RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 TAF1DQ9H5J8 278 aaPredicted RBP23.07■■□□□ 1.28
CHMP2A-203ENST00000597209 PCCAP05165 728 aaPredicted RBP23.06■■□□□ 1.28
CHMP2A-203ENST00000597209 CHADLQ6NUI6 762 aa23.06■■□□□ 1.28
CHMP2A-203ENST00000597209 KSR2Q6VAB6 950 aa23.06■■□□□ 1.28
CHMP2A-203ENST00000597209 MPNDQ8N594 471 aa23.06■■□□□ 1.28
CHMP2A-203ENST00000597209 ZNF428Q96B54 188 aa23.06■■□□□ 1.28
CHMP2A-203ENST00000597209 HACL1Q9UJ83 578 aa23.06■■□□□ 1.28
CHMP2A-203ENST00000597209 DPP8Q6V1X1 898 aaPredicted RBP23.05■■□□□ 1.28
CHMP2A-203ENST00000597209 CWC25Q9NXE8 425 aaPredicted RBP23.05■■□□□ 1.28
CHMP2A-203ENST00000597209 FANCIQ9NVI1 1328 aa23.05■■□□□ 1.28
CHMP2A-203ENST00000597209 PPIP5K2O43314 1243 aa23.04■■□□□ 1.28
CHMP2A-203ENST00000597209 LDHDQ86WU2 507 aa23.04■■□□□ 1.28
CHMP2A-203ENST00000597209 NIM1KQ8IY84 436 aa23.04■■□□□ 1.28
CHMP2A-203ENST00000597209 MAP3K2Q9Y2U5 619 aa23.04■■□□□ 1.28
CHMP2A-203ENST00000597209 LRRC37AA6NMS7 1700 aa23.04■■□□□ 1.28
CHMP2A-203ENST00000597209 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
CHMP2A-203ENST00000597209 TAF1P21675 1872 aa23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 PI4KAP2A4QPH2 592 aa23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 SLC4A2P04920 1241 aa23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 POTEIP0CG38 1075 aa23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 POTEJP0CG39 1038 aa23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 EPHX2P34913 555 aa23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 AOC3Q16853 763 aa23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 FAM9BQ8IZU0 186 aa23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 PI4KAP1Q8N8J0 262 aa23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 CELF1Q92879 486 aaKnown RBP23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 SALL2Q9Y467 1007 aaPredicted RBP23.02■■□□□ 1.28
CHMP2A-203ENST00000597209 HTRA3P83110 453 aa23.01■■□□□ 1.27
CHMP2A-203ENST00000597209 KIAA2012Q0VF49 1180 aa23.01■■□□□ 1.27
CHMP2A-203ENST00000597209 PNMA8AQ86V59 439 aaPredicted RBP23.01■■□□□ 1.27
CHMP2A-203ENST00000597209 KLRG1Q96E93 195 aa23.01■■□□□ 1.27
CHMP2A-203ENST00000597209 PDE8AO60658 829 aa23■■□□□ 1.27
CHMP2A-203ENST00000597209 VAMP4O75379 141 aa23■■□□□ 1.27
CHMP2A-203ENST00000597209 IGKV5-2P06315 115 aa23■■□□□ 1.27
CHMP2A-203ENST00000597209 NEXNQ0ZGT2 675 aa23■■□□□ 1.27
CHMP2A-203ENST00000597209 ZNRF3Q9ULT6 936 aa23■■□□□ 1.27
CHMP2A-203ENST00000597209 GJA3Q9Y6H8 435 aa23■■□□□ 1.27
CHMP2A-203ENST00000597209 CDHR2Q9BYE9 1310 aa23■■□□□ 1.27
CHMP2A-203ENST00000597209 ADAMTSL1Q8N6G6 1762 aa22.99■■□□□ 1.27
CHMP2A-203ENST00000597209 RPS8P62241 208 aaKnown RBP22.99■■□□□ 1.27
CHMP2A-203ENST00000597209 G2E3Q7L622 706 aa22.99■■□□□ 1.27
CHMP2A-203ENST00000597209 CACNA1FO60840 1977 aa22.99■■□□□ 1.27
CHMP2A-203ENST00000597209 DUOX1Q9NRD9 1551 aa22.98■■□□□ 1.27
CHMP2A-203ENST00000597209 EXOSC9Q06265 439 aaKnown RBP22.98■■□□□ 1.27
CHMP2A-203ENST00000597209 CCDC152Q4G0S7 254 aa22.98■■□□□ 1.27
CHMP2A-203ENST00000597209 LMOD1P29536 600 aaPredicted RBP22.97■■□□□ 1.27
CHMP2A-203ENST00000597209 FLIIQ13045 1269 aa22.97■■□□□ 1.27
CHMP2A-203ENST00000597209 EAPPQ56P03 285 aaPredicted RBP22.97■■□□□ 1.27
CHMP2A-203ENST00000597209 JMYQ8N9B5 988 aa22.97■■□□□ 1.27
CHMP2A-203ENST00000597209 MYH16Q9H6N6 1097 aa22.97■■□□□ 1.27
CHMP2A-203ENST00000597209 SCNN1DP51172 638 aa22.96■■□□□ 1.27
CHMP2A-203ENST00000597209 CXCL9Q07325 125 aa22.96■■□□□ 1.27
CHMP2A-203ENST00000597209 SPINK5Q9NQ38 1064 aaPredicted RBP22.96■■□□□ 1.27
CHMP2A-203ENST00000597209 NSFL1CQ9UNZ2 370 aaKnown RBP22.96■■□□□ 1.27
CHMP2A-203ENST00000597209 COL4A1P02462 1669 aa22.96■■□□□ 1.27
CHMP2A-203ENST00000597209 NEURL1BA8MQ27 555 aa22.95■■□□□ 1.26
CHMP2A-203ENST00000597209 LTBP1Q14766 1721 aa22.95■■□□□ 1.26
CHMP2A-203ENST00000597209 PASKQ96RG2 1323 aa22.95■■□□□ 1.26
CHMP2A-203ENST00000597209 SEC31BQ9NQW1 1179 aa22.95■■□□□ 1.26
CHMP2A-203ENST00000597209 ITGBL1O95965 494 aaPredicted RBP22.94■■□□□ 1.26
CHMP2A-203ENST00000597209 JARID2Q92833 1246 aaPredicted RBP22.94■■□□□ 1.26
CHMP2A-203ENST00000597209 CREBZFQ9NS37 354 aa22.94■■□□□ 1.26
CHMP2A-203ENST00000597209 PODXL2Q9NZ53 605 aa22.94■■□□□ 1.26
CHMP2A-203ENST00000597209 CLEC11AQ9Y240 323 aa22.94■■□□□ 1.26
CHMP2A-203ENST00000597209 ZNF521Q96K83 1311 aa22.93■■□□□ 1.26
CHMP2A-203ENST00000597209 H7C1W4 665 aa22.93■■□□□ 1.26
CHMP2A-203ENST00000597209 EPS15P42566 896 aa22.93■■□□□ 1.26
CHMP2A-203ENST00000597209 GPSM2P81274 684 aa22.93■■□□□ 1.26
CHMP2A-203ENST00000597209 TNIP1Q15025 636 aa22.93■■□□□ 1.26
CHMP2A-203ENST00000597209 WASHC4Q2M389 1173 aa22.93■■□□□ 1.26
CHMP2A-203ENST00000597209 CWF19L2Q2TBE0 894 aaKnown RBP22.93■■□□□ 1.26
CHMP2A-203ENST00000597209 CIAPIN1Q6FI81 312 aa22.93■■□□□ 1.26
CHMP2A-203ENST00000597209 USP50Q70EL3 339 aaPredicted RBP22.93■■□□□ 1.26
CHMP2A-203ENST00000597209 FKBP5Q13451 457 aaPredicted RBP22.92■■□□□ 1.26
CHMP2A-203ENST00000597209 DNAAF4Q8WXU2 420 aa22.92■■□□□ 1.26
CHMP2A-203ENST00000597209 EYA3Q99504 573 aa22.92■■□□□ 1.26
CHMP2A-203ENST00000597209 POLLQ9UGP5 575 aa22.92■■□□□ 1.26
CHMP2A-203ENST00000597209 CTSWP56202 376 aa22.91■■□□□ 1.26
CHMP2A-203ENST00000597209 GPRC5DQ9NZD1 345 aa22.91■■□□□ 1.26
CHMP2A-203ENST00000597209 RTL9Q8NET4 1388 aa22.9■■□□□ 1.26
CHMP2A-203ENST00000597209 C6orf229H3BNL8 230 aa22.9■■□□□ 1.26
CHMP2A-203ENST00000597209 GCKRQ14397 625 aa22.9■■□□□ 1.26
CHMP2A-203ENST00000597209 CNTROBQ8N137 903 aa22.9■■□□□ 1.26
CHMP2A-203ENST00000597209 LINS1Q8NG48 757 aa22.9■■□□□ 1.26
CHMP2A-203ENST00000597209 TTLL11Q8NHH1 800 aa22.9■■□□□ 1.26
CHMP2A-203ENST00000597209 TBC1D16Q8TBP0 767 aa22.9■■□□□ 1.26
CHMP2A-203ENST00000597209 ADARB2Q9NS39 739 aaKnown RBP22.9■■□□□ 1.26
CHMP2A-203ENST00000597209 YDJCA8MPS7 323 aa22.89■■□□□ 1.25
CHMP2A-203ENST00000597209 ANKRD18AQ8IVF6 992 aa22.89■■□□□ 1.25
CHMP2A-203ENST00000597209 PLA2G12BQ9BX93 195 aa22.89■■□□□ 1.25
CHMP2A-203ENST00000597209 MYH3P11055 1940 aa22.88■■□□□ 1.25
CHMP2A-203ENST00000597209 RAD17O75943 681 aa22.88■■□□□ 1.25
CHMP2A-203ENST00000597209 GMPSP49915 693 aaPredicted RBP22.88■■□□□ 1.25
CHMP2A-203ENST00000597209 CCDC85AQ96PX6 553 aaPredicted RBP22.88■■□□□ 1.25
CHMP2A-203ENST00000597209 CDC5LQ99459 802 aaKnown RBP22.88■■□□□ 1.25
CHMP2A-203ENST00000597209 MAP1SQ66K74 1059 aaPredicted RBP22.87■■□□□ 1.25
CHMP2A-203ENST00000597209 UBE3BQ7Z3V4 1068 aa22.87■■□□□ 1.25
CHMP2A-203ENST00000597209 TMEM88BA6NKF7 163 aa22.86■■□□□ 1.25
CHMP2A-203ENST00000597209 RIMBP2O15034 1052 aa22.86■■□□□ 1.25
CHMP2A-203ENST00000597209 CASP7P55210 303 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms