RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 PUF60Q9UHX1 559 aaKnown RBP11.87□□□□□ -0.51
CDH8-211ENST00000584337 CFAP74Q9C0B2 1584 aa11.87□□□□□ -0.51
CDH8-211ENST00000584337 HNRNPH1P31943 449 aaKnown RBP11.87□□□□□ -0.51
CDH8-211ENST00000584337 GCKP35557 465 aa11.87□□□□□ -0.51
CDH8-211ENST00000584337 CCT5P48643 541 aa11.87□□□□□ -0.51
CDH8-211ENST00000584337 MYO6Q9UM54 1294 aa11.87□□□□□ -0.51
CDH8-211ENST00000584337 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
CDH8-211ENST00000584337 PSMA5P28066 241 aa11.87□□□□□ -0.51
CDH8-211ENST00000584337 ELF1P32519 619 aa11.87□□□□□ -0.51
CDH8-211ENST00000584337 ZSCAN16Q9H4T2 348 aaPredicted RBP11.87□□□□□ -0.51
CDH8-211ENST00000584337 KIF5CO60282 957 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 GSCP56915 257 aaPredicted RBP11.86□□□□□ -0.51
CDH8-211ENST00000584337 CCAR1Q8IX12 1150 aaKnown RBP11.86□□□□□ -0.51
CDH8-211ENST00000584337 CNTROBQ8N137 903 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 NECAB1Q8N987 351 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 ATG3Q9NT62 314 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 GOLGA6L7A0A1B0GV03 622 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 ARID4AP29374 1257 aaPredicted RBP11.86□□□□□ -0.51
CDH8-211ENST00000584337 ZKSCAN8Q15776 578 aaPredicted RBP11.86□□□□□ -0.51
CDH8-211ENST00000584337 RPAP1Q9BWH6 1393 aaPredicted RBP11.86□□□□□ -0.51
CDH8-211ENST00000584337 PES1O00541 588 aaKnown RBP11.86□□□□□ -0.51
CDH8-211ENST00000584337 NR1I2O75469 434 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 AKAP17AQ02040 695 aaKnown RBP11.86□□□□□ -0.51
CDH8-211ENST00000584337 REXO1L1PQ8IX06 675 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 FAM76AQ8TAV0 307 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 CHUKO15111 745 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 RHOXF2BP0C7M4 288 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 MCM3P25205 808 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 B4GALNT4Q76KP1 1039 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 LRRN4CLQ8ND94 238 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
CDH8-211ENST00000584337 RHOXF2Q9BQY4 288 aa11.86□□□□□ -0.51
CDH8-211ENST00000584337 VAMP4O75379 141 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 SASH3O75995 380 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 SCP2P22307 547 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 CFAP70Q5T0N1 1121 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
CDH8-211ENST00000584337 ZNF396Q96N95 335 aaPredicted RBP11.85□□□□□ -0.51
CDH8-211ENST00000584337 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 A2MP01023 1474 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 DTNBO60941 627 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 PRKAR2BP31323 418 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 RBBP5Q15291 538 aaKnown RBP11.85□□□□□ -0.51
CDH8-211ENST00000584337 ANKRD1Q15327 319 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 FBXW10Q5XX13 1052 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 CEP85Q6P2H3 762 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 FOXR1Q6PIV2 292 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 FUT8Q9BYC5 575 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 FOSBP53539 338 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 FAM169AQ9Y6X4 670 aa11.85□□□□□ -0.51
CDH8-211ENST00000584337 MAP4K4O95819 1239 aaPredicted RBP11.84□□□□□ -0.51
CDH8-211ENST00000584337 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 XPO4Q9C0E2 1151 aaKnown RBP11.84□□□□□ -0.51
CDH8-211ENST00000584337 TARBP1Q13395 1621 aaKnown RBP11.84□□□□□ -0.51
CDH8-211ENST00000584337 RTL1A6NKG5 1358 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 CTAGE15A4D2H0 777 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 CTAGE8P0CG41 777 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 STK3Q13188 491 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 OLFM4Q6UX06 510 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 CTAGE6Q86UF2 777 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 CTAGE4Q8IX94 777 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 FSIP1Q8NA03 581 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 EIF2AK4Q9P2K8 1649 aaKnown RBP11.84□□□□□ -0.51
CDH8-211ENST00000584337 GNAI2P04899 355 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 CEP85LQ5SZL2 805 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 TEX11Q8IYF3 940 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 THUMPD2Q9BTF0 503 aaKnown RBP11.84□□□□□ -0.51
CDH8-211ENST00000584337 TERF2IPQ9NYB0 399 aa11.84□□□□□ -0.51
CDH8-211ENST00000584337 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
CDH8-211ENST00000584337 UBASH3AP57075 661 aa11.83□□□□□ -0.52
CDH8-211ENST00000584337 DDX54Q8TDD1 881 aaKnown RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 URB2Q14146 1524 aaKnown RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 H3BQF6 201 aa11.83□□□□□ -0.52
CDH8-211ENST00000584337 HSPA4P34932 840 aa11.83□□□□□ -0.52
CDH8-211ENST00000584337 ARHGAP25P42331 645 aa11.83□□□□□ -0.52
CDH8-211ENST00000584337 NAIF1Q69YI7 327 aaPredicted RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 CCDC148Q8NFR7 591 aa11.83□□□□□ -0.52
CDH8-211ENST00000584337 BCAS4Q8TDM0 211 aa11.83□□□□□ -0.52
CDH8-211ENST00000584337 RSRC1Q96IZ7 334 aaKnown RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 RABEP2Q9H5N1 569 aa11.83□□□□□ -0.52
CDH8-211ENST00000584337 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 TROQ12816 1431 aaPredicted RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 PRG4Q92954 1404 aaPredicted RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 TTC19Q6DKK2 380 aaPredicted RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 LRRC31Q6UY01 552 aa11.83□□□□□ -0.52
CDH8-211ENST00000584337 FAM43BQ6ZT52 329 aaPredicted RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 OSBPL5Q9H0X9 879 aaPredicted RBP11.83□□□□□ -0.52
CDH8-211ENST00000584337 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.52
CDH8-211ENST00000584337 LMOD1P29536 600 aaPredicted RBP11.82□□□□□ -0.52
CDH8-211ENST00000584337 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
CDH8-211ENST00000584337 SGSM3Q96HU1 749 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 NUCKS1Q9H1E3 243 aaKnown RBP11.82□□□□□ -0.52
CDH8-211ENST00000584337 ZNF330Q9Y3S2 320 aaPredicted RBP11.82□□□□□ -0.52
CDH8-211ENST00000584337 NDUFAB1O14561 156 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 CPP00450 1065 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 KARSQ15046 597 aaKnown RBP11.82□□□□□ -0.52
CDH8-211ENST00000584337 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms