RNA–Protein interactions for RNA: ENST00000588909.1

TPGS2-208, Transcript of tubulin polyglutamylase complex subunit 2, human

TSL 5

Gene TPGS2, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPGS2-208	ENST00000588909	GJA3	Q9Y6H8	435 aa		33.16	■■■□□ 2.9
TPGS2-208	ENST00000588909	PI4KAP2	A4QPH2	592 aa		33.15	■■■□□ 2.9
TPGS2-208	ENST00000588909	PPIP5K2	O43314	1243 aa		33.15	■■■□□ 2.9
TPGS2-208	ENST00000588909	WDR63	Q8IWG1	891 aa		33.15	■■■□□ 2.9
TPGS2-208	ENST00000588909	PI4KAP1	Q8N8J0	262 aa		33.15	■■■□□ 2.9
TPGS2-208	ENST00000588909	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	33.15	■■■□□ 2.9
TPGS2-208	ENST00000588909	CELF1	Q92879	486 aa	Known RBP	33.15	■■■□□ 2.9
TPGS2-208	ENST00000588909	COL4A1	P02462	1669 aa		33.14	■■■□□ 2.9
TPGS2-208	ENST00000588909	SLC4A2	P04920	1241 aa		33.14	■■■□□ 2.9
TPGS2-208	ENST00000588909	SF3B3	Q15393	1217 aa	Known RBP	33.14	■■■□□ 2.9
TPGS2-208	ENST00000588909	DPP8	Q6V1X1	898 aa	Predicted RBP	33.14	■■■□□ 2.9
TPGS2-208	ENST00000588909	EXOSC9	Q06265	439 aa	Known RBP	33.13	■■■□□ 2.89
TPGS2-208	ENST00000588909	MPND	Q8N594	471 aa		33.13	■■■□□ 2.89
TPGS2-208	ENST00000588909	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.13	■■■□□ 2.89
TPGS2-208	ENST00000588909	CWC25	Q9NXE8	425 aa	Predicted RBP	33.13	■■■□□ 2.89
TPGS2-208	ENST00000588909	IQCA1L	A6NCM1	817 aa		33.12	■■■□□ 2.89
TPGS2-208	ENST00000588909	EIF6	P56537	245 aa	Known RBP	33.12	■■■□□ 2.89
TPGS2-208	ENST00000588909	KSR2	Q6VAB6	950 aa		33.12	■■■□□ 2.89
TPGS2-208	ENST00000588909	CCDC191	Q8NCU4	936 aa		33.12	■■■□□ 2.89
TPGS2-208	ENST00000588909	EAPP	Q56P03	285 aa	Predicted RBP	33.11	■■■□□ 2.89
TPGS2-208	ENST00000588909	NIM1K	Q8IY84	436 aa		33.11	■■■□□ 2.89
TPGS2-208	ENST00000588909	DNAJC5G	Q8N7S2	189 aa		33.11	■■■□□ 2.89
TPGS2-208	ENST00000588909	GPC2	Q8N158	579 aa		33.1	■■■□□ 2.89
TPGS2-208	ENST00000588909	CCDC85A	Q96PX6	553 aa	Predicted RBP	33.1	■■■□□ 2.89
TPGS2-208	ENST00000588909	HACL1	Q9UJ83	578 aa		33.1	■■■□□ 2.89
TPGS2-208	ENST00000588909	PCCA	P05165	728 aa	Predicted RBP	33.09	■■■□□ 2.89
TPGS2-208	ENST00000588909	IGKV5-2	P06315	115 aa		33.09	■■■□□ 2.89
TPGS2-208	ENST00000588909	CHADL	Q6NUI6	762 aa		33.09	■■■□□ 2.89
TPGS2-208	ENST00000588909	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.09	■■■□□ 2.89
TPGS2-208	ENST00000588909	CWF19L2	Q2TBE0	894 aa	Known RBP	33.08	■■■□□ 2.89
TPGS2-208	ENST00000588909	SEC31B	Q9NQW1	1179 aa		33.08	■■■□□ 2.89
TPGS2-208	ENST00000588909	VAMP4	O75379	141 aa		33.07	■■■□□ 2.88
TPGS2-208	ENST00000588909	SUPT20H	Q8NEM7	779 aa		33.07	■■■□□ 2.88
TPGS2-208	ENST00000588909	EPHX2	P34913	555 aa		33.06	■■■□□ 2.88
TPGS2-208	ENST00000588909	FLII	Q13045	1269 aa		33.05	■■■□□ 2.88
TPGS2-208	ENST00000588909	SCN4A	P35499	1836 aa		33.05	■■■□□ 2.88
TPGS2-208	ENST00000588909	TMC4	Q7Z404	712 aa		33.04	■■■□□ 2.88
TPGS2-208	ENST00000588909	NSFL1C	Q9UNZ2	370 aa	Known RBP	33.04	■■■□□ 2.88
TPGS2-208	ENST00000588909	CLEC11A	Q9Y240	323 aa		33.04	■■■□□ 2.88
TPGS2-208	ENST00000588909	NEXN	Q0ZGT2	675 aa		33.03	■■■□□ 2.88
TPGS2-208	ENST00000588909	LDHD	Q86WU2	507 aa		33.03	■■■□□ 2.88
TPGS2-208	ENST00000588909	DUOX1	Q9NRD9	1551 aa		33.03	■■■□□ 2.88
TPGS2-208	ENST00000588909	PDE8A	O60658	829 aa		33.02	■■■□□ 2.88
TPGS2-208	ENST00000588909	RPS8	P62241	208 aa	Known RBP	33.02	■■■□□ 2.88
TPGS2-208	ENST00000588909	GPSM2	P81274	684 aa		33.02	■■■□□ 2.88
TPGS2-208	ENST00000588909	KIAA2012	Q0VF49	1180 aa		33.02	■■■□□ 2.88
TPGS2-208	ENST00000588909	FKBP5	Q13451	457 aa	Predicted RBP	33.02	■■■□□ 2.88
TPGS2-208	ENST00000588909	NEURL1B	A8MQ27	555 aa		33.01	■■■□□ 2.87
TPGS2-208	ENST00000588909	SCNN1D	P51172	638 aa		33.01	■■■□□ 2.87
TPGS2-208	ENST00000588909	VPS33B	Q9H267	617 aa		33.01	■■■□□ 2.87
TPGS2-208	ENST00000588909	ZNRF3	Q9ULT6	936 aa		33.01	■■■□□ 2.87
TPGS2-208	ENST00000588909	LRRC37A	A6NMS7	1700 aa		33.01	■■■□□ 2.87
TPGS2-208	ENST00000588909	EPS15	P42566	896 aa		33	■■■□□ 2.87
TPGS2-208	ENST00000588909	CXCL9	Q07325	125 aa		33	■■■□□ 2.87
TPGS2-208	ENST00000588909	CCDC152	Q4G0S7	254 aa		33	■■■□□ 2.87
TPGS2-208	ENST00000588909	GPR101	Q96P66	508 aa	Predicted RBP	33	■■■□□ 2.87
TPGS2-208	ENST00000588909	MYH16	Q9H6N6	1097 aa		33	■■■□□ 2.87
TPGS2-208	ENST00000588909	LTBP1	Q14766	1721 aa		32.99	■■■□□ 2.87
TPGS2-208	ENST00000588909	RIMBP2	O15034	1052 aa		32.99	■■■□□ 2.87
TPGS2-208	ENST00000588909	HSP90B1	P14625	803 aa	Known RBP	32.99	■■■□□ 2.87
TPGS2-208	ENST00000588909	KLRG1	Q96E93	195 aa		32.99	■■■□□ 2.87
TPGS2-208	ENST00000588909	C6orf229	H3BNL8	230 aa		32.98	■■■□□ 2.87
TPGS2-208	ENST00000588909	RAD17	O75943	681 aa		32.98	■■■□□ 2.87
TPGS2-208	ENST00000588909	LMOD1	P29536	600 aa	Predicted RBP	32.98	■■■□□ 2.87
TPGS2-208	ENST00000588909	POLL	Q9UGP5	575 aa		32.98	■■■□□ 2.87
TPGS2-208	ENST00000588909	CDHR2	Q9BYE9	1310 aa		32.97	■■■□□ 2.87
TPGS2-208	ENST00000588909	MAP1S	Q66K74	1059 aa	Predicted RBP	32.96	■■■□□ 2.87
TPGS2-208	ENST00000588909	UBE3B	Q7Z3V4	1068 aa		32.96	■■■□□ 2.87
TPGS2-208	ENST00000588909	DNAAF4	Q8WXU2	420 aa		32.96	■■■□□ 2.87
TPGS2-208	ENST00000588909	YDJC	A8MPS7	323 aa		32.95	■■■□□ 2.87
TPGS2-208	ENST00000588909	CTSW	P56202	376 aa		32.95	■■■□□ 2.87
TPGS2-208	ENST00000588909	WASHC4	Q2M389	1173 aa		32.95	■■■□□ 2.87
TPGS2-208	ENST00000588909	PNMA8A	Q86V59	439 aa	Predicted RBP	32.95	■■■□□ 2.87
TPGS2-208	ENST00000588909	DBNDD1	Q9H9R9	158 aa		32.94	■■■□□ 2.86
TPGS2-208	ENST00000588909	ZNF521	Q96K83	1311 aa		32.94	■■■□□ 2.86
TPGS2-208	ENST00000588909		F6X3S4	739 aa		32.93	■■■□□ 2.86
TPGS2-208	ENST00000588909	GMPS	P49915	693 aa	Predicted RBP	32.93	■■■□□ 2.86
TPGS2-208	ENST00000588909	CIAPIN1	Q6FI81	312 aa		32.93	■■■□□ 2.86
TPGS2-208	ENST00000588909	ADAMTSL1	Q8N6G6	1762 aa		32.92	■■■□□ 2.86
TPGS2-208	ENST00000588909	GCKR	Q14397	625 aa		32.92	■■■□□ 2.86
TPGS2-208	ENST00000588909	DOK7	Q18PE1	504 aa		32.92	■■■□□ 2.86
TPGS2-208	ENST00000588909	TTLL11	Q8NHH1	800 aa		32.92	■■■□□ 2.86
TPGS2-208	ENST00000588909	TBC1D16	Q8TBP0	767 aa		32.92	■■■□□ 2.86
TPGS2-208	ENST00000588909	GREM2	Q9H772	168 aa		32.92	■■■□□ 2.86
TPGS2-208	ENST00000588909	PCNT	O95613	3336 aa		32.92	■■■□□ 2.86
TPGS2-208	ENST00000588909		H7C1W4	665 aa		32.91	■■■□□ 2.86
TPGS2-208	ENST00000588909	ANKRD18A	Q8IVF6	992 aa		32.91	■■■□□ 2.86
TPGS2-208	ENST00000588909	ANKIB1	Q9P2G1	1089 aa		32.91	■■■□□ 2.86
TPGS2-208	ENST00000588909	ITGBL1	O95965	494 aa	Predicted RBP	32.9	■■■□□ 2.86
TPGS2-208	ENST00000588909	PASK	Q96RG2	1323 aa		32.9	■■■□□ 2.86
TPGS2-208	ENST00000588909	UFL1	O94874	794 aa		32.89	■■■□□ 2.86
TPGS2-208	ENST00000588909	CNTROB	Q8N137	903 aa		32.89	■■■□□ 2.86
TPGS2-208	ENST00000588909	GPRC5D	Q9NZD1	345 aa		32.89	■■■□□ 2.86
TPGS2-208	ENST00000588909	LINS1	Q8NG48	757 aa		32.88	■■■□□ 2.85
TPGS2-208	ENST00000588909	BCL2L13	Q9BXK5	485 aa		32.88	■■■□□ 2.85
TPGS2-208	ENST00000588909	KCNQ5	Q9NR82	932 aa		32.88	■■■□□ 2.85
TPGS2-208	ENST00000588909	TNIP1	Q15025	636 aa		32.87	■■■□□ 2.85
TPGS2-208	ENST00000588909	EYA3	Q99504	573 aa		32.87	■■■□□ 2.85
TPGS2-208	ENST00000588909	SHTN1	A0MZ66	631 aa		32.86	■■■□□ 2.85
TPGS2-208	ENST00000588909	ECE2	O60344	883 aa		32.86	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms