RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 LRRC24Q50LG9 513 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 HSP90AB4PQ58FF6 505 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 TNNI3KQ59H18 835 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 CASC1Q6TDU7 716 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 CWC27Q6UX04 472 aaKnown RBP5.64□□□□□ -1.51
NUP85-213ENST00000579838 NOL8Q76FK4 1167 aaKnown RBP5.64□□□□□ -1.51
NUP85-213ENST00000579838 ERC1Q8IUD2 1116 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 CNTROBQ8N137 903 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 CLASRPQ8N2M8 674 aaKnown RBP5.64□□□□□ -1.51
NUP85-213ENST00000579838 FAM227BQ96M60 508 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 DBNDD2Q9BQY9 259 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 PUS3Q9BZE2 481 aaKnown RBP5.64□□□□□ -1.51
NUP85-213ENST00000579838 CWC25Q9NXE8 425 aaPredicted RBP5.64□□□□□ -1.51
NUP85-213ENST00000579838 ZBTB1Q9Y2K1 713 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 TAF6LQ9Y6J9 622 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 FPGT-TNNI3KV9GXZ4 949 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 SPATA31A1Q5TZJ5 1347 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 MED23Q9ULK4 1368 aa5.64□□□□□ -1.51
NUP85-213ENST00000579838 TNRC6CQ9HCJ0 1690 aaKnown RBP5.63□□□□□ -1.51
NUP85-213ENST00000579838 NUTM2BA6NNL0 878 aaPredicted RBP5.63□□□□□ -1.51
NUP85-213ENST00000579838 NUTM2EB1AL46 878 aaPredicted RBP5.63□□□□□ -1.51
NUP85-213ENST00000579838 ST3GAL1Q11201 340 aa5.63□□□□□ -1.51
NUP85-213ENST00000579838 GSE1Q14687 1217 aa5.63□□□□□ -1.51
NUP85-213ENST00000579838 ZNF589Q86UQ0 364 aaPredicted RBP5.63□□□□□ -1.51
NUP85-213ENST00000579838 NUTM2AQ8IVF1 878 aaPredicted RBP5.63□□□□□ -1.51
NUP85-213ENST00000579838 MARCH10Q8NA82 808 aaPredicted RBP5.63□□□□□ -1.51
NUP85-213ENST00000579838 ACSBG1Q96GR2 724 aa5.63□□□□□ -1.51
NUP85-213ENST00000579838 TTC14Q96N46 770 aa5.63□□□□□ -1.51
NUP85-213ENST00000579838 LARP6Q9BRS8 491 aaKnown RBP5.63□□□□□ -1.51
NUP85-213ENST00000579838 UPF3BQ9BZI7 483 aaKnown RBP5.63□□□□□ -1.51
NUP85-213ENST00000579838 BOLA2Q9H3K6 86 aa5.63□□□□□ -1.51
NUP85-213ENST00000579838 CIZ1Q9ULV3 898 aaPredicted RBP5.63□□□□□ -1.51
NUP85-213ENST00000579838 RPAP1Q9BWH6 1393 aaPredicted RBP5.63□□□□□ -1.51
NUP85-213ENST00000579838 BCL9LQ86UU0 1499 aa5.63□□□□□ -1.51
NUP85-213ENST00000579838 BRWD3Q6RI45 1802 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 GPTP24298 496 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 PRIM1P49642 420 aaKnown RBP5.62□□□□□ -1.51
NUP85-213ENST00000579838 NEK4P51957 841 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 PIP4K2BP78356 416 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 TCIRG1Q13488 830 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 ITPK1Q13572 414 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 CUL4AQ13619 759 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 ADCK5Q3MIX3 580 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 CCDC129Q6ZRS4 1044 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 VSIG10Q8N0Z9 540 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 CCDC191Q8NCU4 936 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 KCNB2Q92953 911 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 EVI5LQ96CN4 794 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 TMX3Q96JJ7 454 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 CCDC85AQ96PX6 553 aaPredicted RBP5.62□□□□□ -1.51
NUP85-213ENST00000579838 SEC62Q99442 399 aaKnown RBP5.62□□□□□ -1.51
NUP85-213ENST00000579838 SNRKQ9NRH2 765 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 CHMP3Q9Y3E7 222 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 ZNF330Q9Y3S2 320 aaPredicted RBP5.62□□□□□ -1.51
NUP85-213ENST00000579838 CCDC9Q9Y3X0 531 aaKnown RBP5.62□□□□□ -1.51
NUP85-213ENST00000579838 SPATA31A5Q5VU36 1347 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 CCDC171Q6TFL3 1326 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 MAP3K15Q6ZN16 1313 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 UBN2Q6ZU65 1347 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 SPATA31A7Q8IWB4 1347 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 CHD4Q14839 1912 aa5.62□□□□□ -1.51
NUP85-213ENST00000579838 A0A0G2JLW4 131 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 POTEB2H3BUK9 544 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 EXOC5O00471 708 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 BAG4O95429 457 aaKnown RBP5.61□□□□□ -1.51
NUP85-213ENST00000579838 ATP5JP18859 108 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 ADORA1P30542 326 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 ANAPC15P60006 121 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 NECTIN1Q15223 517 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 PRPF40BQ6NWY9 871 aaKnown RBP5.61□□□□□ -1.51
NUP85-213ENST00000579838 INTS5Q6P9B9 1019 aaKnown RBP5.61□□□□□ -1.51
NUP85-213ENST00000579838 SMIM5Q71RC9 77 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 RUFY3Q7L099 469 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 PTF1AQ7RTS3 328 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 NLRP10Q86W26 655 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 PALLDQ8WX93 1383 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 FAM89AQ96GI7 184 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 DIAPH3Q9NSV4 1193 aa5.61□□□□□ -1.51
NUP85-213ENST00000579838 RBM8AQ9Y5S9 174 aaKnown RBP5.61□□□□□ -1.51
NUP85-213ENST00000579838 TCHHQ07283 1943 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 MYH13Q9UKX3 1938 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 RFX7Q2KHR2 1363 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 CDHR2Q9BYE9 1310 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 EYA2O00167 538 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 SLC27A2O14975 620 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 EPB41L2O43491 1005 aaKnown RBP5.6□□□□□ -1.51
NUP85-213ENST00000579838 KCNQ2O43526 872 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 ST18O60284 1047 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 TRAK2O60296 914 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 EIF5BO60841 1220 aaKnown RBP5.6□□□□□ -1.51
NUP85-213ENST00000579838 PCCAP05165 728 aaPredicted RBP5.6□□□□□ -1.51
NUP85-213ENST00000579838 CSF1RP07333 972 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 MCCP23508 829 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 AK2P54819 239 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 TIMM10P62072 90 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 SCARF1Q14162 830 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 FOXD4L5Q5VV16 416 aaPredicted RBP5.6□□□□□ -1.51
NUP85-213ENST00000579838 CREB3L3Q68CJ9 461 aa5.6□□□□□ -1.51
NUP85-213ENST00000579838 GIGYF2Q6Y7W6 1299 aaKnown RBP5.6□□□□□ -1.51
NUP85-213ENST00000579838 KIF6Q6ZMV9 814 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms