RNA–Protein interactions for RNA: ENST00000586835.1

TMED1-202, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2

Gene TMED1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-202ENST00000586835 DCTPP1Q9H773 170 aa17.4■□□□□ 0.38
TMED1-202ENST00000586835 CWF19L2Q2TBE0 894 aaKnown RBP17.39■□□□□ 0.37
TMED1-202ENST00000586835 TTLL6Q8N841 843 aa17.39■□□□□ 0.37
TMED1-202ENST00000586835 CWC25Q9NXE8 425 aaPredicted RBP17.39■□□□□ 0.37
TMED1-202ENST00000586835 KLRG2A4D1S0 409 aaPredicted RBP17.38■□□□□ 0.37
TMED1-202ENST00000586835 H7C1W4 665 aa17.38■□□□□ 0.37
TMED1-202ENST00000586835 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
TMED1-202ENST00000586835 SRGNP10124 158 aa17.38■□□□□ 0.37
TMED1-202ENST00000586835 GTF2E1P29083 439 aaPredicted RBP17.38■□□□□ 0.37
TMED1-202ENST00000586835 PARP10Q53GL7 1025 aa17.38■□□□□ 0.37
TMED1-202ENST00000586835 SUSD4Q5VX71 490 aa17.38■□□□□ 0.37
TMED1-202ENST00000586835 ARHGAP27Q6ZUM4 889 aa17.38■□□□□ 0.37
TMED1-202ENST00000586835 ZNF622Q969S3 477 aaKnown RBP eCLIP17.38■□□□□ 0.37
TMED1-202ENST00000586835 LRRFIP2Q9Y608 721 aaKnown RBP17.38■□□□□ 0.37
TMED1-202ENST00000586835 COL11A2P13942 1736 aaPredicted RBP17.38■□□□□ 0.37
TMED1-202ENST00000586835 STYK1Q6J9G0 422 aa17.37■□□□□ 0.37
TMED1-202ENST00000586835 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
TMED1-202ENST00000586835 SSH3Q8TE77 659 aa17.37■□□□□ 0.37
TMED1-202ENST00000586835 C1orf115Q9H7X2 142 aa17.37■□□□□ 0.37
TMED1-202ENST00000586835 NTSR2O95665 410 aa17.36■□□□□ 0.37
TMED1-202ENST00000586835 ERFEQ4G0M1 354 aa17.36■□□□□ 0.37
TMED1-202ENST00000586835 PPP1R42Q7Z4L9 355 aa17.36■□□□□ 0.37
TMED1-202ENST00000586835 MASTLQ96GX5 879 aa17.36■□□□□ 0.37
TMED1-202ENST00000586835 CASP7P55210 303 aa17.35■□□□□ 0.37
TMED1-202ENST00000586835 POLA2Q14181 598 aa17.35■□□□□ 0.37
TMED1-202ENST00000586835 NLRP10Q86W26 655 aa17.35■□□□□ 0.37
TMED1-202ENST00000586835 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
TMED1-202ENST00000586835 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
TMED1-202ENST00000586835 ABCC12Q96J65 1359 aa17.35■□□□□ 0.37
TMED1-202ENST00000586835 PCCAP05165 728 aaPredicted RBP17.34■□□□□ 0.37
TMED1-202ENST00000586835 NPR1P16066 1061 aa17.34■□□□□ 0.37
TMED1-202ENST00000586835 NUCB1Q02818 461 aa17.34■□□□□ 0.37
TMED1-202ENST00000586835 RABL6Q3YEC7 729 aaPredicted RBP17.34■□□□□ 0.37
TMED1-202ENST00000586835 UTP14AQ9BVJ6 771 aaKnown RBP17.34■□□□□ 0.37
TMED1-202ENST00000586835 CDHR2Q9BYE9 1310 aa17.34■□□□□ 0.37
TMED1-202ENST00000586835 RIC1Q4ADV7 1423 aa17.33■□□□□ 0.36
TMED1-202ENST00000586835 ATP5J2-PTCD1G3V325 749 aa17.33■□□□□ 0.36
TMED1-202ENST00000586835 HSP90B1P14625 803 aaKnown RBP17.33■□□□□ 0.36
TMED1-202ENST00000586835 HSP90AB4PQ58FF6 505 aa17.33■□□□□ 0.36
TMED1-202ENST00000586835 SLC10A5Q5PT55 438 aa17.33■□□□□ 0.36
TMED1-202ENST00000586835 ZBTB38Q8NAP3 1195 aaPredicted RBP17.33■□□□□ 0.36
TMED1-202ENST00000586835 CRY2Q49AN0 593 aa17.32■□□□□ 0.36
TMED1-202ENST00000586835 KAZALD1Q96I82 304 aa17.32■□□□□ 0.36
TMED1-202ENST00000586835 NOP58Q9Y2X3 529 aaKnown RBP17.32■□□□□ 0.36
TMED1-202ENST00000586835 TNRC6CQ9HCJ0 1690 aaKnown RBP17.32■□□□□ 0.36
TMED1-202ENST00000586835 SLX4Q8IY92 1834 aa17.31■□□□□ 0.36
TMED1-202ENST00000586835 RAB11FIP3O75154 756 aa17.31■□□□□ 0.36
TMED1-202ENST00000586835 PRPF40BQ6NWY9 871 aaKnown RBP17.31■□□□□ 0.36
TMED1-202ENST00000586835 SUCLG2Q96I99 432 aa17.31■□□□□ 0.36
TMED1-202ENST00000586835 C21orf2O43822 256 aa17.3■□□□□ 0.36
TMED1-202ENST00000586835 UBE3BQ7Z3V4 1068 aa17.3■□□□□ 0.36
TMED1-202ENST00000586835 CHD1LQ86WJ1 897 aa17.3■□□□□ 0.36
TMED1-202ENST00000586835 TRMT112Q9UI30 125 aaKnown RBP17.3■□□□□ 0.36
TMED1-202ENST00000586835 MYH3P11055 1940 aa17.29■□□□□ 0.36
TMED1-202ENST00000586835 PNMA6EA0A0J9YXQ4 647 aa17.29■□□□□ 0.36
TMED1-202ENST00000586835 SRGAP3O43295 1099 aa17.29■□□□□ 0.36
TMED1-202ENST00000586835 ALDH1B1P30837 517 aa17.29■□□□□ 0.36
TMED1-202ENST00000586835 HOXA10P31260 410 aaPredicted RBP17.29■□□□□ 0.36
TMED1-202ENST00000586835 C3orf67Q6ZVT6 689 aa17.29■□□□□ 0.36
TMED1-202ENST00000586835 C7orf43Q8WVR3 580 aa17.29■□□□□ 0.36
TMED1-202ENST00000586835 NLRP3Q96P20 1036 aa17.29■□□□□ 0.36
TMED1-202ENST00000586835 ZNF219Q9P2Y4 722 aaPredicted RBP17.29■□□□□ 0.36
TMED1-202ENST00000586835 SH3TC1Q8TE82 1336 aa17.28■□□□□ 0.36
TMED1-202ENST00000586835 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
TMED1-202ENST00000586835 SYNE4Q8N205 404 aa17.28■□□□□ 0.36
TMED1-202ENST00000586835 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
TMED1-202ENST00000586835 SBF1O95248 1867 aa17.28■□□□□ 0.36
TMED1-202ENST00000586835 CACNA1SQ13698 1873 aa17.28■□□□□ 0.36
TMED1-202ENST00000586835 NFKBIEO00221 500 aa17.27■□□□□ 0.36
TMED1-202ENST00000586835 FOXO4P98177 505 aa17.27■□□□□ 0.36
TMED1-202ENST00000586835 RASSF7Q02833 373 aa17.27■□□□□ 0.36
TMED1-202ENST00000586835 SOGA3Q5TF21 947 aa17.27■□□□□ 0.36
TMED1-202ENST00000586835 RPGRQ92834 1020 aaKnown RBP17.27■□□□□ 0.36
TMED1-202ENST00000586835 COPRSQ9NQ92 184 aa17.27■□□□□ 0.36
TMED1-202ENST00000586835 ZBTB47Q9UFB7 747 aaPredicted RBP17.27■□□□□ 0.36
TMED1-202ENST00000586835 FBXO3Q9UK99 471 aa17.27■□□□□ 0.36
TMED1-202ENST00000586835 LAMB2P55268 1798 aa17.26■□□□□ 0.35
TMED1-202ENST00000586835 HCLS1P14317 486 aaPredicted RBP17.26■□□□□ 0.35
TMED1-202ENST00000586835 ERC1Q8IUD2 1116 aa17.26■□□□□ 0.35
TMED1-202ENST00000586835 CRAMP1Q96RY5 1269 aa17.26■□□□□ 0.35
TMED1-202ENST00000586835 FER1L6Q2WGJ9 1857 aa17.25■□□□□ 0.35
TMED1-202ENST00000586835 CSF1RP07333 972 aa17.25■□□□□ 0.35
TMED1-202ENST00000586835 LMNB1P20700 586 aa17.25■□□□□ 0.35
TMED1-202ENST00000586835 PRELPP51888 382 aa17.25■□□□□ 0.35
TMED1-202ENST00000586835 ANKRD45Q5TZF3 282 aa17.25■□□□□ 0.35
TMED1-202ENST00000586835 FAM89AQ96GI7 184 aa17.25■□□□□ 0.35
TMED1-202ENST00000586835 RBM17Q96I25 401 aaKnown RBP17.25■□□□□ 0.35
TMED1-202ENST00000586835 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
TMED1-202ENST00000586835 LTBP3Q9NS15 1303 aa17.24■□□□□ 0.35
TMED1-202ENST00000586835 KIF1BPQ96EK5 621 aa17.24■□□□□ 0.35
TMED1-202ENST00000586835 LRRCC1Q9C099 1032 aa17.24■□□□□ 0.35
TMED1-202ENST00000586835 PDE8AO60658 829 aa17.23■□□□□ 0.35
TMED1-202ENST00000586835 RFX5P48382 616 aaPredicted RBP17.23■□□□□ 0.35
TMED1-202ENST00000586835 CCDC93Q567U6 631 aa17.23■□□□□ 0.35
TMED1-202ENST00000586835 EPHA10Q5JZY3 1008 aa17.23■□□□□ 0.35
TMED1-202ENST00000586835 TAOK3Q9H2K8 898 aa17.23■□□□□ 0.35
TMED1-202ENST00000586835 IRS4O14654 1257 aaPredicted RBP17.22■□□□□ 0.35
TMED1-202ENST00000586835 SURF6O75683 361 aaKnown RBP17.22■□□□□ 0.35
TMED1-202ENST00000586835 LMBR1LQ6UX01 489 aa17.22■□□□□ 0.35
TMED1-202ENST00000586835 OLFM4Q6UX06 510 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms