RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 BBOX1O75936 387 aa17.83■□□□□ 0.44
SCAMP4-212ENST00000590266 TOMM70O94826 608 aa17.83■□□□□ 0.44
SCAMP4-212ENST00000590266 CCDC152Q4G0S7 254 aa17.83■□□□□ 0.44
SCAMP4-212ENST00000590266 BEND3Q5T5X7 828 aa17.83■□□□□ 0.44
SCAMP4-212ENST00000590266 CC2D2BQ6DHV5 1058 aa17.83■□□□□ 0.44
SCAMP4-212ENST00000590266 CELF1Q92879 486 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-212ENST00000590266 SEC31BQ9NQW1 1179 aa17.83■□□□□ 0.44
SCAMP4-212ENST00000590266 ATP6V0A2Q9Y487 856 aa17.83■□□□□ 0.44
SCAMP4-212ENST00000590266 CACNA1SQ13698 1873 aa17.83■□□□□ 0.44
SCAMP4-212ENST00000590266 CDHR2Q9BYE9 1310 aa17.82■□□□□ 0.44
SCAMP4-212ENST00000590266 CTSWP56202 376 aa17.82■□□□□ 0.44
SCAMP4-212ENST00000590266 H7C1W4 665 aa17.81■□□□□ 0.44
SCAMP4-212ENST00000590266 IARSP41252 1262 aaKnown RBP17.81■□□□□ 0.44
SCAMP4-212ENST00000590266 ALDH1L2Q3SY69 923 aa17.81■□□□□ 0.44
SCAMP4-212ENST00000590266 CT47B1P0C2W7 299 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-212ENST00000590266 DPP8Q6V1X1 898 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-212ENST00000590266 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
SCAMP4-212ENST00000590266 PSMD1Q99460 953 aa17.8■□□□□ 0.44
SCAMP4-212ENST00000590266 SRCIN1Q9C0H9 1055 aa17.8■□□□□ 0.44
SCAMP4-212ENST00000590266 DDX60Q8IY21 1712 aaKnown RBP17.8■□□□□ 0.44
SCAMP4-212ENST00000590266 PTPRCP08575 1304 aa17.79■□□□□ 0.44
SCAMP4-212ENST00000590266 RPS8P62241 208 aaKnown RBP17.79■□□□□ 0.44
SCAMP4-212ENST00000590266 MPNDQ8N594 471 aa17.79■□□□□ 0.44
SCAMP4-212ENST00000590266 C9orf78Q9NZ63 289 aaPredicted RBP17.79■□□□□ 0.44
SCAMP4-212ENST00000590266 ZC3H4Q9UPT8 1303 aaKnown RBP17.78■□□□□ 0.44
SCAMP4-212ENST00000590266 GRIPAP1Q4V328 841 aa17.78■□□□□ 0.44
SCAMP4-212ENST00000590266 DPY19L2Q6NUT2 758 aa17.78■□□□□ 0.44
SCAMP4-212ENST00000590266 TMC4Q7Z404 712 aa17.78■□□□□ 0.44
SCAMP4-212ENST00000590266 LARGE2Q8N3Y3 721 aa17.78■□□□□ 0.44
SCAMP4-212ENST00000590266 GREM2Q9H772 168 aa17.78■□□□□ 0.44
SCAMP4-212ENST00000590266 RRAGCQ9HB90 399 aa17.78■□□□□ 0.44
SCAMP4-212ENST00000590266 LAMB2P55268 1798 aa17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 GLTPD2A6NH11 291 aa17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 PPIP5K2O43314 1243 aa17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 RARSP54136 660 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 AOC3Q16853 763 aa17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 ANKRD18AQ8IVF6 992 aa17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 TTLL11Q8NHH1 800 aa17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 JDP2Q8WYK2 163 aa17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 NOB1Q9ULX3 412 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 NSFL1CQ9UNZ2 370 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 CHMP3Q9Y3E7 222 aa17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 SNED1Q8TER0 1413 aa17.77■□□□□ 0.44
SCAMP4-212ENST00000590266 ZBED9Q6R2W3 1325 aa17.76■□□□□ 0.43
SCAMP4-212ENST00000590266 GRM8O00222 908 aa17.76■□□□□ 0.43
SCAMP4-212ENST00000590266 ALDH1L1O75891 902 aa17.76■□□□□ 0.43
SCAMP4-212ENST00000590266 APLP1P51693 650 aa17.76■□□□□ 0.43
SCAMP4-212ENST00000590266 CASP7P55210 303 aa17.76■□□□□ 0.43
SCAMP4-212ENST00000590266 SUPT20HQ8NEM7 779 aa17.76■□□□□ 0.43
SCAMP4-212ENST00000590266 RBM46Q8TBY0 533 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-212ENST00000590266 CDC5LQ99459 802 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-212ENST00000590266 COL4A1P02462 1669 aa17.75■□□□□ 0.43
SCAMP4-212ENST00000590266 DDNO94850 711 aaPredicted RBP17.75■□□□□ 0.43
SCAMP4-212ENST00000590266 GPSM2P81274 684 aa17.75■□□□□ 0.43
SCAMP4-212ENST00000590266 FAM161AQ3B820 660 aa17.75■□□□□ 0.43
SCAMP4-212ENST00000590266 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
SCAMP4-212ENST00000590266 ZNF541Q9H0D2 1346 aa17.74■□□□□ 0.43
SCAMP4-212ENST00000590266 C6orf229H3BNL8 230 aa17.74■□□□□ 0.43
SCAMP4-212ENST00000590266 ITGA6P23229 1130 aa17.74■□□□□ 0.43
SCAMP4-212ENST00000590266 NIM1KQ8IY84 436 aa17.74■□□□□ 0.43
SCAMP4-212ENST00000590266 ANKIB1Q9P2G1 1089 aa17.74■□□□□ 0.43
SCAMP4-212ENST00000590266 TIAM2Q8IVF5 1701 aa17.74■□□□□ 0.43
SCAMP4-212ENST00000590266 FRAT1Q92837 279 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-212ENST00000590266 GPR101Q96P66 508 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-212ENST00000590266 PLA2G12BQ9BX93 195 aa17.73■□□□□ 0.43
SCAMP4-212ENST00000590266 RIMBP2O15034 1052 aa17.72■□□□□ 0.43
SCAMP4-212ENST00000590266 BCAR3O75815 825 aa17.72■□□□□ 0.43
SCAMP4-212ENST00000590266 IGHMBP2P38935 993 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-212ENST00000590266 EIF6P56537 245 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-212ENST00000590266 FSTL1Q12841 308 aa17.72■□□□□ 0.43
SCAMP4-212ENST00000590266 LMBR1LQ6UX01 489 aa17.72■□□□□ 0.43
SCAMP4-212ENST00000590266 RTFDC1Q9BY42 306 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-212ENST00000590266 GJA3Q9Y6H8 435 aa17.72■□□□□ 0.43
SCAMP4-212ENST00000590266 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
SCAMP4-212ENST00000590266 UFL1O94874 794 aa17.71■□□□□ 0.43
SCAMP4-212ENST00000590266 NBPF7P0C2Y1 421 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-212ENST00000590266 VEGFAP15692 232 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-212ENST00000590266 FOXO4P98177 505 aa17.71■□□□□ 0.43
SCAMP4-212ENST00000590266 WASHC4Q2M389 1173 aa17.71■□□□□ 0.43
SCAMP4-212ENST00000590266 EPHA10Q5JZY3 1008 aa17.71■□□□□ 0.43
SCAMP4-212ENST00000590266 SUCLG2Q96I99 432 aa17.71■□□□□ 0.43
SCAMP4-212ENST00000590266 API5Q9BZZ5 524 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-212ENST00000590266 SBF1O95248 1867 aa17.71■□□□□ 0.43
SCAMP4-212ENST00000590266 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 FZD9O00144 591 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 CSF1RP07333 972 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 KIAA2012Q0VF49 1180 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 TAF7LQ5H9L4 462 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 SMC1BQ8NDV3 1235 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 MPHOSPH8Q99549 860 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 POLLQ9UGP5 575 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 CEP350Q5VT06 3117 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 COL4A5P29400 1685 aa17.7■□□□□ 0.42
SCAMP4-212ENST00000590266 IFIT5Q13325 482 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-212ENST00000590266 TBC1D16Q8TBP0 767 aa17.69■□□□□ 0.42
SCAMP4-212ENST00000590266 EYA3Q99504 573 aa17.69■□□□□ 0.42
SCAMP4-212ENST00000590266 BSDC1Q9NW68 430 aaPredicted RBP17.69■□□□□ 0.42
SCAMP4-212ENST00000590266 GGA1Q9UJY5 639 aa17.69■□□□□ 0.42
SCAMP4-212ENST00000590266 G3V3G9 751 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms