RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 VAMP4O75379 141 aa16.88■□□□□ 0.29
ERBB2-220ENST00000584684 SP8Q8IXZ3 490 aa16.88■□□□□ 0.29
ERBB2-220ENST00000584684 PI4KAP1Q8N8J0 262 aa16.88■□□□□ 0.29
ERBB2-220ENST00000584684 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-220ENST00000584684 SALL2Q9Y467 1007 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-220ENST00000584684 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
ERBB2-220ENST00000584684 MYH3P11055 1940 aa16.88■□□□□ 0.29
ERBB2-220ENST00000584684 COL4A1P02462 1669 aa16.88■□□□□ 0.29
ERBB2-220ENST00000584684 SLC4A2P04920 1241 aa16.87■□□□□ 0.29
ERBB2-220ENST00000584684 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
ERBB2-220ENST00000584684 SLC51AQ86UW1 340 aa16.87■□□□□ 0.29
ERBB2-220ENST00000584684 SMC1BQ8NDV3 1235 aa16.87■□□□□ 0.29
ERBB2-220ENST00000584684 JDP2Q8WYK2 163 aa16.87■□□□□ 0.29
ERBB2-220ENST00000584684 CDHR2Q9BYE9 1310 aa16.87■□□□□ 0.29
ERBB2-220ENST00000584684 IQCA1LA6NCM1 817 aa16.86■□□□□ 0.29
ERBB2-220ENST00000584684 CCER2I3L3R5 266 aa16.86■□□□□ 0.29
ERBB2-220ENST00000584684 DDNO94850 711 aaPredicted RBP16.86■□□□□ 0.29
ERBB2-220ENST00000584684 IGKV5-2P06315 115 aa16.86■□□□□ 0.29
ERBB2-220ENST00000584684 NEXNQ0ZGT2 675 aa16.86■□□□□ 0.29
ERBB2-220ENST00000584684 FLIIQ13045 1269 aa16.86■□□□□ 0.29
ERBB2-220ENST00000584684 G2E3Q7L622 706 aa16.86■□□□□ 0.29
ERBB2-220ENST00000584684 SUPT20HQ8NEM7 779 aa16.86■□□□□ 0.29
ERBB2-220ENST00000584684 ADAMTSL1Q8N6G6 1762 aa16.85■□□□□ 0.29
ERBB2-220ENST00000584684 APLP1P51693 650 aa16.85■□□□□ 0.29
ERBB2-220ENST00000584684 GPC2Q8N158 579 aa16.85■□□□□ 0.29
ERBB2-220ENST00000584684 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
ERBB2-220ENST00000584684 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
ERBB2-220ENST00000584684 RTL5Q5HYW3 569 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-220ENST00000584684 DPP8Q6V1X1 898 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-220ENST00000584684 LARGE2Q8N3Y3 721 aa16.84■□□□□ 0.29
ERBB2-220ENST00000584684 NEURL1BA8MQ27 555 aa16.83■□□□□ 0.28
ERBB2-220ENST00000584684 PDE8AO60658 829 aa16.83■□□□□ 0.28
ERBB2-220ENST00000584684 MPNDQ8N594 471 aa16.83■□□□□ 0.28
ERBB2-220ENST00000584684 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
ERBB2-220ENST00000584684 CELF1Q92879 486 aaKnown RBP16.83■□□□□ 0.28
ERBB2-220ENST00000584684 PPIP5K2O43314 1243 aa16.82■□□□□ 0.28
ERBB2-220ENST00000584684 KIAA2012Q0VF49 1180 aa16.82■□□□□ 0.28
ERBB2-220ENST00000584684 FKBP5Q13451 457 aaPredicted RBP16.82■□□□□ 0.28
ERBB2-220ENST00000584684 CCDC152Q4G0S7 254 aa16.82■□□□□ 0.28
ERBB2-220ENST00000584684 DNAAF4Q8WXU2 420 aa16.82■□□□□ 0.28
ERBB2-220ENST00000584684 CTSWP56202 376 aa16.81■□□□□ 0.28
ERBB2-220ENST00000584684 EIF6P56537 245 aaKnown RBP16.81■□□□□ 0.28
ERBB2-220ENST00000584684 AOC3Q16853 763 aa16.81■□□□□ 0.28
ERBB2-220ENST00000584684 CWF19L2Q2TBE0 894 aaKnown RBP16.81■□□□□ 0.28
ERBB2-220ENST00000584684 NIM1KQ8IY84 436 aa16.81■□□□□ 0.28
ERBB2-220ENST00000584684 LINS1Q8NG48 757 aa16.81■□□□□ 0.28
ERBB2-220ENST00000584684 TAF1DQ9H5J8 278 aaPredicted RBP16.81■□□□□ 0.28
ERBB2-220ENST00000584684 E9PSI1 815 aa16.8■□□□□ 0.28
ERBB2-220ENST00000584684 RPS8P62241 208 aaKnown RBP16.8■□□□□ 0.28
ERBB2-220ENST00000584684 HACL1Q9UJ83 578 aa16.8■□□□□ 0.28
ERBB2-220ENST00000584684 H7C1W4 665 aa16.79■□□□□ 0.28
ERBB2-220ENST00000584684 GCKRQ14397 625 aa16.79■□□□□ 0.28
ERBB2-220ENST00000584684 PLA2G12BQ9BX93 195 aa16.79■□□□□ 0.28
ERBB2-220ENST00000584684 PODXL2Q9NZ53 605 aa16.79■□□□□ 0.28
ERBB2-220ENST00000584684 ZNRF3Q9ULT6 936 aa16.79■□□□□ 0.28
ERBB2-220ENST00000584684 CHADLQ6NUI6 762 aa16.78■□□□□ 0.28
ERBB2-220ENST00000584684 LDHDQ86WU2 507 aa16.78■□□□□ 0.28
ERBB2-220ENST00000584684 SEC31BQ9NQW1 1179 aa16.78■□□□□ 0.28
ERBB2-220ENST00000584684 EPHX2P34913 555 aa16.77■□□□□ 0.28
ERBB2-220ENST00000584684 CASP7P55210 303 aa16.77■□□□□ 0.28
ERBB2-220ENST00000584684 UBE3BQ7Z3V4 1068 aa16.77■□□□□ 0.28
ERBB2-220ENST00000584684 PNMA8AQ86V59 439 aaPredicted RBP16.77■□□□□ 0.28
ERBB2-220ENST00000584684 TTLL11Q8NHH1 800 aa16.77■□□□□ 0.28
ERBB2-220ENST00000584684 JARID2Q92833 1246 aaPredicted RBP16.77■□□□□ 0.28
ERBB2-220ENST00000584684 SPEF2Q9C093 1822 aa16.77■□□□□ 0.27
ERBB2-220ENST00000584684 POTEIP0CG38 1075 aa16.76■□□□□ 0.27
ERBB2-220ENST00000584684 POTEJP0CG39 1038 aa16.76■□□□□ 0.27
ERBB2-220ENST00000584684 SCNN1DP51172 638 aa16.76■□□□□ 0.27
ERBB2-220ENST00000584684 GPSM2P81274 684 aa16.76■□□□□ 0.27
ERBB2-220ENST00000584684 SLFN5Q08AF3 891 aa16.76■□□□□ 0.27
ERBB2-220ENST00000584684 CDC5LQ99459 802 aaKnown RBP16.76■□□□□ 0.27
ERBB2-220ENST00000584684 NSFL1CQ9UNZ2 370 aaKnown RBP16.76■□□□□ 0.27
ERBB2-220ENST00000584684 WASHC4Q2M389 1173 aa16.75■□□□□ 0.27
ERBB2-220ENST00000584684 BEND3Q5T5X7 828 aa16.75■□□□□ 0.27
ERBB2-220ENST00000584684 ANKRD18AQ8IVF6 992 aa16.75■□□□□ 0.27
ERBB2-220ENST00000584684 DNAJC5GQ8N7S2 189 aa16.75■□□□□ 0.27
ERBB2-220ENST00000584684 POLLQ9UGP5 575 aa16.75■□□□□ 0.27
ERBB2-220ENST00000584684 GJA3Q9Y6H8 435 aa16.75■□□□□ 0.27
ERBB2-220ENST00000584684 LMOD1P29536 600 aaPredicted RBP16.74■□□□□ 0.27
ERBB2-220ENST00000584684 CXCL9Q07325 125 aa16.74■□□□□ 0.27
ERBB2-220ENST00000584684 TBC1D16Q8TBP0 767 aa16.74■□□□□ 0.27
ERBB2-220ENST00000584684 EYA3Q99504 573 aa16.74■□□□□ 0.27
ERBB2-220ENST00000584684 GREM2Q9H772 168 aa16.74■□□□□ 0.27
ERBB2-220ENST00000584684 PSME4Q14997 1843 aa16.74■□□□□ 0.27
ERBB2-220ENST00000584684 XDHP47989 1333 aa16.73■□□□□ 0.27
ERBB2-220ENST00000584684 ZNF609O15014 1411 aa16.73■□□□□ 0.27
ERBB2-220ENST00000584684 F6X3S4 739 aa16.73■□□□□ 0.27
ERBB2-220ENST00000584684 TNIP1Q15025 636 aa16.73■□□□□ 0.27
ERBB2-220ENST00000584684 CIAPIN1Q6FI81 312 aa16.73■□□□□ 0.27
ERBB2-220ENST00000584684 TRMT2AQ8IZ69 625 aaKnown RBP16.73■□□□□ 0.27
ERBB2-220ENST00000584684 BSDC1Q9NW68 430 aaPredicted RBP16.73■□□□□ 0.27
ERBB2-220ENST00000584684 GPRC5DQ9NZD1 345 aa16.73■□□□□ 0.27
ERBB2-220ENST00000584684 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
ERBB2-220ENST00000584684 YDJCA8MPS7 323 aa16.72■□□□□ 0.27
ERBB2-220ENST00000584684 C6orf229H3BNL8 230 aa16.72■□□□□ 0.27
ERBB2-220ENST00000584684 ALDH1L1O75891 902 aa16.72■□□□□ 0.27
ERBB2-220ENST00000584684 CSF1RP07333 972 aa16.72■□□□□ 0.27
ERBB2-220ENST00000584684 CCDC85AQ96PX6 553 aaPredicted RBP16.72■□□□□ 0.27
ERBB2-220ENST00000584684 GGA1Q9UJY5 639 aa16.72■□□□□ 0.27
ERBB2-220ENST00000584684 PTPRCP08575 1304 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms