RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	C3orf67	Q6ZVT6	689 aa		12.56	□□□□□ -0.4
EIF4A1-231	ENST00000584054	UBE3B	Q7Z3V4	1068 aa		12.56	□□□□□ -0.4
EIF4A1-231	ENST00000584054	ANKRD44	Q8N8A2	993 aa		12.56	□□□□□ -0.4
EIF4A1-231	ENST00000584054	TTLL11	Q8NHH1	800 aa		12.56	□□□□□ -0.4
EIF4A1-231	ENST00000584054	SUCLG2	Q96I99	432 aa		12.56	□□□□□ -0.4
EIF4A1-231	ENST00000584054	CHMP4B	Q9H444	224 aa	Known RBP	12.56	□□□□□ -0.4
EIF4A1-231	ENST00000584054	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.56	□□□□□ -0.4
EIF4A1-231	ENST00000584054	HDAC5	Q9UQL6	1122 aa		12.56	□□□□□ -0.4
EIF4A1-231	ENST00000584054	KCNA3	P22001	575 aa		12.55	□□□□□ -0.4
EIF4A1-231	ENST00000584054	TGFB2	P61812	414 aa		12.55	□□□□□ -0.4
EIF4A1-231	ENST00000584054	ITPRIP	Q8IWB1	547 aa		12.55	□□□□□ -0.4
EIF4A1-231	ENST00000584054	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.54	□□□□□ -0.4
EIF4A1-231	ENST00000584054	SRGN	P10124	158 aa		12.54	□□□□□ -0.4
EIF4A1-231	ENST00000584054	HCLS1	P14317	486 aa	Predicted RBP	12.54	□□□□□ -0.4
EIF4A1-231	ENST00000584054	ST5	P78524	1137 aa		12.54	□□□□□ -0.4
EIF4A1-231	ENST00000584054	BBX	Q8WY36	941 aa	Predicted RBP	12.54	□□□□□ -0.4
EIF4A1-231	ENST00000584054	CRBN	Q96SW2	442 aa		12.54	□□□□□ -0.4
EIF4A1-231	ENST00000584054	GNAI2	P04899	355 aa		12.53	□□□□□ -0.4
EIF4A1-231	ENST00000584054	UBTFL1	P0CB47	393 aa	Predicted RBP	12.53	□□□□□ -0.4
EIF4A1-231	ENST00000584054	PDE6B	P35913	854 aa		12.53	□□□□□ -0.4
EIF4A1-231	ENST00000584054	RFX5	P48382	616 aa	Predicted RBP	12.53	□□□□□ -0.4
EIF4A1-231	ENST00000584054	CTSW	P56202	376 aa		12.53	□□□□□ -0.4
EIF4A1-231	ENST00000584054	JARID2	Q92833	1246 aa	Predicted RBP	12.53	□□□□□ -0.4
EIF4A1-231	ENST00000584054	NLRP3	Q96P20	1036 aa		12.53	□□□□□ -0.4
EIF4A1-231	ENST00000584054	CRAMP1	Q96RY5	1269 aa		12.53	□□□□□ -0.4
EIF4A1-231	ENST00000584054	ATP8B2	P98198	1209 aa		12.52	□□□□□ -0.41
EIF4A1-231	ENST00000584054	POLA2	Q14181	598 aa		12.52	□□□□□ -0.41
EIF4A1-231	ENST00000584054	SIRT2	Q8IXJ6	389 aa		12.52	□□□□□ -0.41
EIF4A1-231	ENST00000584054	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.52	□□□□□ -0.41
EIF4A1-231	ENST00000584054	SSH3	Q8TE77	659 aa		12.52	□□□□□ -0.41
EIF4A1-231	ENST00000584054	BICC1	Q9H694	974 aa	Known RBP	12.52	□□□□□ -0.41
EIF4A1-231	ENST00000584054	LRRFIP2	Q9Y608	721 aa	Known RBP	12.52	□□□□□ -0.41
EIF4A1-231	ENST00000584054	FAM177B	A6PVY3	158 aa		12.51	□□□□□ -0.41
EIF4A1-231	ENST00000584054	ERICH6B	Q5W0A0	696 aa		12.51	□□□□□ -0.41
EIF4A1-231	ENST00000584054	STYK1	Q6J9G0	422 aa		12.51	□□□□□ -0.41
EIF4A1-231	ENST00000584054	CEP85	Q6P2H3	762 aa		12.51	□□□□□ -0.41
EIF4A1-231	ENST00000584054	LMBR1L	Q6UX01	489 aa		12.51	□□□□□ -0.41
EIF4A1-231	ENST00000584054	CCDC24	Q8N4L8	307 aa		12.51	□□□□□ -0.41
EIF4A1-231	ENST00000584054	EXOC6	Q8TAG9	804 aa		12.51	□□□□□ -0.41
EIF4A1-231	ENST00000584054	DLEC1	Q9Y238	1755 aa		12.51	□□□□□ -0.41
EIF4A1-231	ENST00000584054	SRCAP	Q6ZRS2	3230 aa		12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	NPR1	P16066	1061 aa		12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	GTF2E1	P29083	439 aa	Predicted RBP	12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	CCDC152	Q4G0S7	254 aa		12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	C7orf43	Q8WVR3	580 aa		12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	MASTL	Q96GX5	879 aa		12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	PCDHB15	Q9Y5E8	787 aa		12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	SNED1	Q8TER0	1413 aa		12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	COL4A1	P02462	1669 aa		12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	COL11A2	P13942	1736 aa	Predicted RBP	12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	MYH3	P11055	1940 aa		12.5	□□□□□ -0.41
EIF4A1-231	ENST00000584054	PTPN12	Q05209	780 aa	Known RBP	12.49	□□□□□ -0.41
EIF4A1-231	ENST00000584054	MKRN4P	Q13434	485 aa	Predicted RBP	12.49	□□□□□ -0.41
EIF4A1-231	ENST00000584054	RTL5	Q5HYW3	569 aa	Predicted RBP	12.49	□□□□□ -0.41
EIF4A1-231	ENST00000584054	GREM2	Q9H772	168 aa		12.49	□□□□□ -0.41
EIF4A1-231	ENST00000584054	COPRS	Q9NQ92	184 aa		12.49	□□□□□ -0.41
EIF4A1-231	ENST00000584054	NOP58	Q9Y2X3	529 aa	Known RBP	12.49	□□□□□ -0.41
EIF4A1-231	ENST00000584054	BRCA1	P38398	1863 aa	Known RBP	12.48	□□□□□ -0.41
EIF4A1-231	ENST00000584054	PNMA6E	A0A0J9YXQ4	647 aa		12.48	□□□□□ -0.41
EIF4A1-231	ENST00000584054		H0YIN7	160 aa		12.48	□□□□□ -0.41
EIF4A1-231	ENST00000584054	BBOX1	O75936	387 aa		12.48	□□□□□ -0.41
EIF4A1-231	ENST00000584054	DPEP1	P16444	411 aa		12.48	□□□□□ -0.41
EIF4A1-231	ENST00000584054	C2CD5	Q86YS7	1000 aa		12.48	□□□□□ -0.41
EIF4A1-231	ENST00000584054	SYT17	Q9BSW7	474 aa		12.48	□□□□□ -0.41
EIF4A1-231	ENST00000584054	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.48	□□□□□ -0.41
EIF4A1-231	ENST00000584054	ITGA6	P23229	1130 aa		12.47	□□□□□ -0.41
EIF4A1-231	ENST00000584054	CHRNA5	P30532	468 aa		12.47	□□□□□ -0.41
EIF4A1-231	ENST00000584054	ALDH1B1	P30837	517 aa		12.47	□□□□□ -0.41
EIF4A1-231	ENST00000584054	HDAC1	Q13547	482 aa	Predicted RBP	12.47	□□□□□ -0.41
EIF4A1-231	ENST00000584054	GRAP	Q13588	217 aa		12.47	□□□□□ -0.41
EIF4A1-231	ENST00000584054	FAM161A	Q3B820	660 aa		12.47	□□□□□ -0.41
EIF4A1-231	ENST00000584054	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.47	□□□□□ -0.41
EIF4A1-231	ENST00000584054	TMC4	Q7Z404	712 aa		12.47	□□□□□ -0.41
EIF4A1-231	ENST00000584054	GRAPL	Q8TC17	118 aa	Predicted RBP	12.47	□□□□□ -0.41
EIF4A1-231	ENST00000584054	SEC31B	Q9NQW1	1179 aa		12.47	□□□□□ -0.41
EIF4A1-231	ENST00000584054	RPS8	P62241	208 aa	Known RBP	12.46	□□□□□ -0.41
EIF4A1-231	ENST00000584054	NLGN2	Q8NFZ4	835 aa		12.46	□□□□□ -0.41
EIF4A1-231	ENST00000584054	CELF1	Q92879	486 aa	Known RBP	12.46	□□□□□ -0.41
EIF4A1-231	ENST00000584054	CNKSR1	Q969H4	720 aa		12.46	□□□□□ -0.41
EIF4A1-231	ENST00000584054	RBM17	Q96I25	401 aa	Known RBP	12.46	□□□□□ -0.41
EIF4A1-231	ENST00000584054	C1orf115	Q9H7X2	142 aa		12.46	□□□□□ -0.41
EIF4A1-231	ENST00000584054	BSDC1	Q9NW68	430 aa	Predicted RBP	12.46	□□□□□ -0.41
EIF4A1-231	ENST00000584054	RIPOR2	Q9Y4F9	1068 aa		12.46	□□□□□ -0.41
EIF4A1-231	ENST00000584054		A0A0G2JLW4	131 aa		12.45	□□□□□ -0.42
EIF4A1-231	ENST00000584054	ANKRD18B	A2A2Z9	1011 aa		12.45	□□□□□ -0.42
EIF4A1-231	ENST00000584054	CIAO1	O76071	339 aa		12.45	□□□□□ -0.42
EIF4A1-231	ENST00000584054	IFIT5	Q13325	482 aa	Known RBP	12.45	□□□□□ -0.42
EIF4A1-231	ENST00000584054	DDX46	Q7L014	1031 aa	Known RBP	12.45	□□□□□ -0.42
EIF4A1-231	ENST00000584054	LRRC37A	A6NMS7	1700 aa		12.45	□□□□□ -0.42
EIF4A1-231	ENST00000584054	SRGAP3	O43295	1099 aa		12.44	□□□□□ -0.42
EIF4A1-231	ENST00000584054	CCDC57	Q2TAC2	916 aa		12.44	□□□□□ -0.42
EIF4A1-231	ENST00000584054	ATG9A	Q7Z3C6	839 aa		12.44	□□□□□ -0.42
EIF4A1-231	ENST00000584054	SP8	Q8IXZ3	490 aa		12.44	□□□□□ -0.42
EIF4A1-231	ENST00000584054	TTLL6	Q8N841	843 aa		12.44	□□□□□ -0.42
EIF4A1-231	ENST00000584054	CDC5L	Q99459	802 aa	Known RBP	12.44	□□□□□ -0.42
EIF4A1-231	ENST00000584054	DCTPP1	Q9H773	170 aa		12.44	□□□□□ -0.42
EIF4A1-231	ENST00000584054	PIM2	Q9P1W9	311 aa		12.44	□□□□□ -0.42
EIF4A1-231	ENST00000584054	ATP6V0A2	Q9Y487	856 aa		12.44	□□□□□ -0.42
EIF4A1-231	ENST00000584054	LTBP1	Q14766	1721 aa		12.43	□□□□□ -0.42
EIF4A1-231	ENST00000584054	EYA2	O00167	538 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms