RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 DDX46Q7L014 1031 aaKnown RBP24.49■■□□□ 1.51
CIRBP-217ENST00000588230 DNAAF4Q8WXU2 420 aa24.49■■□□□ 1.51
CIRBP-217ENST00000588230 VEGFAP15692 232 aaPredicted RBP24.48■■□□□ 1.51
CIRBP-217ENST00000588230 TAF1P21675 1872 aa24.48■■□□□ 1.51
CIRBP-217ENST00000588230 DPY19L2Q6NUT2 758 aa24.48■■□□□ 1.51
CIRBP-217ENST00000588230 ZNF541Q9H0D2 1346 aa24.48■■□□□ 1.51
CIRBP-217ENST00000588230 ATP6V0A2Q9Y487 856 aa24.48■■□□□ 1.51
CIRBP-217ENST00000588230 DDNO94850 711 aaPredicted RBP24.47■■□□□ 1.51
CIRBP-217ENST00000588230 SF3B3Q15393 1217 aaKnown RBP24.47■■□□□ 1.51
CIRBP-217ENST00000588230 CWF19L2Q2TBE0 894 aaKnown RBP24.47■■□□□ 1.51
CIRBP-217ENST00000588230 TRMT2AQ8IZ69 625 aaKnown RBP24.47■■□□□ 1.51
CIRBP-217ENST00000588230 JARID2Q92833 1246 aaPredicted RBP24.47■■□□□ 1.51
CIRBP-217ENST00000588230 TMX4Q9H1E5 349 aaPredicted RBP24.47■■□□□ 1.51
CIRBP-217ENST00000588230 NEURL1BA8MQ27 555 aa24.46■■□□□ 1.51
CIRBP-217ENST00000588230 C16orf71Q8IYS4 520 aaPredicted RBP24.46■■□□□ 1.51
CIRBP-217ENST00000588230 LRRC37AA6NMS7 1700 aa24.46■■□□□ 1.51
CIRBP-217ENST00000588230 FZD9O00144 591 aa24.45■■□□□ 1.5
CIRBP-217ENST00000588230 BBOX1O75936 387 aa24.45■■□□□ 1.5
CIRBP-217ENST00000588230 HNRNPUQ00839 825 aaKnown RBP eCLIP24.45■■□□□ 1.5
CIRBP-217ENST00000588230 FSTL1Q12841 308 aa24.45■■□□□ 1.5
CIRBP-217ENST00000588230 GRIPAP1Q4V328 841 aa24.45■■□□□ 1.5
CIRBP-217ENST00000588230 L3MBTL3Q96JM7 780 aaPredicted RBP24.45■■□□□ 1.5
CIRBP-217ENST00000588230 F6X3S4 739 aa24.44■■□□□ 1.5
CIRBP-217ENST00000588230 GRAPQ13588 217 aa24.44■■□□□ 1.5
CIRBP-217ENST00000588230 LINS1Q8NG48 757 aa24.44■■□□□ 1.5
CIRBP-217ENST00000588230 GRAPLQ8TC17 118 aaPredicted RBP24.44■■□□□ 1.5
CIRBP-217ENST00000588230 DUOX1Q9NRD9 1551 aa24.43■■□□□ 1.5
CIRBP-217ENST00000588230 PDE8AO60658 829 aa24.42■■□□□ 1.5
CIRBP-217ENST00000588230 GCKRQ14397 625 aa24.42■■□□□ 1.5
CIRBP-217ENST00000588230 SP8Q8IXZ3 490 aa24.42■■□□□ 1.5
CIRBP-217ENST00000588230 MRPL50Q8N5N7 158 aaKnown RBP24.42■■□□□ 1.5
CIRBP-217ENST00000588230 SSH1Q8WYL5 1049 aa24.42■■□□□ 1.5
CIRBP-217ENST00000588230 RTFDC1Q9BY42 306 aaPredicted RBP24.42■■□□□ 1.5
CIRBP-217ENST00000588230 CDHR2Q9BYE9 1310 aa24.41■■□□□ 1.5
CIRBP-217ENST00000588230 SMC1BQ8NDV3 1235 aa24.41■■□□□ 1.5
CIRBP-217ENST00000588230 CT47B1P0C2W7 299 aaPredicted RBP24.4■■□□□ 1.5
CIRBP-217ENST00000588230 UBE3BQ7Z3V4 1068 aa24.4■■□□□ 1.5
CIRBP-217ENST00000588230 CELF1Q92879 486 aaKnown RBP24.4■■□□□ 1.5
CIRBP-217ENST00000588230 SCN4AP35499 1836 aa24.4■■□□□ 1.5
CIRBP-217ENST00000588230 H7C1W4 665 aa24.39■■□□□ 1.49
CIRBP-217ENST00000588230 APLP1P51693 650 aa24.39■■□□□ 1.49
CIRBP-217ENST00000588230 ALDH1L2Q3SY69 923 aa24.39■■□□□ 1.49
CIRBP-217ENST00000588230 CCDC152Q4G0S7 254 aa24.39■■□□□ 1.49
CIRBP-217ENST00000588230 TMC4Q7Z404 712 aa24.39■■□□□ 1.49
CIRBP-217ENST00000588230 BCL2L13Q9BXK5 485 aa24.39■■□□□ 1.49
CIRBP-217ENST00000588230 LTBP1Q14766 1721 aa24.38■■□□□ 1.49
CIRBP-217ENST00000588230 POTEIP0CG38 1075 aa24.38■■□□□ 1.49
CIRBP-217ENST00000588230 POTEJP0CG39 1038 aa24.38■■□□□ 1.49
CIRBP-217ENST00000588230 BEND3Q5T5X7 828 aa24.38■■□□□ 1.49
CIRBP-217ENST00000588230 SLC4A10Q6U841 1118 aa24.38■■□□□ 1.49
CIRBP-217ENST00000588230 LARGE2Q8N3Y3 721 aa24.37■■□□□ 1.49
CIRBP-217ENST00000588230 JDP2Q8WYK2 163 aa24.37■■□□□ 1.49
CIRBP-217ENST00000588230 CCDC85AQ96PX6 553 aaPredicted RBP24.37■■□□□ 1.49
CIRBP-217ENST00000588230 SMC4Q9NTJ3 1288 aa24.37■■□□□ 1.49
CIRBP-217ENST00000588230 CTSWP56202 376 aa24.36■■□□□ 1.49
CIRBP-217ENST00000588230 RPS8P62241 208 aaKnown RBP24.36■■□□□ 1.49
CIRBP-217ENST00000588230 AOC3Q16853 763 aa24.36■■□□□ 1.49
CIRBP-217ENST00000588230 MPNDQ8N594 471 aa24.36■■□□□ 1.49
CIRBP-217ENST00000588230 PTPRCP08575 1304 aa24.35■■□□□ 1.49
CIRBP-217ENST00000588230 ADAMTSL1Q8N6G6 1762 aa24.35■■□□□ 1.49
CIRBP-217ENST00000588230 DPP8Q6V1X1 898 aaPredicted RBP24.35■■□□□ 1.49
CIRBP-217ENST00000588230 GPC2Q8N158 579 aa24.35■■□□□ 1.49
CIRBP-217ENST00000588230 VPS33BQ9H267 617 aa24.35■■□□□ 1.49
CIRBP-217ENST00000588230 TAF1DQ9H5J8 278 aaPredicted RBP24.35■■□□□ 1.49
CIRBP-217ENST00000588230 SEC31BQ9NQW1 1179 aa24.35■■□□□ 1.49
CIRBP-217ENST00000588230 IQCA1LA6NCM1 817 aa24.34■■□□□ 1.49
CIRBP-217ENST00000588230 PPIP5K2O43314 1243 aa24.34■■□□□ 1.49
CIRBP-217ENST00000588230 DNAJC5GQ8N7S2 189 aa24.34■■□□□ 1.49
CIRBP-217ENST00000588230 SRCIN1Q9C0H9 1055 aa24.34■■□□□ 1.49
CIRBP-217ENST00000588230 ALDH1L1O75891 902 aa24.33■■□□□ 1.49
CIRBP-217ENST00000588230 HTRA3P83110 453 aa24.33■■□□□ 1.49
CIRBP-217ENST00000588230 SUPT20HQ8NEM7 779 aa24.33■■□□□ 1.49
CIRBP-217ENST00000588230 TTLL11Q8NHH1 800 aa24.33■■□□□ 1.49
CIRBP-217ENST00000588230 CASP7P55210 303 aa24.32■■□□□ 1.48
CIRBP-217ENST00000588230 KIAA2012Q0VF49 1180 aa24.32■■□□□ 1.48
CIRBP-217ENST00000588230 PLA2G12BQ9BX93 195 aa24.32■■□□□ 1.48
CIRBP-217ENST00000588230 C9orf78Q9NZ63 289 aaPredicted RBP24.32■■□□□ 1.48
CIRBP-217ENST00000588230 EIF6P56537 245 aaKnown RBP24.31■■□□□ 1.48
CIRBP-217ENST00000588230 NIM1KQ8IY84 436 aa24.31■■□□□ 1.48
CIRBP-217ENST00000588230 GRM8O00222 908 aa24.3■■□□□ 1.48
CIRBP-217ENST00000588230 CHADLQ6NUI6 762 aa24.3■■□□□ 1.48
CIRBP-217ENST00000588230 ANKRD18AQ8IVF6 992 aa24.3■■□□□ 1.48
CIRBP-217ENST00000588230 CDC5LQ99459 802 aaKnown RBP24.3■■□□□ 1.48
CIRBP-217ENST00000588230 HACL1Q9UJ83 578 aa24.3■■□□□ 1.48
CIRBP-217ENST00000588230 NSFL1CQ9UNZ2 370 aaKnown RBP24.3■■□□□ 1.48
CIRBP-217ENST00000588230 MYH3P11055 1940 aa24.29■■□□□ 1.48
CIRBP-217ENST00000588230 SCNN1DP51172 638 aa24.29■■□□□ 1.48
CIRBP-217ENST00000588230 GPSM2P81274 684 aa24.29■■□□□ 1.48
CIRBP-217ENST00000588230 GREM2Q9H772 168 aa24.29■■□□□ 1.48
CIRBP-217ENST00000588230 EPHX2P34913 555 aa24.28■■□□□ 1.48
CIRBP-217ENST00000588230 RARSP54136 660 aaKnown RBP24.28■■□□□ 1.48
CIRBP-217ENST00000588230 LDHDQ86WU2 507 aa24.28■■□□□ 1.48
CIRBP-217ENST00000588230 POLLQ9UGP5 575 aa24.28■■□□□ 1.48
CIRBP-217ENST00000588230 ZNRF3Q9ULT6 936 aa24.28■■□□□ 1.48
CIRBP-217ENST00000588230 ZBED9Q6R2W3 1325 aa24.28■■□□□ 1.48
CIRBP-217ENST00000588230 CXCL9Q07325 125 aa24.27■■□□□ 1.48
CIRBP-217ENST00000588230 GJA3Q9Y6H8 435 aa24.27■■□□□ 1.48
CIRBP-217ENST00000588230 RTL9Q8NET4 1388 aa24.27■■□□□ 1.48
CIRBP-217ENST00000588230 YDJCA8MPS7 323 aa24.26■■□□□ 1.47
CIRBP-217ENST00000588230 BRPF1P55201 1214 aaPredicted RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms