RNA–Protein interactions for RNA: ENST00000595047.5

GTF2F1-205, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 5

Gene GTF2F1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-205ENST00000595047 RABL6Q3YEC7 729 aaPredicted RBP22.82■■□□□ 1.24
GTF2F1-205ENST00000595047 RPGRQ92834 1020 aaKnown RBP22.82■■□□□ 1.24
GTF2F1-205ENST00000595047 TGFB2P61812 414 aa22.81■■□□□ 1.24
GTF2F1-205ENST00000595047 CRY2Q49AN0 593 aa22.81■■□□□ 1.24
GTF2F1-205ENST00000595047 RBM17Q96I25 401 aaKnown RBP22.8■■□□□ 1.24
GTF2F1-205ENST00000595047 GREM2Q9H772 168 aa22.8■■□□□ 1.24
GTF2F1-205ENST00000595047 SRGNP10124 158 aa22.79■■□□□ 1.24
GTF2F1-205ENST00000595047 NPR1P16066 1061 aa22.79■■□□□ 1.24
GTF2F1-205ENST00000595047 CHRNA5P30532 468 aa22.79■■□□□ 1.24
GTF2F1-205ENST00000595047 FAM161AQ3B820 660 aa22.79■■□□□ 1.24
GTF2F1-205ENST00000595047 DDX46Q7L014 1031 aaKnown RBP22.79■■□□□ 1.24
GTF2F1-205ENST00000595047 ATP8B2P98198 1209 aa22.78■■□□□ 1.24
GTF2F1-205ENST00000595047 IFIT5Q13325 482 aaKnown RBP22.78■■□□□ 1.24
GTF2F1-205ENST00000595047 CCDC57Q2TAC2 916 aa22.78■■□□□ 1.24
GTF2F1-205ENST00000595047 CEP85Q6P2H3 762 aa22.78■■□□□ 1.24
GTF2F1-205ENST00000595047 ZNF622Q969S3 477 aaKnown RBP eCLIP22.78■■□□□ 1.245e-9■■■□□ 18.4
GTF2F1-205ENST00000595047 MASTLQ96GX5 879 aa22.78■■□□□ 1.24
GTF2F1-205ENST00000595047 A0A0G2JLW4 131 aa22.77■■□□□ 1.24
GTF2F1-205ENST00000595047 ANKRD18BA2A2Z9 1011 aa22.77■■□□□ 1.24
GTF2F1-205ENST00000595047 SRGAP3O43295 1099 aa22.77■■□□□ 1.24
GTF2F1-205ENST00000595047 DPEP1P16444 411 aa22.77■■□□□ 1.24
GTF2F1-205ENST00000595047 ITGA6P23229 1130 aa22.77■■□□□ 1.24
GTF2F1-205ENST00000595047 MTX1Q13505 466 aa22.77■■□□□ 1.24
GTF2F1-205ENST00000595047 RPAP2Q8IXW5 612 aaPredicted RBP22.77■■□□□ 1.24
GTF2F1-205ENST00000595047 FHDC1Q9C0D6 1143 aaPredicted RBP22.77■■□□□ 1.24
GTF2F1-205ENST00000595047 SEC31BQ9NQW1 1179 aa22.77■■□□□ 1.24
GTF2F1-205ENST00000595047 STYK1Q6J9G0 422 aa22.76■■□□□ 1.23
GTF2F1-205ENST00000595047 HOXA10P31260 410 aaPredicted RBP22.76■■□□□ 1.23
GTF2F1-205ENST00000595047 TAF7LQ5H9L4 462 aa22.76■■□□□ 1.23
GTF2F1-205ENST00000595047 RTL9Q8NET4 1388 aa22.75■■□□□ 1.23
GTF2F1-205ENST00000595047 PNMA6EA0A0J9YXQ4 647 aa22.75■■□□□ 1.23
GTF2F1-205ENST00000595047 CRAMP1Q96RY5 1269 aa22.75■■□□□ 1.23
GTF2F1-205ENST00000595047 CDC5LQ99459 802 aaKnown RBP22.75■■□□□ 1.23
GTF2F1-205ENST00000595047 PCDHB15Q9Y5E8 787 aa22.75■■□□□ 1.23
GTF2F1-205ENST00000595047 ALDH1B1P30837 517 aa22.74■■□□□ 1.23
GTF2F1-205ENST00000595047 GRAPQ13588 217 aa22.74■■□□□ 1.23
GTF2F1-205ENST00000595047 GRAPLQ8TC17 118 aaPredicted RBP22.74■■□□□ 1.23
GTF2F1-205ENST00000595047 TNRC6CQ9HCJ0 1690 aaKnown RBP22.73■■□□□ 1.23
GTF2F1-205ENST00000595047 HMMRO75330 724 aa22.73■■□□□ 1.23
GTF2F1-205ENST00000595047 ANKRD18AQ8IVF6 992 aa22.73■■□□□ 1.23
GTF2F1-205ENST00000595047 NLGN2Q8NFZ4 835 aa22.73■■□□□ 1.23
GTF2F1-205ENST00000595047 CNKSR1Q969H4 720 aa22.73■■□□□ 1.23
GTF2F1-205ENST00000595047 DDX60Q8IY21 1712 aaKnown RBP22.73■■□□□ 1.23
GTF2F1-205ENST00000595047 KCNA3P22001 575 aa22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 IGHMBP2P38935 993 aaKnown RBP22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 RFX5P48382 616 aaPredicted RBP22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 RPS8P62241 208 aaKnown RBP22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 POLA2Q14181 598 aa22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 SIRT2Q8IXJ6 389 aa22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 SSH3Q8TE77 659 aa22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 CELF1Q92879 486 aaKnown RBP22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 ZNF594Q96JF6 807 aaPredicted RBP22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 SYT17Q9BSW7 474 aa22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 PIM2Q9P1W9 311 aa22.72■■□□□ 1.23
GTF2F1-205ENST00000595047 BBOX1O75936 387 aa22.71■■□□□ 1.23
GTF2F1-205ENST00000595047 KLHDC4Q8TBB5 520 aa22.71■■□□□ 1.23
GTF2F1-205ENST00000595047 MPHOSPH8Q99549 860 aa22.71■■□□□ 1.23
GTF2F1-205ENST00000595047 PTPN12Q05209 780 aaKnown RBP22.7■■□□□ 1.22
GTF2F1-205ENST00000595047 TTLL6Q8N841 843 aa22.7■■□□□ 1.22
GTF2F1-205ENST00000595047 LAMB2P55268 1798 aa22.69■■□□□ 1.22
GTF2F1-205ENST00000595047 PA2G4Q9UQ80 394 aaKnown RBP22.69■■□□□ 1.22
GTF2F1-205ENST00000595047 ANKRD31Q8N7Z5 1873 aa22.69■■□□□ 1.22
GTF2F1-205ENST00000595047 ERICH6BQ5W0A0 696 aa22.68■■□□□ 1.22
GTF2F1-205ENST00000595047 PRPF40BQ6NWY9 871 aaKnown RBP22.68■■□□□ 1.22
GTF2F1-205ENST00000595047 LDHAL6AQ6ZMR3 332 aa22.68■■□□□ 1.22
GTF2F1-205ENST00000595047 PPEF1O14829 653 aaPredicted RBP22.67■■□□□ 1.22
GTF2F1-205ENST00000595047 SIL1Q9H173 461 aa22.67■■□□□ 1.22
GTF2F1-205ENST00000595047 COPRSQ9NQ92 184 aa22.67■■□□□ 1.22
GTF2F1-205ENST00000595047 CNNM1Q9NRU3 951 aa22.67■■□□□ 1.22
GTF2F1-205ENST00000595047 BSDC1Q9NW68 430 aaPredicted RBP22.67■■□□□ 1.22
GTF2F1-205ENST00000595047 WWC3Q9ULE0 1092 aa22.67■■□□□ 1.22
GTF2F1-205ENST00000595047 SURF6O75683 361 aaKnown RBP22.66■■□□□ 1.22
GTF2F1-205ENST00000595047 DALRD3Q5D0E6 543 aaKnown RBP22.66■■□□□ 1.22
GTF2F1-205ENST00000595047 TMC4Q7Z404 712 aa22.66■■□□□ 1.22
GTF2F1-205ENST00000595047 RWDD1Q9H446 243 aaPredicted RBP22.66■■□□□ 1.22
GTF2F1-205ENST00000595047 PUS3Q9BZE2 481 aaKnown RBP22.65■■□□□ 1.22
GTF2F1-205ENST00000595047 TMX4Q9H1E5 349 aaPredicted RBP22.65■■□□□ 1.22
GTF2F1-205ENST00000595047 LRP5O75197 1615 aa22.65■■□□□ 1.22
GTF2F1-205ENST00000595047 KIF13BQ9NQT8 1826 aa22.65■■□□□ 1.22
GTF2F1-205ENST00000595047 EYA2O00167 538 aa22.64■■□□□ 1.22
GTF2F1-205ENST00000595047 G3BP1Q13283 466 aaKnown RBP eCLIP22.64■■□□□ 1.221e-8■■■■■ 33.6
GTF2F1-205ENST00000595047 HDAC1Q13547 482 aaPredicted RBP22.64■■□□□ 1.22
GTF2F1-205ENST00000595047 LRRC24Q50LG9 513 aa22.64■■□□□ 1.22
GTF2F1-205ENST00000595047 ZNF219Q9P2Y4 722 aaPredicted RBP22.64■■□□□ 1.22
GTF2F1-205ENST00000595047 FBXO3Q9UK99 471 aa22.64■■□□□ 1.22
GTF2F1-205ENST00000595047 OS9Q13438 667 aaPredicted RBP22.63■■□□□ 1.21
GTF2F1-205ENST00000595047 SP8Q8IXZ3 490 aa22.63■■□□□ 1.21
GTF2F1-205ENST00000595047 BCS1LQ9Y276 419 aa22.63■■□□□ 1.21
GTF2F1-205ENST00000595047 NOP58Q9Y2X3 529 aaKnown RBP22.63■■□□□ 1.21
GTF2F1-205ENST00000595047 ATP6V0A2Q9Y487 856 aa22.63■■□□□ 1.21
GTF2F1-205ENST00000595047 CIAO1O76071 339 aa22.63■■□□□ 1.21
GTF2F1-205ENST00000595047 HSP90AB4PQ58FF6 505 aa22.63■■□□□ 1.21
GTF2F1-205ENST00000595047 COL11A2P13942 1736 aaPredicted RBP22.62■■□□□ 1.21
GTF2F1-205ENST00000595047 C21orf2O43822 256 aa22.62■■□□□ 1.21
GTF2F1-205ENST00000595047 IL15P40933 162 aaPredicted RBP22.62■■□□□ 1.21
GTF2F1-205ENST00000595047 MINPP1Q9UNW1 487 aa22.62■■□□□ 1.21
GTF2F1-205ENST00000595047 EXOC6BQ9Y2D4 811 aa22.62■■□□□ 1.21
GTF2F1-205ENST00000595047 RIPOR2Q9Y4F9 1068 aa22.62■■□□□ 1.21
GTF2F1-205ENST00000595047 IGHDP01880 384 aa22.61■■□□□ 1.21
GTF2F1-205ENST00000595047 ATG9AQ7Z3C6 839 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms