RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 CRY2Q49AN0 593 aa21.71■■□□□ 1.07
AP3D1-211ENST00000591650 NLRP3Q96P20 1036 aa21.71■■□□□ 1.07
AP3D1-211ENST00000591650 PDE6BP35913 854 aa21.7■■□□□ 1.06
AP3D1-211ENST00000591650 CCDC85AQ96PX6 553 aaPredicted RBP21.7■■□□□ 1.06
AP3D1-211ENST00000591650 ZBTB40Q9NUA8 1239 aa21.7■■□□□ 1.06
AP3D1-211ENST00000591650 A0A0G2JLW4 131 aa21.69■■□□□ 1.06
AP3D1-211ENST00000591650 GNAI2P04899 355 aa21.69■■□□□ 1.06
AP3D1-211ENST00000591650 HSP90B1P14625 803 aaKnown RBP21.69■■□□□ 1.06
AP3D1-211ENST00000591650 FAM161AQ3B820 660 aa21.69■■□□□ 1.06
AP3D1-211ENST00000591650 C2CD5Q86YS7 1000 aa21.69■■□□□ 1.06
AP3D1-211ENST00000591650 TTLL11Q8NHH1 800 aa21.69■■□□□ 1.06
AP3D1-211ENST00000591650 EXOC6Q8TAG9 804 aa21.69■■□□□ 1.06
AP3D1-211ENST00000591650 DPEP1P16444 411 aa21.68■■□□□ 1.06
AP3D1-211ENST00000591650 TGFB2P61812 414 aa21.68■■□□□ 1.06
AP3D1-211ENST00000591650 SF3B3Q15393 1217 aaKnown RBP21.68■■□□□ 1.06
AP3D1-211ENST00000591650 RABL6Q3YEC7 729 aaPredicted RBP21.68■■□□□ 1.06
AP3D1-211ENST00000591650 SLX4Q8IY92 1834 aa21.67■■□□□ 1.06
AP3D1-211ENST00000591650 A0A1B0GUL6 1792 aa21.67■■□□□ 1.06
AP3D1-211ENST00000591650 RTL9Q8NET4 1388 aa21.67■■□□□ 1.06
AP3D1-211ENST00000591650 SRGNP10124 158 aa21.67■■□□□ 1.06
AP3D1-211ENST00000591650 KCNA3P22001 575 aa21.67■■□□□ 1.06
AP3D1-211ENST00000591650 LMBR1LQ6UX01 489 aa21.67■■□□□ 1.06
AP3D1-211ENST00000591650 GREM2Q9H772 168 aa21.67■■□□□ 1.06
AP3D1-211ENST00000591650 LRRC37AA6NMS7 1700 aa21.67■■□□□ 1.06
AP3D1-211ENST00000591650 CSF1RP07333 972 aa21.66■■□□□ 1.06
AP3D1-211ENST00000591650 CCDC152Q4G0S7 254 aa21.66■■□□□ 1.06
AP3D1-211ENST00000591650 H0YIN7 160 aa21.65■■□□□ 1.06
AP3D1-211ENST00000591650 RPGRQ92834 1020 aaKnown RBP21.65■■□□□ 1.06
AP3D1-211ENST00000591650 CHMP3Q9Y3E7 222 aa21.65■■□□□ 1.06
AP3D1-211ENST00000591650 NPR1P16066 1061 aa21.64■■□□□ 1.06
AP3D1-211ENST00000591650 CHMP4BQ9H444 224 aaKnown RBP21.64■■□□□ 1.06
AP3D1-211ENST00000591650 SEC31BQ9NQW1 1179 aa21.64■■□□□ 1.06
AP3D1-211ENST00000591650 HDAC5Q9UQL6 1122 aa21.64■■□□□ 1.06
AP3D1-211ENST00000591650 ARFGEF1Q9Y6D6 1849 aa21.64■■□□□ 1.05
AP3D1-211ENST00000591650 HOXA10P31260 410 aaPredicted RBP21.63■■□□□ 1.05
AP3D1-211ENST00000591650 MASTLQ96GX5 879 aa21.63■■□□□ 1.05
AP3D1-211ENST00000591650 WWC3Q9ULE0 1092 aa21.63■■□□□ 1.05
AP3D1-211ENST00000591650 PDZRN3Q9UPQ7 1066 aa21.63■■□□□ 1.05
AP3D1-211ENST00000591650 CEP85Q6P2H3 762 aa21.63■■□□□ 1.05
AP3D1-211ENST00000591650 ITGA6P23229 1130 aa21.62■■□□□ 1.05
AP3D1-211ENST00000591650 MTX1Q13505 466 aa21.62■■□□□ 1.05
AP3D1-211ENST00000591650 STYK1Q6J9G0 422 aa21.62■■□□□ 1.05
AP3D1-211ENST00000591650 DDX46Q7L014 1031 aaKnown RBP21.62■■□□□ 1.05
AP3D1-211ENST00000591650 SLC51AQ86UW1 340 aa21.62■■□□□ 1.05
AP3D1-211ENST00000591650 ZNF622Q969S3 477 aaKnown RBP eCLIP21.62■■□□□ 1.051e-7■■□□□ 11.8
AP3D1-211ENST00000591650 PNMA6EA0A0J9YXQ4 647 aa21.61■■□□□ 1.05
AP3D1-211ENST00000591650 CELF1Q92879 486 aaKnown RBP21.61■■□□□ 1.05
AP3D1-211ENST00000591650 RBM17Q96I25 401 aaKnown RBP21.61■■□□□ 1.05
AP3D1-211ENST00000591650 GOLGB1Q14789 3259 aaKnown RBP21.6■■□□□ 1.05
AP3D1-211ENST00000591650 LTBP1Q14766 1721 aa21.59■■□□□ 1.05
AP3D1-211ENST00000591650 SRGAP3O43295 1099 aa21.59■■□□□ 1.05
AP3D1-211ENST00000591650 RFX5P48382 616 aaPredicted RBP21.59■■□□□ 1.05
AP3D1-211ENST00000591650 IFIT5Q13325 482 aaKnown RBP21.59■■□□□ 1.05
AP3D1-211ENST00000591650 GRAPQ13588 217 aa21.59■■□□□ 1.05
AP3D1-211ENST00000591650 GRAPLQ8TC17 118 aaPredicted RBP21.59■■□□□ 1.05
AP3D1-211ENST00000591650 CRAMP1Q96RY5 1269 aa21.59■■□□□ 1.05
AP3D1-211ENST00000591650 ANKRD18BA2A2Z9 1011 aa21.58■■□□□ 1.05
AP3D1-211ENST00000591650 NEFLP07196 543 aa21.58■■□□□ 1.05
AP3D1-211ENST00000591650 CCDC57Q2TAC2 916 aa21.58■■□□□ 1.05
AP3D1-211ENST00000591650 PRPF40BQ6NWY9 871 aaKnown RBP21.58■■□□□ 1.05
AP3D1-211ENST00000591650 SIRT2Q8IXJ6 389 aa21.58■■□□□ 1.05
AP3D1-211ENST00000591650 KLHDC4Q8TBB5 520 aa21.58■■□□□ 1.05
AP3D1-211ENST00000591650 ZNF594Q96JF6 807 aaPredicted RBP21.58■■□□□ 1.05
AP3D1-211ENST00000591650 PIM2Q9P1W9 311 aa21.58■■□□□ 1.05
AP3D1-211ENST00000591650 PCDHB15Q9Y5E8 787 aa21.58■■□□□ 1.05
AP3D1-211ENST00000591650 CNKSR1Q969H4 720 aa21.57■■□□□ 1.04
AP3D1-211ENST00000591650 CDC5LQ99459 802 aaKnown RBP21.57■■□□□ 1.04
AP3D1-211ENST00000591650 ATP8B2P98198 1209 aa21.56■■□□□ 1.04
AP3D1-211ENST00000591650 PPEF1O14829 653 aaPredicted RBP21.55■■□□□ 1.04
AP3D1-211ENST00000591650 YBX3P16989 372 aaKnown RBP eCLIP21.55■■□□□ 1.04
AP3D1-211ENST00000591650 POLA2Q14181 598 aa21.55■■□□□ 1.04
AP3D1-211ENST00000591650 TTLL6Q8N841 843 aa21.55■■□□□ 1.04
AP3D1-211ENST00000591650 SSH3Q8TE77 659 aa21.55■■□□□ 1.04
AP3D1-211ENST00000591650 PA2G4Q9UQ80 394 aaKnown RBP21.55■■□□□ 1.04
AP3D1-211ENST00000591650 ALDH1B1P30837 517 aa21.55■■□□□ 1.04
AP3D1-211ENST00000591650 RPS8P62241 208 aaKnown RBP21.55■■□□□ 1.04
AP3D1-211ENST00000591650 PTPN12Q05209 780 aaKnown RBP21.55■■□□□ 1.04
AP3D1-211ENST00000591650 AAMPQ13685 434 aa21.55■■□□□ 1.04
AP3D1-211ENST00000591650 DALRD3Q5D0E6 543 aaKnown RBP21.55■■□□□ 1.04
AP3D1-211ENST00000591650 TAF7LQ5H9L4 462 aa21.55■■□□□ 1.04
AP3D1-211ENST00000591650 ANKRD18AQ8IVF6 992 aa21.55■■□□□ 1.04
AP3D1-211ENST00000591650 BCS1LQ9Y276 419 aa21.55■■□□□ 1.04
AP3D1-211ENST00000591650 FER1L6Q2WGJ9 1857 aa21.54■■□□□ 1.04
AP3D1-211ENST00000591650 OLFM4Q6UX06 510 aa21.54■■□□□ 1.04
AP3D1-211ENST00000591650 RPAP2Q8IXW5 612 aaPredicted RBP21.54■■□□□ 1.04
AP3D1-211ENST00000591650 PELP1Q8IZL8 1130 aaKnown RBP21.54■■□□□ 1.04
AP3D1-211ENST00000591650 SNED1Q8TER0 1413 aa21.53■■□□□ 1.04
AP3D1-211ENST00000591650 DUOX1Q9NRD9 1551 aa21.53■■□□□ 1.04
AP3D1-211ENST00000591650 IGHMBP2P38935 993 aaKnown RBP21.53■■□□□ 1.04
AP3D1-211ENST00000591650 PUS3Q9BZE2 481 aaKnown RBP21.53■■□□□ 1.04
AP3D1-211ENST00000591650 ZNF219Q9P2Y4 722 aaPredicted RBP21.53■■□□□ 1.04
AP3D1-211ENST00000591650 SIL1Q9H173 461 aa21.52■■□□□ 1.04
AP3D1-211ENST00000591650 COPRSQ9NQ92 184 aa21.52■■□□□ 1.04
AP3D1-211ENST00000591650 BBOX1O75936 387 aa21.51■■□□□ 1.03
AP3D1-211ENST00000591650 LRRC24Q50LG9 513 aa21.51■■□□□ 1.03
AP3D1-211ENST00000591650 MPHOSPH8Q99549 860 aa21.51■■□□□ 1.03
AP3D1-211ENST00000591650 GPR162Q16538 588 aa21.5■■□□□ 1.03
AP3D1-211ENST00000591650 C7orf43Q8WVR3 580 aa21.5■■□□□ 1.03
AP3D1-211ENST00000591650 BSDC1Q9NW68 430 aaPredicted RBP21.5■■□□□ 1.03
AP3D1-211ENST00000591650 ATP6V0A2Q9Y487 856 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms