RNA–Protein interactions for RNA: ENST00000584313.5

CLTC-213, Transcript of clathrin heavy chain, humanhuman

TSL 3

Gene CLTC, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-213ENST00000584313 MIER1Q8N108 512 aa18.35■□□□□ 0.53
CLTC-213ENST00000584313 DNAAF4Q8WXU2 420 aa18.35■□□□□ 0.53
CLTC-213ENST00000584313 TIAM2Q8IVF5 1701 aa18.35■□□□□ 0.53
CLTC-213ENST00000584313 VEGFAP15692 232 aaPredicted RBP18.34■□□□□ 0.53
CLTC-213ENST00000584313 SLFN5Q08AF3 891 aa18.34■□□□□ 0.53
CLTC-213ENST00000584313 CELF1Q92879 486 aaKnown RBP18.34■□□□□ 0.53
CLTC-213ENST00000584313 CDHR2Q9BYE9 1310 aa18.33■□□□□ 0.53
CLTC-213ENST00000584313 DDX60Q8IY21 1712 aaKnown RBP18.33■□□□□ 0.52
CLTC-213ENST00000584313 PDE8AO60658 829 aa18.33■□□□□ 0.52
CLTC-213ENST00000584313 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.52
CLTC-213ENST00000584313 DPP8Q6V1X1 898 aaPredicted RBP18.33■□□□□ 0.52
CLTC-213ENST00000584313 JDP2Q8WYK2 163 aa18.33■□□□□ 0.52
CLTC-213ENST00000584313 LAMB2P55268 1798 aa18.32■□□□□ 0.52
CLTC-213ENST00000584313 POTECB2RU33 542 aa18.32■□□□□ 0.52
CLTC-213ENST00000584313 FZD9O00144 591 aa18.32■□□□□ 0.52
CLTC-213ENST00000584313 GCKRQ14397 625 aa18.32■□□□□ 0.52
CLTC-213ENST00000584313 CCDC152Q4G0S7 254 aa18.32■□□□□ 0.52
CLTC-213ENST00000584313 LARGE2Q8N3Y3 721 aa18.32■□□□□ 0.52
CLTC-213ENST00000584313 MPNDQ8N594 471 aa18.32■□□□□ 0.52
CLTC-213ENST00000584313 LINS1Q8NG48 757 aa18.32■□□□□ 0.52
CLTC-213ENST00000584313 RBM46Q8TBY0 533 aaKnown RBP18.32■□□□□ 0.52
CLTC-213ENST00000584313 CDCA7LQ96GN5 454 aa18.32■□□□□ 0.52
CLTC-213ENST00000584313 RTFDC1Q9BY42 306 aaPredicted RBP18.32■□□□□ 0.52
CLTC-213ENST00000584313 ZNF541Q9H0D2 1346 aa18.31■□□□□ 0.52
CLTC-213ENST00000584313 F6X3S4 739 aa18.31■□□□□ 0.52
CLTC-213ENST00000584313 H7C1W4 665 aa18.31■□□□□ 0.52
CLTC-213ENST00000584313 RPS8P62241 208 aaKnown RBP18.31■□□□□ 0.52
CLTC-213ENST00000584313 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
CLTC-213ENST00000584313 SUPT20HQ8NEM7 779 aa18.31■□□□□ 0.52
CLTC-213ENST00000584313 SEC31BQ9NQW1 1179 aa18.31■□□□□ 0.52
CLTC-213ENST00000584313 CCDC88AQ3V6T2 1871 aa18.31■□□□□ 0.52
CLTC-213ENST00000584313 PPIP5K2O43314 1243 aa18.3■□□□□ 0.52
CLTC-213ENST00000584313 CCDC85AQ96PX6 553 aaPredicted RBP18.3■□□□□ 0.52
CLTC-213ENST00000584313 VPS33BQ9H267 617 aa18.3■□□□□ 0.52
CLTC-213ENST00000584313 DICER1Q9UPY3 1922 aaKnown RBP18.29■□□□□ 0.52
CLTC-213ENST00000584313 HSPA6P17066 643 aa18.29■□□□□ 0.52
CLTC-213ENST00000584313 CTSWP56202 376 aa18.29■□□□□ 0.52
CLTC-213ENST00000584313 AOC3Q16853 763 aa18.29■□□□□ 0.52
CLTC-213ENST00000584313 TRMT2AQ8IZ69 625 aaKnown RBP18.29■□□□□ 0.52
CLTC-213ENST00000584313 L3MBTL3Q96JM7 780 aaPredicted RBP18.29■□□□□ 0.52
CLTC-213ENST00000584313 COL4A5P29400 1685 aa18.28■□□□□ 0.52
CLTC-213ENST00000584313 BEND3Q5T5X7 828 aa18.28■□□□□ 0.52
CLTC-213ENST00000584313 NIM1KQ8IY84 436 aa18.28■□□□□ 0.52
CLTC-213ENST00000584313 TTLL11Q8NHH1 800 aa18.28■□□□□ 0.52
CLTC-213ENST00000584313 WDR90Q96KV7 1748 aa18.27■□□□□ 0.52
CLTC-213ENST00000584313 CASP7P55210 303 aa18.27■□□□□ 0.52
CLTC-213ENST00000584313 EIF6P56537 245 aaKnown RBP18.27■□□□□ 0.52
CLTC-213ENST00000584313 FSTL1Q12841 308 aa18.27■□□□□ 0.52
CLTC-213ENST00000584313 GPC2Q8N158 579 aa18.27■□□□□ 0.52
CLTC-213ENST00000584313 MRPL50Q8N5N7 158 aaKnown RBP18.27■□□□□ 0.52
CLTC-213ENST00000584313 NSFL1CQ9UNZ2 370 aaKnown RBP18.27■□□□□ 0.52
CLTC-213ENST00000584313 COL4A1P02462 1669 aa18.27■□□□□ 0.52
CLTC-213ENST00000584313 IQCA1LA6NCM1 817 aa18.26■□□□□ 0.51
CLTC-213ENST00000584313 GPSM2P81274 684 aa18.26■□□□□ 0.51
CLTC-213ENST00000584313 KIAA2012Q0VF49 1180 aa18.26■□□□□ 0.51
CLTC-213ENST00000584313 SMC1BQ8NDV3 1235 aa18.26■□□□□ 0.51
CLTC-213ENST00000584313 SSH1Q8WYL5 1049 aa18.26■□□□□ 0.51
CLTC-213ENST00000584313 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
CLTC-213ENST00000584313 GREM2Q9H772 168 aa18.26■□□□□ 0.51
CLTC-213ENST00000584313 ANKRD18AQ8IVF6 992 aa18.25■□□□□ 0.51
CLTC-213ENST00000584313 CDC5LQ99459 802 aaKnown RBP18.25■□□□□ 0.51
CLTC-213ENST00000584313 ZNRF3Q9ULT6 936 aa18.25■□□□□ 0.51
CLTC-213ENST00000584313 GJA3Q9Y6H8 435 aa18.25■□□□□ 0.51
CLTC-213ENST00000584313 RTL9Q8NET4 1388 aa18.25■□□□□ 0.51
CLTC-213ENST00000584313 C6orf229H3BNL8 230 aa18.24■□□□□ 0.51
CLTC-213ENST00000584313 SLC4A10Q6U841 1118 aa18.24■□□□□ 0.51
CLTC-213ENST00000584313 POLLQ9UGP5 575 aa18.24■□□□□ 0.51
CLTC-213ENST00000584313 TAF1P21675 1872 aa18.24■□□□□ 0.51
CLTC-213ENST00000584313 CACNA1FO60840 1977 aa18.23■□□□□ 0.51
CLTC-213ENST00000584313 DUOX1Q9NRD9 1551 aa18.23■□□□□ 0.51
CLTC-213ENST00000584313 WASHC4Q2M389 1173 aa18.23■□□□□ 0.51
CLTC-213ENST00000584313 BCL2L13Q9BXK5 485 aa18.23■□□□□ 0.51
CLTC-213ENST00000584313 TAF1DQ9H5J8 278 aaPredicted RBP18.23■□□□□ 0.51
CLTC-213ENST00000584313 PODXL2Q9NZ53 605 aa18.23■□□□□ 0.51
CLTC-213ENST00000584313 HACL1Q9UJ83 578 aa18.23■□□□□ 0.51
CLTC-213ENST00000584313 LRRC37AA6NMS7 1700 aa18.23■□□□□ 0.51
CLTC-213ENST00000584313 ALDH1L1O75891 902 aa18.22■□□□□ 0.51
CLTC-213ENST00000584313 CSF1RP07333 972 aa18.22■□□□□ 0.51
CLTC-213ENST00000584313 CT47B1P0C2W7 299 aaPredicted RBP18.22■□□□□ 0.51
CLTC-213ENST00000584313 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
CLTC-213ENST00000584313 TBC1D16Q8TBP0 767 aa18.22■□□□□ 0.51
CLTC-213ENST00000584313 SRCIN1Q9C0H9 1055 aa18.22■□□□□ 0.51
CLTC-213ENST00000584313 ANKIB1Q9P2G1 1089 aa18.22■□□□□ 0.51
CLTC-213ENST00000584313 PTPRCP08575 1304 aa18.22■□□□□ 0.51
CLTC-213ENST00000584313 GRM8O00222 908 aa18.21■□□□□ 0.51
CLTC-213ENST00000584313 POTEIP0CG38 1075 aa18.21■□□□□ 0.51
CLTC-213ENST00000584313 POTEJP0CG39 1038 aa18.21■□□□□ 0.51
CLTC-213ENST00000584313 APLP1P51693 650 aa18.21■□□□□ 0.51
CLTC-213ENST00000584313 CXCL9Q07325 125 aa18.21■□□□□ 0.51
CLTC-213ENST00000584313 FAM161AQ3B820 660 aa18.21■□□□□ 0.51
CLTC-213ENST00000584313 EYA3Q99504 573 aa18.21■□□□□ 0.51
CLTC-213ENST00000584313 C9orf78Q9NZ63 289 aaPredicted RBP18.21■□□□□ 0.51
CLTC-213ENST00000584313 RIMBP2O15034 1052 aa18.2■□□□□ 0.5
CLTC-213ENST00000584313 UFL1O94874 794 aa18.2■□□□□ 0.5
CLTC-213ENST00000584313 ITGA6P23229 1130 aa18.2■□□□□ 0.5
CLTC-213ENST00000584313 EPHX2P34913 555 aa18.2■□□□□ 0.5
CLTC-213ENST00000584313 GPR101Q96P66 508 aaPredicted RBP18.2■□□□□ 0.5
CLTC-213ENST00000584313 SMC4Q9NTJ3 1288 aa18.2■□□□□ 0.5
CLTC-213ENST00000584313 BSDC1Q9NW68 430 aaPredicted RBP18.2■□□□□ 0.5
CLTC-213ENST00000584313 GGA1Q9UJY5 639 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms