RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 RCAN3Q9UKA8 241 aa15.97■□□□□ 0.15
RETREG3-203ENST00000585894 FER1L6Q2WGJ9 1857 aa15.97■□□□□ 0.15
RETREG3-203ENST00000585894 GRIN3BO60391 1043 aa15.97■□□□□ 0.15
RETREG3-203ENST00000585894 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
RETREG3-203ENST00000585894 ARHGAP45Q92619 1136 aa15.97■□□□□ 0.15
RETREG3-203ENST00000585894 SEC31BQ9NQW1 1179 aa15.97■□□□□ 0.15
RETREG3-203ENST00000585894 SBF1O95248 1867 aa15.96■□□□□ 0.15
RETREG3-203ENST00000585894 ALDH1B1P30837 517 aa15.96■□□□□ 0.15
RETREG3-203ENST00000585894 CTSWP56202 376 aa15.96■□□□□ 0.15
RETREG3-203ENST00000585894 RASSF7Q02833 373 aa15.96■□□□□ 0.15
RETREG3-203ENST00000585894 EPHA10Q5JZY3 1008 aa15.96■□□□□ 0.15
RETREG3-203ENST00000585894 ZKSCAN2Q63HK3 967 aa15.96■□□□□ 0.15
RETREG3-203ENST00000585894 CRAMP1Q96RY5 1269 aa15.96■□□□□ 0.15
RETREG3-203ENST00000585894 IPO8O15397 1037 aaKnown RBP15.95■□□□□ 0.14
RETREG3-203ENST00000585894 DDX46Q7L014 1031 aaKnown RBP15.95■□□□□ 0.14
RETREG3-203ENST00000585894 C7orf43Q8WVR3 580 aa15.95■□□□□ 0.14
RETREG3-203ENST00000585894 CELF1Q92879 486 aaKnown RBP15.95■□□□□ 0.14
RETREG3-203ENST00000585894 SUCLG2Q96I99 432 aa15.95■□□□□ 0.14
RETREG3-203ENST00000585894 PPEF1O14829 653 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-203ENST00000585894 PLIN1O60240 522 aa15.94■□□□□ 0.14
RETREG3-203ENST00000585894 TTLL11Q8NHH1 800 aa15.94■□□□□ 0.14
RETREG3-203ENST00000585894 USP44Q9H0E7 712 aa15.94■□□□□ 0.14
RETREG3-203ENST00000585894 GREM2Q9H772 168 aa15.94■□□□□ 0.14
RETREG3-203ENST00000585894 RLBP1P12271 317 aa15.94■□□□□ 0.14
RETREG3-203ENST00000585894 CCT4P50991 539 aaKnown RBP15.94■□□□□ 0.14
RETREG3-203ENST00000585894 FOXO4P98177 505 aa15.94■□□□□ 0.14
RETREG3-203ENST00000585894 GRAPQ13588 217 aa15.94■□□□□ 0.14
RETREG3-203ENST00000585894 GRAPLQ8TC17 118 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-203ENST00000585894 KAZALD1Q96I82 304 aa15.94■□□□□ 0.14
RETREG3-203ENST00000585894 NFKBIEO00221 500 aa15.93■□□□□ 0.14
RETREG3-203ENST00000585894 HSP90B1P14625 803 aaKnown RBP15.93■□□□□ 0.14
RETREG3-203ENST00000585894 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
RETREG3-203ENST00000585894 CCDC152Q4G0S7 254 aa15.93■□□□□ 0.14
RETREG3-203ENST00000585894 TMEM57Q8N5G2 664 aa15.93■□□□□ 0.14
RETREG3-203ENST00000585894 PLA2G12BQ9BX93 195 aa15.93■□□□□ 0.14
RETREG3-203ENST00000585894 LRRC37AA6NMS7 1700 aa15.93■□□□□ 0.14
RETREG3-203ENST00000585894 UTYO14607 1347 aa15.92■□□□□ 0.14
RETREG3-203ENST00000585894 PRELPP51888 382 aa15.92■□□□□ 0.14
RETREG3-203ENST00000585894 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
RETREG3-203ENST00000585894 PANK1Q8TE04 598 aa15.91■□□□□ 0.14
RETREG3-203ENST00000585894 MEIS3Q99687 375 aa15.91■□□□□ 0.14
RETREG3-203ENST00000585894 CHMP3Q9Y3E7 222 aa15.91■□□□□ 0.14
RETREG3-203ENST00000585894 CCDC93Q567U6 631 aa15.91■□□□□ 0.14
RETREG3-203ENST00000585894 LMBR1LQ6UX01 489 aa15.91■□□□□ 0.14
RETREG3-203ENST00000585894 SNED1Q8TER0 1413 aa15.9■□□□□ 0.14
RETREG3-203ENST00000585894 CSF1RP07333 972 aa15.9■□□□□ 0.14
RETREG3-203ENST00000585894 FTSJ3Q8IY81 847 aaKnown RBP15.9■□□□□ 0.14
RETREG3-203ENST00000585894 DZIP1LQ8IYY4 767 aaKnown RBP15.9■□□□□ 0.14
RETREG3-203ENST00000585894 BICC1Q9H694 974 aaKnown RBP15.9■□□□□ 0.14
RETREG3-203ENST00000585894 ATP6V0A2Q9Y487 856 aa15.9■□□□□ 0.14
RETREG3-203ENST00000585894 ITGA6P23229 1130 aa15.89■□□□□ 0.13
RETREG3-203ENST00000585894 RPS8P62241 208 aaKnown RBP15.89■□□□□ 0.13
RETREG3-203ENST00000585894 ANKRD44Q8N8A2 993 aa15.89■□□□□ 0.13
RETREG3-203ENST00000585894 TIAM2Q8IVF5 1701 aa15.89■□□□□ 0.13
RETREG3-203ENST00000585894 BBOX1O75936 387 aa15.88■□□□□ 0.13
RETREG3-203ENST00000585894 UBTFL1P0CB47 393 aaPredicted RBP15.88■□□□□ 0.13
RETREG3-203ENST00000585894 RTL9Q8NET4 1388 aa15.88■□□□□ 0.13
RETREG3-203ENST00000585894 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
RETREG3-203ENST00000585894 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
RETREG3-203ENST00000585894 ITPRIPQ8IWB1 547 aa15.88■□□□□ 0.13
RETREG3-203ENST00000585894 ZNF594Q96JF6 807 aaPredicted RBP15.88■□□□□ 0.13
RETREG3-203ENST00000585894 TAOK3Q9H2K8 898 aa15.88■□□□□ 0.13
RETREG3-203ENST00000585894 ZNF277Q9NRM2 450 aaPredicted RBP15.88■□□□□ 0.13
RETREG3-203ENST00000585894 LRRFIP2Q9Y608 721 aaKnown RBP15.88■□□□□ 0.13
RETREG3-203ENST00000585894 DICER1Q9UPY3 1922 aaKnown RBP15.88■□□□□ 0.13
RETREG3-203ENST00000585894 LTBP1Q14766 1721 aa15.88■□□□□ 0.13
RETREG3-203ENST00000585894 DUOX1Q9NRD9 1551 aa15.87■□□□□ 0.13
RETREG3-203ENST00000585894 A0A1B0GUL6 1792 aa15.87■□□□□ 0.13
RETREG3-203ENST00000585894 SOGA3Q5TF21 947 aa15.87■□□□□ 0.13
RETREG3-203ENST00000585894 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
RETREG3-203ENST00000585894 SP8Q8IXZ3 490 aa15.87■□□□□ 0.13
RETREG3-203ENST00000585894 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
RETREG3-203ENST00000585894 CDC5LQ99459 802 aaKnown RBP15.86■□□□□ 0.13
RETREG3-203ENST00000585894 COL4A5P29400 1685 aa15.85■□□□□ 0.13
RETREG3-203ENST00000585894 GPSM2P81274 684 aa15.85■□□□□ 0.13
RETREG3-203ENST00000585894 FKBP4Q02790 459 aaKnown RBP eCLIP15.85■□□□□ 0.13
RETREG3-203ENST00000585894 RTKN2Q8IZC4 609 aa15.85■□□□□ 0.13
RETREG3-203ENST00000585894 ANKRD18BA2A2Z9 1011 aa15.85■□□□□ 0.13
RETREG3-203ENST00000585894 YY1P25490 414 aa15.85■□□□□ 0.13
RETREG3-203ENST00000585894 IFIT5Q13325 482 aaKnown RBP15.85■□□□□ 0.13
RETREG3-203ENST00000585894 RABL6Q3YEC7 729 aaPredicted RBP15.85■□□□□ 0.13
RETREG3-203ENST00000585894 MPNDQ8N594 471 aa15.85■□□□□ 0.13
RETREG3-203ENST00000585894 GPR101Q96P66 508 aaPredicted RBP15.85■□□□□ 0.13
RETREG3-203ENST00000585894 NSFL1CQ9UNZ2 370 aaKnown RBP15.85■□□□□ 0.13
RETREG3-203ENST00000585894 COG6Q9Y2V7 657 aa15.85■□□□□ 0.13
RETREG3-203ENST00000585894 WTIPA6NIX2 430 aaPredicted RBP15.84■□□□□ 0.13
RETREG3-203ENST00000585894 LMNB1P20700 586 aa15.84■□□□□ 0.13
RETREG3-203ENST00000585894 CC2D2BQ6DHV5 1058 aa15.84■□□□□ 0.13
RETREG3-203ENST00000585894 DPP8Q6V1X1 898 aaPredicted RBP15.84■□□□□ 0.13
RETREG3-203ENST00000585894 KLHDC4Q8TBB5 520 aa15.84■□□□□ 0.13
RETREG3-203ENST00000585894 TMX4Q9H1E5 349 aaPredicted RBP15.84■□□□□ 0.13
RETREG3-203ENST00000585894 C1orf115Q9H7X2 142 aa15.84■□□□□ 0.13
RETREG3-203ENST00000585894 LTBP3Q9NS15 1303 aa15.84■□□□□ 0.13
RETREG3-203ENST00000585894 IGHMBP2P38935 993 aaKnown RBP15.83■□□□□ 0.13
RETREG3-203ENST00000585894 CCDC57Q2TAC2 916 aa15.83■□□□□ 0.13
RETREG3-203ENST00000585894 TMC4Q7Z404 712 aa15.83■□□□□ 0.13
RETREG3-203ENST00000585894 GNAI3P08754 354 aa15.82■□□□□ 0.12
RETREG3-203ENST00000585894 PSMD1Q99460 953 aa15.82■□□□□ 0.12
RETREG3-203ENST00000585894 PUS3Q9BZE2 481 aaKnown RBP15.82■□□□□ 0.12
RETREG3-203ENST00000585894 TAF7LQ5H9L4 462 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms