RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 CCDC30Q5VVM6 783 aa29.48■■■□□ 2.31
CDKN2A-212ENST00000578845 DPP8Q6V1X1 898 aaPredicted RBP29.48■■■□□ 2.31
CDKN2A-212ENST00000578845 NIM1KQ8IY84 436 aa29.48■■■□□ 2.31
CDKN2A-212ENST00000578845 AOC3Q16853 763 aa29.47■■■□□ 2.31
CDKN2A-212ENST00000578845 TSPYL6Q8N831 410 aa29.47■■■□□ 2.31
CDKN2A-212ENST00000578845 ZNF428Q96B54 188 aa29.47■■■□□ 2.31
CDKN2A-212ENST00000578845 CREBZFQ9NS37 354 aa29.47■■■□□ 2.31
CDKN2A-212ENST00000578845 IL16Q14005 1332 aa29.46■■■□□ 2.31
CDKN2A-212ENST00000578845 LTBP1Q14766 1721 aa29.46■■■□□ 2.31
CDKN2A-212ENST00000578845 MPNDQ8N594 471 aa29.46■■■□□ 2.31
CDKN2A-212ENST00000578845 MRS2Q9HD23 443 aa29.46■■■□□ 2.31
CDKN2A-212ENST00000578845 DUOX1Q9NRD9 1551 aa29.46■■■□□ 2.31
CDKN2A-212ENST00000578845 ANP32CO43423 234 aa29.45■■■□□ 2.31
CDKN2A-212ENST00000578845 SCNN1DP51172 638 aa29.45■■■□□ 2.31
CDKN2A-212ENST00000578845 EAPPQ56P03 285 aaPredicted RBP29.45■■■□□ 2.31
CDKN2A-212ENST00000578845 ZBTB38Q8NAP3 1195 aaPredicted RBP29.45■■■□□ 2.31
CDKN2A-212ENST00000578845 TSR2Q969E8 191 aaKnown RBP29.45■■■□□ 2.31
CDKN2A-212ENST00000578845 GJA3Q9Y6H8 435 aa29.45■■■□□ 2.31
CDKN2A-212ENST00000578845 IRS4O14654 1257 aaPredicted RBP29.44■■■□□ 2.3
CDKN2A-212ENST00000578845 ITGBL1O95965 494 aaPredicted RBP29.44■■■□□ 2.3
CDKN2A-212ENST00000578845 KIAA2012Q0VF49 1180 aa29.44■■■□□ 2.3
CDKN2A-212ENST00000578845 CCDC191Q8NCU4 936 aa29.44■■■□□ 2.3
CDKN2A-212ENST00000578845 TAF1P21675 1872 aa29.44■■■□□ 2.3
CDKN2A-212ENST00000578845 ZNRF3Q9ULT6 936 aa29.43■■■□□ 2.3
CDKN2A-212ENST00000578845 DDX58O95786 925 aaKnown RBP29.42■■■□□ 2.3
CDKN2A-212ENST00000578845 CELF1Q92879 486 aaKnown RBP29.42■■■□□ 2.3
CDKN2A-212ENST00000578845 MYD88Q99836 296 aa29.42■■■□□ 2.3
CDKN2A-212ENST00000578845 METTL22Q9BUU2 404 aaPredicted RBP29.42■■■□□ 2.3
CDKN2A-212ENST00000578845 HSP90B1P14625 803 aaKnown RBP29.41■■■□□ 2.3
CDKN2A-212ENST00000578845 LMOD1P29536 600 aaPredicted RBP29.41■■■□□ 2.3
CDKN2A-212ENST00000578845 COL4A1P02462 1669 aa29.4■■■□□ 2.3
CDKN2A-212ENST00000578845 PCCAP05165 728 aaPredicted RBP29.4■■■□□ 2.3
CDKN2A-212ENST00000578845 RTL5Q5HYW3 569 aaPredicted RBP29.4■■■□□ 2.3
CDKN2A-212ENST00000578845 CLEC11AQ9Y240 323 aa29.39■■■□□ 2.3
CDKN2A-212ENST00000578845 CXCL9Q07325 125 aa29.38■■■□□ 2.29
CDKN2A-212ENST00000578845 IFFO2Q5TF58 517 aa29.38■■■□□ 2.29
CDKN2A-212ENST00000578845 CWC25Q9NXE8 425 aaPredicted RBP29.38■■■□□ 2.29
CDKN2A-212ENST00000578845 EPS15P42566 896 aa29.37■■■□□ 2.29
CDKN2A-212ENST00000578845 TWISTNBQ3B726 338 aaPredicted RBP29.37■■■□□ 2.29
CDKN2A-212ENST00000578845 KSR2Q6VAB6 950 aa29.37■■■□□ 2.29
CDKN2A-212ENST00000578845 STK31Q9BXU1 1019 aa29.37■■■□□ 2.29
CDKN2A-212ENST00000578845 USP50Q70EL3 339 aaPredicted RBP29.36■■■□□ 2.29
CDKN2A-212ENST00000578845 CNTROBQ8N137 903 aa29.36■■■□□ 2.29
CDKN2A-212ENST00000578845 MAP3K2Q9Y2U5 619 aa29.36■■■□□ 2.29
CDKN2A-212ENST00000578845 CDHR2Q9BYE9 1310 aa29.36■■■□□ 2.29
CDKN2A-212ENST00000578845 RPS8P62241 208 aaKnown RBP29.35■■■□□ 2.29
CDKN2A-212ENST00000578845 MAP1SQ66K74 1059 aaPredicted RBP29.35■■■□□ 2.29
CDKN2A-212ENST00000578845 GPRC5DQ9NZD1 345 aa29.35■■■□□ 2.29
CDKN2A-212ENST00000578845 PI4KAP2A4QPH2 592 aa29.34■■■□□ 2.29
CDKN2A-212ENST00000578845 TMEM88BA6NKF7 163 aa29.34■■■□□ 2.29
CDKN2A-212ENST00000578845 CIAPIN1Q6FI81 312 aa29.34■■■□□ 2.29
CDKN2A-212ENST00000578845 WDR63Q8IWG1 891 aa29.34■■■□□ 2.29
CDKN2A-212ENST00000578845 PI4KAP1Q8N8J0 262 aa29.34■■■□□ 2.29
CDKN2A-212ENST00000578845 CNTNAP1P78357 1384 aa29.34■■■□□ 2.29
CDKN2A-212ENST00000578845 PDE8AO60658 829 aa29.33■■■□□ 2.29
CDKN2A-212ENST00000578845 IGKV5-2P06315 115 aa29.33■■■□□ 2.29
CDKN2A-212ENST00000578845 NSFL1CQ9UNZ2 370 aaKnown RBP29.33■■■□□ 2.29
CDKN2A-212ENST00000578845 FANCIQ9NVI1 1328 aa29.33■■■□□ 2.29
CDKN2A-212ENST00000578845 CCDC152Q4G0S7 254 aa29.32■■■□□ 2.28
CDKN2A-212ENST00000578845 ADARB2Q9NS39 739 aaKnown RBP29.32■■■□□ 2.28
CDKN2A-212ENST00000578845 YDJCA8MPS7 323 aa29.31■■■□□ 2.28
CDKN2A-212ENST00000578845 GMPSP49915 693 aaPredicted RBP29.31■■■□□ 2.28
CDKN2A-212ENST00000578845 GPSM2P81274 684 aa29.31■■■□□ 2.28
CDKN2A-212ENST00000578845 TNIP1Q15025 636 aa29.31■■■□□ 2.28
CDKN2A-212ENST00000578845 WASHC4Q2M389 1173 aa29.31■■■□□ 2.28
CDKN2A-212ENST00000578845 SEC31BQ9NQW1 1179 aa29.31■■■□□ 2.28
CDKN2A-212ENST00000578845 PODXL2Q9NZ53 605 aa29.31■■■□□ 2.28
CDKN2A-212ENST00000578845 POLLQ9UGP5 575 aa29.31■■■□□ 2.28
CDKN2A-212ENST00000578845 MKRN1Q9UHC7 482 aaKnown RBP29.3■■■□□ 2.28
CDKN2A-212ENST00000578845 RAD17O75943 681 aa29.29■■■□□ 2.28
CDKN2A-212ENST00000578845 G2E3Q7L622 706 aa29.29■■■□□ 2.28
CDKN2A-212ENST00000578845 SLC4A2P04920 1241 aa29.28■■■□□ 2.28
CDKN2A-212ENST00000578845 NEXNQ0ZGT2 675 aa29.28■■■□□ 2.28
CDKN2A-212ENST00000578845 TBC1D16Q8TBP0 767 aa29.28■■■□□ 2.28
CDKN2A-212ENST00000578845 JARID2Q92833 1246 aaPredicted RBP29.27■■■□□ 2.28
CDKN2A-212ENST00000578845 EYA3Q99504 573 aa29.27■■■□□ 2.28
CDKN2A-212ENST00000578845 NEURL1BA8MQ27 555 aa29.26■■■□□ 2.27
CDKN2A-212ENST00000578845 C6orf229H3BNL8 230 aa29.26■■■□□ 2.27
CDKN2A-212ENST00000578845 HSPA1AP0DMV8 641 aaKnown RBP29.26■■■□□ 2.27
CDKN2A-212ENST00000578845 HSPA1BP0DMV9 641 aaKnown RBP29.26■■■□□ 2.27
CDKN2A-212ENST00000578845 CTSWP56202 376 aa29.25■■■□□ 2.27
CDKN2A-212ENST00000578845 FLIIQ13045 1269 aa29.25■■■□□ 2.27
CDKN2A-212ENST00000578845 RASSF10A6NK89 507 aa29.24■■■□□ 2.27
CDKN2A-212ENST00000578845 VAMP4O75379 141 aa29.24■■■□□ 2.27
CDKN2A-212ENST00000578845 CWF19L2Q2TBE0 894 aaKnown RBP29.24■■■□□ 2.27
CDKN2A-212ENST00000578845 BCL2L13Q9BXK5 485 aa29.24■■■□□ 2.27
CDKN2A-212ENST00000578845 PGAP2Q9UHJ9 254 aa29.24■■■□□ 2.27
CDKN2A-212ENST00000578845 RTL9Q8NET4 1388 aa29.24■■■□□ 2.27
CDKN2A-212ENST00000578845 CACNA1FO60840 1977 aa29.23■■■□□ 2.27
CDKN2A-212ENST00000578845 DPF2Q92785 391 aa29.23■■■□□ 2.27
CDKN2A-212ENST00000578845 DBNDD1Q9H9R9 158 aa29.23■■■□□ 2.27
CDKN2A-212ENST00000578845 RIMBP2O15034 1052 aa29.22■■■□□ 2.27
CDKN2A-212ENST00000578845 TTLL11Q8NHH1 800 aa29.22■■■□□ 2.27
CDKN2A-212ENST00000578845 ZC3H15Q8WU90 426 aaKnown RBP29.22■■■□□ 2.27
CDKN2A-212ENST00000578845 SALL2Q9Y467 1007 aaPredicted RBP29.22■■■□□ 2.27
CDKN2A-212ENST00000578845 H7C1W4 665 aa29.21■■■□□ 2.27
CDKN2A-212ENST00000578845 PSMD14O00487 310 aa29.21■■■□□ 2.27
CDKN2A-212ENST00000578845 ECE2O60344 883 aa29.21■■■□□ 2.27
CDKN2A-212ENST00000578845 ANKRD18AQ8IVF6 992 aa29.21■■■□□ 2.27
CDKN2A-212ENST00000578845 CCDC85AQ96PX6 553 aaPredicted RBP29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms