RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 TMCO5BA8MYB1 307 aa16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 KRT86O43790 486 aa16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 TAF7Q15545 349 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 ATL3Q6DD88 541 aa16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 SPATA24Q86W54 205 aa16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 RLBP1P12271 317 aa16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 LMOD1P29536 600 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 ZNF75DP51815 510 aa16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 STMN4Q9H169 189 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 ZMYM3Q14202 1370 aa16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 AKR1B10O60218 316 aa16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 TSHZ3Q63HK5 1081 aa16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 DRC1Q96MC2 740 aa16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 PUF60Q9UHX1 559 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-214ENST00000589677 IDH1O75874 414 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 AMPD3Q01432 767 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 UBE4AQ14139 1066 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 ANKRD24Q8TF21 1146 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 MRPL50Q8N5N7 158 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 SCLT1Q96NL6 688 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 CPSF2Q9P2I0 782 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 IMPACTQ9P2X3 320 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 RHOXF2BP0C7M4 288 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 AK2P54819 239 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 ZNF569Q5MCW4 686 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 CCDC50Q8IVM0 306 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 FBF1Q8TES7 1133 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 RHOXF2Q9BQY4 288 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 ADGRL1O94910 1474 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 POTEJP0CG39 1038 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 TATP17735 454 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 INPP5BP32019 993 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 CCDC6Q16204 474 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 BRF1Q92994 677 aa16.7■□□□□ 0.26
SMARCA4-214ENST00000589677 TRIM21P19474 475 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 KIF5BP33176 963 aa16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 RAB34Q9BZG1 259 aa16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 CCDC96Q2M329 555 aa16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 UTP14AQ9BVJ6 771 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 RBM8AQ9Y5S9 174 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 POLR3AO14802 1390 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 BMP15O95972 392 aa16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 PPP1R42Q7Z4L9 355 aa16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 INSRP06213 1382 aa16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 C17orf53Q8N3J3 647 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 DDX12PQ92771 950 aa16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 POGZQ7Z3K3 1410 aa16.69■□□□□ 0.26
SMARCA4-214ENST00000589677 NAA25Q14CX7 972 aa16.68■□□□□ 0.26
SMARCA4-214ENST00000589677 SARNPP82979 210 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-214ENST00000589677 BAG1Q99933 345 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-214ENST00000589677 NAPBQ9H115 298 aa16.68■□□□□ 0.26
SMARCA4-214ENST00000589677 VAV2P52735 878 aa16.68■□□□□ 0.26
SMARCA4-214ENST00000589677 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-214ENST00000589677 ZEB2O60315 1214 aa16.68■□□□□ 0.26
SMARCA4-214ENST00000589677 SSR1P43307 286 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-214ENST00000589677 KARSQ15046 597 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-214ENST00000589677 SELENOOQ9BVL4 669 aa16.68■□□□□ 0.26
SMARCA4-214ENST00000589677 SPTLC2O15270 562 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 KIF4AO95239 1232 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 RNF41Q9H4P4 317 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 OAS2P29728 719 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 ZSCAN26Q16670 478 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 TTC14Q96N46 770 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 PIK3C2GO75747 1445 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 NOP2P46087 812 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 CPLX4Q7Z7G2 160 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 NCOA7Q8NI08 942 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 MYCBPQ99417 103 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 IFIT3O14879 490 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 STAMBPO95630 424 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 METAP2P50579 478 aaKnown RBP eCLIP16.67■□□□□ 0.269e-7■■□□□ 12.7
SMARCA4-214ENST00000589677 KIF5AQ12840 1032 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 CEP63Q96MT8 703 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 LZTFL1Q9NQ48 299 aa16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-214ENST00000589677 ARHGAP25P42331 645 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 KIAA0753Q2KHM9 967 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 C16orf71Q8IYS4 520 aaPredicted RBP16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 TRIM47Q96LD4 638 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 CLSTN2Q9H4D0 955 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 ANKRD36BQ8N2N9 1353 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 RRAGBQ5VZM2 374 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 ATP8B2P98198 1209 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 MEIS3Q99687 375 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 MAP2K2P36507 400 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 CABP4P57796 275 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 CHMP4BP1P59074 171 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 CNGA4Q8IV77 575 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 CARD6Q9BX69 1037 aa16.66■□□□□ 0.26
SMARCA4-214ENST00000589677 A0A087WZG4 1122 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 TMEM266Q2M3C6 531 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 LRP2BPQ9P2M1 347 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 PIK3R4Q99570 1358 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 CLGNO14967 610 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 CFAP58Q5T655 872 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 MYL5Q02045 173 aa16.65■□□□□ 0.26
SMARCA4-214ENST00000589677 HOOK3Q86VS8 718 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms