RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 SF3B3Q15393 1217 aaKnown RBP15.8■□□□□ 0.12
DNMT1-208ENST00000586667 FAM161AQ3B820 660 aa15.8■□□□□ 0.12
DNMT1-208ENST00000586667 CEP85Q6P2H3 762 aa15.8■□□□□ 0.12
DNMT1-208ENST00000586667 SIRT2Q8IXJ6 389 aa15.8■□□□□ 0.12
DNMT1-208ENST00000586667 TTLL11Q8NHH1 800 aa15.8■□□□□ 0.12
DNMT1-208ENST00000586667 PCDHB15Q9Y5E8 787 aa15.8■□□□□ 0.12
DNMT1-208ENST00000586667 GTF2E1P29083 439 aaPredicted RBP15.79■□□□□ 0.12
DNMT1-208ENST00000586667 GREM2Q9H772 168 aa15.79■□□□□ 0.12
DNMT1-208ENST00000586667 GOLGB1Q14789 3259 aaKnown RBP15.78■□□□□ 0.12
DNMT1-208ENST00000586667 LTBP1Q14766 1721 aa15.78■□□□□ 0.12
DNMT1-208ENST00000586667 PNMA6EA0A0J9YXQ4 647 aa15.78■□□□□ 0.12
DNMT1-208ENST00000586667 RFX5P48382 616 aaPredicted RBP15.78■□□□□ 0.12
DNMT1-208ENST00000586667 LMBR1LQ6UX01 489 aa15.78■□□□□ 0.12
DNMT1-208ENST00000586667 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
DNMT1-208ENST00000586667 NPHP1O15259 732 aa15.77■□□□□ 0.12
DNMT1-208ENST00000586667 SRGNP10124 158 aa15.77■□□□□ 0.12
DNMT1-208ENST00000586667 HOXA10P31260 410 aaPredicted RBP15.77■□□□□ 0.12
DNMT1-208ENST00000586667 SLC51AQ86UW1 340 aa15.77■□□□□ 0.12
DNMT1-208ENST00000586667 CCDC85AQ96PX6 553 aaPredicted RBP15.77■□□□□ 0.12
DNMT1-208ENST00000586667 KCNA3P22001 575 aa15.76■□□□□ 0.11
DNMT1-208ENST00000586667 CHRNA5P30532 468 aa15.76■□□□□ 0.11
DNMT1-208ENST00000586667 AAMPQ13685 434 aa15.76■□□□□ 0.11
DNMT1-208ENST00000586667 POLA2Q14181 598 aa15.76■□□□□ 0.11
DNMT1-208ENST00000586667 NLRP3Q96P20 1036 aa15.76■□□□□ 0.11
DNMT1-208ENST00000586667 CHMP4BQ9H444 224 aaKnown RBP15.76■□□□□ 0.11
DNMT1-208ENST00000586667 SEC31BQ9NQW1 1179 aa15.76■□□□□ 0.11
DNMT1-208ENST00000586667 CD2APQ9Y5K6 639 aa15.76■□□□□ 0.11
DNMT1-208ENST00000586667 SNED1Q8TER0 1413 aa15.76■□□□□ 0.11
DNMT1-208ENST00000586667 HSP90B1P14625 803 aaKnown RBP15.75■□□□□ 0.11
DNMT1-208ENST00000586667 PDE6BP35913 854 aa15.75■□□□□ 0.11
DNMT1-208ENST00000586667 CCDC152Q4G0S7 254 aa15.75■□□□□ 0.11
DNMT1-208ENST00000586667 NLGN2Q8NFZ4 835 aa15.75■□□□□ 0.11
DNMT1-208ENST00000586667 SSH3Q8TE77 659 aa15.75■□□□□ 0.11
DNMT1-208ENST00000586667 SLX4Q8IY92 1834 aa15.75■□□□□ 0.11
DNMT1-208ENST00000586667 SRGAP3O43295 1099 aa15.74■□□□□ 0.11
DNMT1-208ENST00000586667 ITGA6P23229 1130 aa15.74■□□□□ 0.11
DNMT1-208ENST00000586667 C2CD5Q86YS7 1000 aa15.74■□□□□ 0.11
DNMT1-208ENST00000586667 FHDC1Q9C0D6 1143 aaPredicted RBP15.74■□□□□ 0.11
DNMT1-208ENST00000586667 HDAC5Q9UQL6 1122 aa15.74■□□□□ 0.11
DNMT1-208ENST00000586667 DUOX1Q9NRD9 1551 aa15.74■□□□□ 0.11
DNMT1-208ENST00000586667 NEFLP07196 543 aa15.73■□□□□ 0.11
DNMT1-208ENST00000586667 NPR1P16066 1061 aa15.73■□□□□ 0.11
DNMT1-208ENST00000586667 DPEP1P16444 411 aa15.73■□□□□ 0.11
DNMT1-208ENST00000586667 ATP8B2P98198 1209 aa15.73■□□□□ 0.11
DNMT1-208ENST00000586667 KLHDC4Q8TBB5 520 aa15.73■□□□□ 0.11
DNMT1-208ENST00000586667 CELF1Q92879 486 aaKnown RBP15.73■□□□□ 0.11
DNMT1-208ENST00000586667 TGFB2P61812 414 aa15.72■□□□□ 0.11
DNMT1-208ENST00000586667 PTPN12Q05209 780 aaKnown RBP15.72■□□□□ 0.11
DNMT1-208ENST00000586667 STYK1Q6J9G0 422 aa15.72■□□□□ 0.11
DNMT1-208ENST00000586667 RPAP2Q8IXW5 612 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-208ENST00000586667 ZNF594Q96JF6 807 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-208ENST00000586667 CRAMP1Q96RY5 1269 aa15.72■□□□□ 0.11
DNMT1-208ENST00000586667 ARFGEF1Q9Y6D6 1849 aa15.71■□□□□ 0.11
DNMT1-208ENST00000586667 A0A0G2JLW4 131 aa15.71■□□□□ 0.11
DNMT1-208ENST00000586667 IFIT5Q13325 482 aaKnown RBP15.71■□□□□ 0.11
DNMT1-208ENST00000586667 HDAC1Q13547 482 aaPredicted RBP15.71■□□□□ 0.11
DNMT1-208ENST00000586667 GRAPQ13588 217 aa15.71■□□□□ 0.11
DNMT1-208ENST00000586667 GRAPLQ8TC17 118 aaPredicted RBP15.71■□□□□ 0.11
DNMT1-208ENST00000586667 RPGRQ92834 1020 aaKnown RBP15.71■□□□□ 0.11
DNMT1-208ENST00000586667 MASTLQ96GX5 879 aa15.71■□□□□ 0.11
DNMT1-208ENST00000586667 COPRSQ9NQ92 184 aa15.71■□□□□ 0.11
DNMT1-208ENST00000586667 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
DNMT1-208ENST00000586667 PA2G4Q9UQ80 394 aaKnown RBP15.71■□□□□ 0.11
DNMT1-208ENST00000586667 CHMP3Q9Y3E7 222 aa15.71■□□□□ 0.11
DNMT1-208ENST00000586667 H0YIN7 160 aa15.7■□□□□ 0.1
DNMT1-208ENST00000586667 ANKRD18BA2A2Z9 1011 aa15.69■□□□□ 0.1
DNMT1-208ENST00000586667 CCDC57Q2TAC2 916 aa15.69■□□□□ 0.1
DNMT1-208ENST00000586667 PRPF40BQ6NWY9 871 aaKnown RBP15.69■□□□□ 0.1
DNMT1-208ENST00000586667 DDX46Q7L014 1031 aaKnown RBP15.69■□□□□ 0.1
DNMT1-208ENST00000586667 ATG9AQ7Z3C6 839 aa15.69■□□□□ 0.1
DNMT1-208ENST00000586667 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
DNMT1-208ENST00000586667 PUS3Q9BZE2 481 aaKnown RBP15.69■□□□□ 0.1
DNMT1-208ENST00000586667 PPP1R1BQ9UD71 204 aaPredicted RBP15.69■□□□□ 0.1
DNMT1-208ENST00000586667 ARAP2Q8WZ64 1704 aa15.68■□□□□ 0.1
DNMT1-208ENST00000586667 IGHDP01880 384 aa15.68■□□□□ 0.1
DNMT1-208ENST00000586667 ERICH6BQ5W0A0 696 aa15.68■□□□□ 0.1
DNMT1-208ENST00000586667 C7orf43Q8WVR3 580 aa15.68■□□□□ 0.1
DNMT1-208ENST00000586667 RBM17Q96I25 401 aaKnown RBP15.68■□□□□ 0.1
DNMT1-208ENST00000586667 CDC5LQ99459 802 aaKnown RBP15.68■□□□□ 0.1
DNMT1-208ENST00000586667 SYT17Q9BSW7 474 aa15.68■□□□□ 0.1
DNMT1-208ENST00000586667 NOP58Q9Y2X3 529 aaKnown RBP15.68■□□□□ 0.1
DNMT1-208ENST00000586667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.68■□□□□ 0.1
DNMT1-208ENST00000586667 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
DNMT1-208ENST00000586667 RPS8P62241 208 aaKnown RBP15.67■□□□□ 0.1
DNMT1-208ENST00000586667 LRRC24Q50LG9 513 aa15.67■□□□□ 0.1
DNMT1-208ENST00000586667 OLFM4Q6UX06 510 aa15.67■□□□□ 0.1
DNMT1-208ENST00000586667 VGLL2Q8N8G2 317 aa15.67■□□□□ 0.1
DNMT1-208ENST00000586667 EYA2O00167 538 aa15.66■□□□□ 0.1
DNMT1-208ENST00000586667 PPEF1O14829 653 aaPredicted RBP15.66■□□□□ 0.1
DNMT1-208ENST00000586667 HMMRO75330 724 aa15.66■□□□□ 0.1
DNMT1-208ENST00000586667 CIAO1O76071 339 aa15.66■□□□□ 0.1
DNMT1-208ENST00000586667 ANKRD18AQ8IVF6 992 aa15.66■□□□□ 0.1
DNMT1-208ENST00000586667 CNKSR1Q969H4 720 aa15.66■□□□□ 0.1
DNMT1-208ENST00000586667 ZNF622Q969S3 477 aaKnown RBP eCLIP15.66■□□□□ 0.11e-12■■□□□ 11.5
DNMT1-208ENST00000586667 SIL1Q9H173 461 aa15.66■□□□□ 0.1
DNMT1-208ENST00000586667 BSDC1Q9NW68 430 aaPredicted RBP15.66■□□□□ 0.1
DNMT1-208ENST00000586667 EXOC6BQ9Y2D4 811 aa15.66■□□□□ 0.1
DNMT1-208ENST00000586667 RIPOR2Q9Y4F9 1068 aa15.66■□□□□ 0.1
DNMT1-208ENST00000586667 UTRNP46939 3433 aa15.66■□□□□ 0.1
DNMT1-208ENST00000586667 FER1L6Q2WGJ9 1857 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms