2.22
IRF3-220ENST00000598108 SUPT20HQ8NEM7 779 aa28.89■■■□□ 2.22
IRF3-220ENST00000598108 ZBED9Q6R2W3 1325 aa28.89■■■□□ 2.21
IRF3-220ENST00000598108 EPHA10Q5JZY3 1008 aa28.88■■■□□ 2.21
IRF3-220ENST00000598108 JDP2Q8WYK2 163 aa28.88■■■□□ 2.21
IRF3-220ENST00000598108 C9orf78Q9NZ63 289 aaPredicted RBP28.88■■■□□ 2.21
IRF3-220ENST00000598108 POLLQ9UGP5 575 aa28.88■■■□□ 2.21
IRF3-220ENST00000598108 RTL9Q8NET4 1388 aa28.88■■■□□ 2.21
IRF3-220ENST00000598108 FAM161AQ3B820 660 aa28.87■■■□□ 2.21
IRF3-220ENST00000598108 CDC5LQ99459 802 aaKnown RBP28.87■■■□□ 2.21
IRF3-220ENST00000598108 VPS33BQ9H267 617 aa28.87■■■□□ 2.21
IRF3-220ENST00000598108 TIAM2Q8IVF5 1701 aa28.86■■■□□ 2.21
IRF3-220ENST00000598108 NBPF7P0C2Y1 421 aaPredicted RBP28.85■■■□□ 2.21
IRF3-220ENST00000598108 VEGFAP15692 232 aaPredicted RBP28.85■■■□□ 2.21
IRF3-220ENST00000598108 ITGA6P23229 1130 aa28.85■■■□□ 2.21
IRF3-220ENST00000598108 DICER1Q9UPY3 1922 aaKnown RBP28.84■■■□□ 2.21
IRF3-220ENST00000598108 KIAA2012Q0VF49 1180 aa28.84■■■□□ 2.21
IRF3-220ENST00000598108 BCAR3O75815 825 aa28.83■■■□□ 2.21
IRF3-220ENST00000598108 LMBR1LQ6UX01 489 aa28.83■■■□□ 2.21
IRF3-220ENST00000598108 NIM1KQ8IY84 436 aa28.83■■■□□ 2.21
IRF3-220ENST00000598108 TBC1D16Q8TBP0 767 aa28.83■■■□□ 2.21
IRF3-220ENST00000598108 KAZALD1Q96I82 304 aa28.83■■■□□ 2.21
IRF3-220ENST00000598108 SUCLG2Q96I99 432 aa28.83■■■□□ 2.21
IRF3-220ENST00000598108 GPR101Q96P66 508 aaPredicted RBP28.83■■■□□ 2.21
IRF3-220ENST00000598108 BSDC1Q9NW68 430 aaPredicted RBP28.83■■■□□ 2.21
IRF3-220ENST00000598108 PODXL2Q9NZ53 605 aa28.83■■■□□ 2.21
IRF3-220ENST00000598108 UTYO14607 1347 aa28.83■■■□□ 2.21
IRF3-220ENST00000598108 C6orf229H3BNL8 230 aa28.82■■■□□ 2.2
IRF3-220ENST00000598108 TOMM70O94826 608 aa28.82■■■□□ 2.2
IRF3-220ENST00000598108 DUOX1Q9NRD9 1551 aa28.82■■■□□ 2.2
IRF3-220ENST00000598108 USP44Q9H0E7 712 aa28.81■■■□□ 2.2
IRF3-220ENST00000598108 ANKIB1Q9P2G1 1089 aa28.81■■■□□ 2.2
IRF3-220ENST00000598108 MINPP1Q9UNW1 487 aa28.81■■■□□ 2.2
IRF3-220ENST00000598108 WTIPA6NIX2 430 aaPredicted RBP28.8■■■□□ 2.2
IRF3-220ENST00000598108 EIF6P56537 245 aaKnown RBP28.8■■■□□ 2.2
IRF3-220ENST00000598108 WASHC4Q2M389 1173 aa28.8■■■□□ 2.2
IRF3-220ENST00000598108 API5Q9BZZ5 524 aaKnown RBP28.8■■■□□ 2.2
IRF3-220ENST00000598108 ZNRF3Q9ULT6 936 aa28.8■■■□□ 2.2
IRF3-220ENST00000598108 LRRC37AA6NMS7 1700 aa28.8■■■□□ 2.2
IRF3-220ENST00000598108 RIMBP2O15034 1052 aa28.79■■■□□ 2.2
IRF3-220ENST00000598108 L3MBTL3Q96JM7 780 aaPredicted RBP28.79■■■□□ 2.2
IRF3-220ENST00000598108 CHMP3Q9Y3E7 222 aa28.79■■■□□ 2.2
IRF3-220ENST00000598108 ANKRD18BA2A2Z9 1011 aa28.78■■■□□ 2.2
IRF3-220ENST00000598108 UFL1O94874 794 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms