RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 CCDC152Q4G0S7 254 aa16.15■□□□□ 0.18
DDX39A-213ENST00000590315 C20orf194Q5TEA3 1177 aa16.15■□□□□ 0.18
DDX39A-213ENST00000590315 DDX46Q7L014 1031 aaKnown RBP16.15■□□□□ 0.18
DDX39A-213ENST00000590315 SUCLG2Q96I99 432 aa16.15■□□□□ 0.18
DDX39A-213ENST00000590315 USP44Q9H0E7 712 aa16.15■□□□□ 0.18
DDX39A-213ENST00000590315 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
DDX39A-213ENST00000590315 BCS1LQ9Y276 419 aa16.15■□□□□ 0.18
DDX39A-213ENST00000590315 SRGNP10124 158 aa16.14■□□□□ 0.17
DDX39A-213ENST00000590315 CASP7P55210 303 aa16.14■□□□□ 0.17
DDX39A-213ENST00000590315 MVPQ14764 893 aaKnown RBP16.14■□□□□ 0.17
DDX39A-213ENST00000590315 STYK1Q6J9G0 422 aa16.14■□□□□ 0.17
DDX39A-213ENST00000590315 HDAC5Q9UQL6 1122 aa16.14■□□□□ 0.17
DDX39A-213ENST00000590315 A0A1B0GUL6 1792 aa16.13■□□□□ 0.17
DDX39A-213ENST00000590315 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
DDX39A-213ENST00000590315 PDE3AQ14432 1141 aa16.13■□□□□ 0.17
DDX39A-213ENST00000590315 DALRD3Q5D0E6 543 aaKnown RBP16.13■□□□□ 0.17
DDX39A-213ENST00000590315 CNKSR1Q969H4 720 aa16.13■□□□□ 0.17
DDX39A-213ENST00000590315 DDX19BQ9UMR2 479 aa16.13■□□□□ 0.17
DDX39A-213ENST00000590315 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
DDX39A-213ENST00000590315 ALDH1B1P30837 517 aa16.12■□□□□ 0.17
DDX39A-213ENST00000590315 GPR162Q16538 588 aa16.12■□□□□ 0.17
DDX39A-213ENST00000590315 FAM161AQ3B820 660 aa16.12■□□□□ 0.17
DDX39A-213ENST00000590315 TAF7LQ5H9L4 462 aa16.12■□□□□ 0.17
DDX39A-213ENST00000590315 LMBR1LQ6UX01 489 aa16.12■□□□□ 0.17
DDX39A-213ENST00000590315 TTLL6Q8N841 843 aa16.12■□□□□ 0.17
DDX39A-213ENST00000590315 BICC1Q9H694 974 aaKnown RBP16.12■□□□□ 0.17
DDX39A-213ENST00000590315 UTYO14607 1347 aa16.12■□□□□ 0.17
DDX39A-213ENST00000590315 COL4A1P02462 1669 aa16.11■□□□□ 0.17
DDX39A-213ENST00000590315 LRRC37AA6NMS7 1700 aa16.11■□□□□ 0.17
DDX39A-213ENST00000590315 SF3B3Q15393 1217 aaKnown RBP16.11■□□□□ 0.17
DDX39A-213ENST00000590315 CRY2Q49AN0 593 aa16.11■□□□□ 0.17
DDX39A-213ENST00000590315 EPHA10Q5JZY3 1008 aa16.11■□□□□ 0.17
DDX39A-213ENST00000590315 PRPF40BQ6NWY9 871 aaKnown RBP16.11■□□□□ 0.17
DDX39A-213ENST00000590315 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
DDX39A-213ENST00000590315 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
DDX39A-213ENST00000590315 GREM2Q9H772 168 aa16.11■□□□□ 0.17
DDX39A-213ENST00000590315 C1orf115Q9H7X2 142 aa16.11■□□□□ 0.17
DDX39A-213ENST00000590315 FER1L6Q2WGJ9 1857 aa16.1■□□□□ 0.17
DDX39A-213ENST00000590315 PPEF1O14829 653 aaPredicted RBP16.1■□□□□ 0.17
DDX39A-213ENST00000590315 GNAI2P04899 355 aa16.1■□□□□ 0.17
DDX39A-213ENST00000590315 KCNA3P22001 575 aa16.1■□□□□ 0.17
DDX39A-213ENST00000590315 FOXO4P98177 505 aa16.1■□□□□ 0.17
DDX39A-213ENST00000590315 TTLL11Q8NHH1 800 aa16.1■□□□□ 0.17
DDX39A-213ENST00000590315 CDC5LQ99459 802 aaKnown RBP16.1■□□□□ 0.17
DDX39A-213ENST00000590315 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
DDX39A-213ENST00000590315 SEC31BQ9NQW1 1179 aa16.1■□□□□ 0.17
DDX39A-213ENST00000590315 ANKRD18BA2A2Z9 1011 aa16.09■□□□□ 0.17
DDX39A-213ENST00000590315 KLRG2A4D1S0 409 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-213ENST00000590315 ITGA6P23229 1130 aa16.09■□□□□ 0.17
DDX39A-213ENST00000590315 IRX6P78412 446 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-213ENST00000590315 IFIT5Q13325 482 aaKnown RBP16.09■□□□□ 0.17
DDX39A-213ENST00000590315 GRAPQ13588 217 aa16.09■□□□□ 0.17
DDX39A-213ENST00000590315 CCDC57Q2TAC2 916 aa16.09■□□□□ 0.17
DDX39A-213ENST00000590315 ANKRD18AQ8IVF6 992 aa16.09■□□□□ 0.17
DDX39A-213ENST00000590315 GRAPLQ8TC17 118 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-213ENST00000590315 CRAMP1Q96RY5 1269 aa16.09■□□□□ 0.17
DDX39A-213ENST00000590315 CRBNQ96SW2 442 aa16.09■□□□□ 0.17
DDX39A-213ENST00000590315 CHD4Q14839 1912 aa16.08■□□□□ 0.16
DDX39A-213ENST00000590315 C21orf2O43822 256 aa16.08■□□□□ 0.16
DDX39A-213ENST00000590315 HOXA10P31260 410 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-213ENST00000590315 IGHMBP2P38935 993 aaKnown RBP16.08■□□□□ 0.16
DDX39A-213ENST00000590315 CELF1Q92879 486 aaKnown RBP16.08■□□□□ 0.16
DDX39A-213ENST00000590315 ANKRD44Q8N8A2 993 aa16.07■□□□□ 0.16
DDX39A-213ENST00000590315 KAZALD1Q96I82 304 aa16.07■□□□□ 0.16
DDX39A-213ENST00000590315 SBF1O95248 1867 aa16.07■□□□□ 0.16
DDX39A-213ENST00000590315 RTL9Q8NET4 1388 aa16.06■□□□□ 0.16
DDX39A-213ENST00000590315 ZBTB7BO15156 539 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-213ENST00000590315 CSF1RP07333 972 aa16.06■□□□□ 0.16
DDX39A-213ENST00000590315 MPHOSPH8Q99549 860 aa16.06■□□□□ 0.16
DDX39A-213ENST00000590315 YBX3P16989 372 aaKnown RBP eCLIP16.05■□□□□ 0.16
DDX39A-213ENST00000590315 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
DDX39A-213ENST00000590315 ARHGAP27Q6ZUM4 889 aa16.05■□□□□ 0.16
DDX39A-213ENST00000590315 ZNF594Q96JF6 807 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-213ENST00000590315 DICER1Q9UPY3 1922 aaKnown RBP16.05■□□□□ 0.16
DDX39A-213ENST00000590315 TIAM2Q8IVF5 1701 aa16.05■□□□□ 0.16
DDX39A-213ENST00000590315 SRGAP3O43295 1099 aa16.04■□□□□ 0.16
DDX39A-213ENST00000590315 BBOX1O75936 387 aa16.04■□□□□ 0.16
DDX39A-213ENST00000590315 RABL6Q3YEC7 729 aaPredicted RBP16.04■□□□□ 0.16
DDX39A-213ENST00000590315 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
DDX39A-213ENST00000590315 SOGA3Q5TF21 947 aa16.04■□□□□ 0.16
DDX39A-213ENST00000590315 OLFM4Q6UX06 510 aa16.04■□□□□ 0.16
DDX39A-213ENST00000590315 CNNM1Q9NRU3 951 aa16.04■□□□□ 0.16
DDX39A-213ENST00000590315 MYH13Q9UKX3 1938 aa16.04■□□□□ 0.16
DDX39A-213ENST00000590315 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
DDX39A-213ENST00000590315 KLHDC4Q8TBB5 520 aa16.03■□□□□ 0.16
DDX39A-213ENST00000590315 NEFLP07196 543 aa16.02■□□□□ 0.16
DDX39A-213ENST00000590315 SLC51AQ86UW1 340 aa16.02■□□□□ 0.16
DDX39A-213ENST00000590315 SIL1Q9H173 461 aa16.02■□□□□ 0.16
DDX39A-213ENST00000590315 ATP6V0A2Q9Y487 856 aa16.02■□□□□ 0.16
DDX39A-213ENST00000590315 GRIN3BO60391 1043 aa16.01■□□□□ 0.15
DDX39A-213ENST00000590315 LDHAL6AQ6ZMR3 332 aa16.01■□□□□ 0.15
DDX39A-213ENST00000590315 SP8Q8IXZ3 490 aa16.01■□□□□ 0.15
DDX39A-213ENST00000590315 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
DDX39A-213ENST00000590315 ANKIB1Q9P2G1 1089 aa16.01■□□□□ 0.15
DDX39A-213ENST00000590315 LTBP1Q14766 1721 aa16.01■□□□□ 0.15
DDX39A-213ENST00000590315 PNMA6EA0A0J9YXQ4 647 aa16■□□□□ 0.15
DDX39A-213ENST00000590315 RASSF7Q02833 373 aa16■□□□□ 0.15
DDX39A-213ENST00000590315 OS9Q13438 667 aaPredicted RBP16■□□□□ 0.15
DDX39A-213ENST00000590315 CC2D2BQ6DHV5 1058 aa16■□□□□ 0.15
DDX39A-213ENST00000590315 DPP8Q6V1X1 898 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms