RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 RIC3Q7Z5B4 369 aa27.41■■□□□ 1.98
R3HDM4-206ENST00000590454 ZNF428Q96B54 188 aa27.41■■□□□ 1.98
R3HDM4-206ENST00000590454 UBN2Q6ZU65 1347 aa27.41■■□□□ 1.98
R3HDM4-206ENST00000590454 WDR33Q9C0J8 1336 aaKnown RBP27.41■■□□□ 1.98
R3HDM4-206ENST00000590454 PI4KAP2A4QPH2 592 aa27.4■■□□□ 1.98
R3HDM4-206ENST00000590454 FAM177BA6PVY3 158 aa27.4■■□□□ 1.98
R3HDM4-206ENST00000590454 HSPA8P11142 646 aaKnown RBP27.4■■□□□ 1.98
R3HDM4-206ENST00000590454 GTF2E1P29083 439 aaPredicted RBP27.4■■□□□ 1.98
R3HDM4-206ENST00000590454 ZNF34Q8IZ26 560 aa27.4■■□□□ 1.98
R3HDM4-206ENST00000590454 PI4KAP1Q8N8J0 262 aa27.4■■□□□ 1.98
R3HDM4-206ENST00000590454 JDP2Q8WYK2 163 aa27.4■■□□□ 1.98
R3HDM4-206ENST00000590454 SMC4Q9NTJ3 1288 aa27.4■■□□□ 1.98
R3HDM4-206ENST00000590454 ABT1Q9ULW3 272 aaKnown RBP27.4■■□□□ 1.98
R3HDM4-206ENST00000590454 KSR2Q6VAB6 950 aa27.39■■□□□ 1.98
R3HDM4-206ENST00000590454 MAP3K2Q9Y2U5 619 aa27.39■■□□□ 1.98
R3HDM4-206ENST00000590454 ADAMTSL1Q8N6G6 1762 aa27.39■■□□□ 1.98
R3HDM4-206ENST00000590454 ANKRD36CQ5JPF3 1778 aa27.38■■□□□ 1.97
R3HDM4-206ENST00000590454 FKBP5Q13451 457 aaPredicted RBP27.38■■□□□ 1.97
R3HDM4-206ENST00000590454 TCIRG1Q13488 830 aa27.38■■□□□ 1.97
R3HDM4-206ENST00000590454 PSMD1Q99460 953 aa27.38■■□□□ 1.97
R3HDM4-206ENST00000590454 ATP5J2-PTCD1G3V325 749 aa27.37■■□□□ 1.97
R3HDM4-206ENST00000590454 BCAR3O75815 825 aa27.37■■□□□ 1.97
R3HDM4-206ENST00000590454 DDX58O95786 925 aaKnown RBP27.37■■□□□ 1.97
R3HDM4-206ENST00000590454 ABHD8Q96I13 439 aa27.37■■□□□ 1.97
R3HDM4-206ENST00000590454 F6X3S4 739 aa27.36■■□□□ 1.97
R3HDM4-206ENST00000590454 EIF6P56537 245 aaKnown RBP27.36■■□□□ 1.97
R3HDM4-206ENST00000590454 CC2D2BQ6DHV5 1058 aa27.35■■□□□ 1.97
R3HDM4-206ENST00000590454 MYD88Q99836 296 aa27.35■■□□□ 1.97
R3HDM4-206ENST00000590454 METTL22Q9BUU2 404 aaPredicted RBP27.35■■□□□ 1.97
R3HDM4-206ENST00000590454 LMOD1P29536 600 aaPredicted RBP27.34■■□□□ 1.97
R3HDM4-206ENST00000590454 SUSD4Q5VX71 490 aa27.34■■□□□ 1.97
R3HDM4-206ENST00000590454 ISCA1Q9BUE6 129 aa27.34■■□□□ 1.97
R3HDM4-206ENST00000590454 GJA3Q9Y6H8 435 aa27.34■■□□□ 1.97
R3HDM4-206ENST00000590454 NLRP10Q86W26 655 aa27.33■■□□□ 1.97
R3HDM4-206ENST00000590454 NYXQ9GZU5 481 aa27.33■■□□□ 1.97
R3HDM4-206ENST00000590454 NOB1Q9ULX3 412 aaKnown RBP27.33■■□□□ 1.97
R3HDM4-206ENST00000590454 CRY2Q49AN0 593 aa27.32■■□□□ 1.96
R3HDM4-206ENST00000590454 HSP90AB3PQ58FF7 597 aa27.32■■□□□ 1.96
R3HDM4-206ENST00000590454 IGKV5-2P06315 115 aa27.31■■□□□ 1.96
R3HDM4-206ENST00000590454 ECE1P42892 770 aa27.31■■□□□ 1.96
R3HDM4-206ENST00000590454 BRPF1P55201 1214 aaPredicted RBP27.31■■□□□ 1.96
R3HDM4-206ENST00000590454 GRIPAP1Q4V328 841 aa27.31■■□□□ 1.96
R3HDM4-206ENST00000590454 DNAAF4Q8WXU2 420 aa27.31■■□□□ 1.96
R3HDM4-206ENST00000590454 BEGAINQ9BUH8 593 aa27.31■■□□□ 1.96
R3HDM4-206ENST00000590454 SNED1Q8TER0 1413 aa27.31■■□□□ 1.96
R3HDM4-206ENST00000590454 NTSR2O95665 410 aa27.29■■□□□ 1.96
R3HDM4-206ENST00000590454 CWF19L2Q2TBE0 894 aaKnown RBP27.29■■□□□ 1.96
R3HDM4-206ENST00000590454 PAXIP1Q6ZW49 1069 aaPredicted RBP27.29■■□□□ 1.96
R3HDM4-206ENST00000590454 NUTM1Q86Y26 1132 aa27.29■■□□□ 1.96
R3HDM4-206ENST00000590454 CAPNS2Q96L46 248 aa27.29■■□□□ 1.96
R3HDM4-206ENST00000590454 PTPRCP08575 1304 aa27.28■■□□□ 1.96
R3HDM4-206ENST00000590454 SLC34A2O95436 690 aa27.28■■□□□ 1.96
R3HDM4-206ENST00000590454 FAM161AQ3B820 660 aa27.28■■□□□ 1.96
R3HDM4-206ENST00000590454 PARP10Q53GL7 1025 aa27.28■■□□□ 1.96
R3HDM4-206ENST00000590454 RPGRQ92834 1020 aaKnown RBP27.28■■□□□ 1.96
R3HDM4-206ENST00000590454 TNNQ9UQP3 1299 aa27.28■■□□□ 1.96
R3HDM4-206ENST00000590454 EPS15P42566 896 aa27.27■■□□□ 1.96
R3HDM4-206ENST00000590454 SCNN1DP51172 638 aa27.27■■□□□ 1.96
R3HDM4-206ENST00000590454 TRIM28Q13263 835 aaKnown RBP27.27■■□□□ 1.96
R3HDM4-206ENST00000590454 USP50Q70EL3 339 aaPredicted RBP27.27■■□□□ 1.96
R3HDM4-206ENST00000590454 LARGE2Q8N3Y3 721 aa27.27■■□□□ 1.96
R3HDM4-206ENST00000590454 GPR101Q96P66 508 aaPredicted RBP27.27■■□□□ 1.96
R3HDM4-206ENST00000590454 ABCC12Q96J65 1359 aa27.26■■□□□ 1.95
R3HDM4-206ENST00000590454 HOXA10P31260 410 aaPredicted RBP27.26■■□□□ 1.95
R3HDM4-206ENST00000590454 UTP14AQ9BVJ6 771 aaKnown RBP27.26■■□□□ 1.95
R3HDM4-206ENST00000590454 FMR1Q06787 632 aaKnown RBP eCLIP27.25■■□□□ 1.95
R3HDM4-206ENST00000590454 BEND3Q5T5X7 828 aa27.25■■□□□ 1.95
R3HDM4-206ENST00000590454 SLC4A10Q6U841 1118 aa27.25■■□□□ 1.95
R3HDM4-206ENST00000590454 JARID2Q92833 1246 aaPredicted RBP27.25■■□□□ 1.95
R3HDM4-206ENST00000590454 FRAT1Q92837 279 aaPredicted RBP27.25■■□□□ 1.95
R3HDM4-206ENST00000590454 RCAN3Q9UKA8 241 aa27.25■■□□□ 1.95
R3HDM4-206ENST00000590454 NEURL1BA8MQ27 555 aa27.24■■□□□ 1.95
R3HDM4-206ENST00000590454 GRM1Q13255 1194 aa27.24■■□□□ 1.95
R3HDM4-206ENST00000590454 CYP4F22Q6NT55 531 aa27.24■■□□□ 1.95
R3HDM4-206ENST00000590454 PPP1R42Q7Z4L9 355 aa27.24■■□□□ 1.95
R3HDM4-206ENST00000590454 TRMT112Q9UI30 125 aaKnown RBP27.24■■□□□ 1.95
R3HDM4-206ENST00000590454 IBTKQ9P2D0 1353 aaPredicted RBP27.23■■□□□ 1.95
R3HDM4-206ENST00000590454 KIF16BQ96L93 1317 aa27.23■■□□□ 1.95
R3HDM4-206ENST00000590454 NEXNQ0ZGT2 675 aa27.23■■□□□ 1.95
R3HDM4-206ENST00000590454 RTL5Q5HYW3 569 aaPredicted RBP27.23■■□□□ 1.95
R3HDM4-206ENST00000590454 CST9Q5W186 159 aa27.23■■□□□ 1.95
R3HDM4-206ENST00000590454 RBM17Q96I25 401 aaKnown RBP27.23■■□□□ 1.95
R3HDM4-206ENST00000590454 COL4A5P29400 1685 aa27.23■■□□□ 1.95
R3HDM4-206ENST00000590454 CCDC85CA6NKD9 419 aa27.22■■□□□ 1.95
R3HDM4-206ENST00000590454 NIM1KQ8IY84 436 aa27.22■■□□□ 1.95
R3HDM4-206ENST00000590454 CCDC191Q8NCU4 936 aa27.22■■□□□ 1.95
R3HDM4-206ENST00000590454 LINS1Q8NG48 757 aa27.22■■□□□ 1.95
R3HDM4-206ENST00000590454 FAM89AQ96GI7 184 aa27.22■■□□□ 1.95
R3HDM4-206ENST00000590454 CRAMP1Q96RY5 1269 aa27.22■■□□□ 1.95
R3HDM4-206ENST00000590454 CWC25Q9NXE8 425 aaPredicted RBP27.22■■□□□ 1.95
R3HDM4-206ENST00000590454 TLL2Q9Y6L7 1015 aa27.22■■□□□ 1.95
R3HDM4-206ENST00000590454 LTBP1Q14766 1721 aa27.21■■□□□ 1.95
R3HDM4-206ENST00000590454 TRAF5O00463 557 aa27.2■■□□□ 1.94
R3HDM4-206ENST00000590454 PPEF1O14829 653 aaPredicted RBP27.2■■□□□ 1.94
R3HDM4-206ENST00000590454 MAP2K2P36507 400 aa27.2■■□□□ 1.94
R3HDM4-206ENST00000590454 MLLT1Q03111 559 aaPredicted RBP27.2■■□□□ 1.94
R3HDM4-206ENST00000590454 RIC1Q4ADV7 1423 aa27.2■■□□□ 1.94
R3HDM4-206ENST00000590454 C3orf67Q6ZVT6 689 aa27.2■■□□□ 1.94
R3HDM4-206ENST00000590454 HCLS1P14317 486 aaPredicted RBP27.19■■□□□ 1.94
R3HDM4-206ENST00000590454 TRIM27P14373 513 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms