RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 CCDC152Q4G0S7 254 aa18.22■□□□□ 0.51
NPLOC4-218ENST00000574964 STYK1Q6J9G0 422 aa18.22■□□□□ 0.51
NPLOC4-218ENST00000574964 DDX46Q7L014 1031 aaKnown RBP18.22■□□□□ 0.51
NPLOC4-218ENST00000574964 CNKSR1Q969H4 720 aa18.22■□□□□ 0.51
NPLOC4-218ENST00000574964 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
NPLOC4-218ENST00000574964 MEIS3Q99687 375 aa18.22■□□□□ 0.51
NPLOC4-218ENST00000574964 PLA2G12BQ9BX93 195 aa18.22■□□□□ 0.51
NPLOC4-218ENST00000574964 CHMP3Q9Y3E7 222 aa18.22■□□□□ 0.51
NPLOC4-218ENST00000574964 ALDH1B1P30837 517 aa18.21■□□□□ 0.51
NPLOC4-218ENST00000574964 CTSWP56202 376 aa18.21■□□□□ 0.51
NPLOC4-218ENST00000574964 CRY2Q49AN0 593 aa18.21■□□□□ 0.51
NPLOC4-218ENST00000574964 C20orf194Q5TEA3 1177 aa18.21■□□□□ 0.51
NPLOC4-218ENST00000574964 PELP1Q8IZL8 1130 aaKnown RBP18.21■□□□□ 0.51
NPLOC4-218ENST00000574964 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
NPLOC4-218ENST00000574964 CHMP4BQ9H444 224 aaKnown RBP18.21■□□□□ 0.51
NPLOC4-218ENST00000574964 DDX19BQ9UMR2 479 aa18.21■□□□□ 0.51
NPLOC4-218ENST00000574964 TTLL6Q8N841 843 aa18.2■□□□□ 0.5
NPLOC4-218ENST00000574964 SLX4Q8IY92 1834 aa18.19■□□□□ 0.5
NPLOC4-218ENST00000574964 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
NPLOC4-218ENST00000574964 LMBR1LQ6UX01 489 aa18.19■□□□□ 0.5
NPLOC4-218ENST00000574964 TTLL11Q8NHH1 800 aa18.19■□□□□ 0.5
NPLOC4-218ENST00000574964 LRRFIP2Q9Y608 721 aaKnown RBP18.19■□□□□ 0.5
NPLOC4-218ENST00000574964 SPEF2Q9C093 1822 aa18.19■□□□□ 0.5
NPLOC4-218ENST00000574964 DCAF8L1A6NGE4 600 aa18.18■□□□□ 0.5
NPLOC4-218ENST00000574964 GNAI2P04899 355 aa18.18■□□□□ 0.5
NPLOC4-218ENST00000574964 KCNA3P22001 575 aa18.18■□□□□ 0.5
NPLOC4-218ENST00000574964 HOXA10P31260 410 aaPredicted RBP18.18■□□□□ 0.5
NPLOC4-218ENST00000574964 FOXO4P98177 505 aa18.18■□□□□ 0.5
NPLOC4-218ENST00000574964 CRAMP1Q96RY5 1269 aa18.18■□□□□ 0.5
NPLOC4-218ENST00000574964 BCS1LQ9Y276 419 aa18.18■□□□□ 0.5
NPLOC4-218ENST00000574964 ARFGEF1Q9Y6D6 1849 aa18.18■□□□□ 0.5
NPLOC4-218ENST00000574964 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
NPLOC4-218ENST00000574964 EPHA10Q5JZY3 1008 aa18.17■□□□□ 0.5
NPLOC4-218ENST00000574964 BICC1Q9H694 974 aaKnown RBP18.17■□□□□ 0.5
NPLOC4-218ENST00000574964 GREM2Q9H772 168 aa18.17■□□□□ 0.5
NPLOC4-218ENST00000574964 ANKRD18BA2A2Z9 1011 aa18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 CSF1RP07333 972 aa18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 GRAPQ13588 217 aa18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 GPR162Q16538 588 aa18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 CCDC57Q2TAC2 916 aa18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 TAF7LQ5H9L4 462 aa18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 GRAPLQ8TC17 118 aaPredicted RBP18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 KAZALD1Q96I82 304 aa18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 CDC5LQ99459 802 aaKnown RBP18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 TMX4Q9H1E5 349 aaPredicted RBP18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 ZNF219Q9P2Y4 722 aaPredicted RBP18.16■□□□□ 0.5
NPLOC4-218ENST00000574964 ITGA6P23229 1130 aa18.15■□□□□ 0.5
NPLOC4-218ENST00000574964 IFIT5Q13325 482 aaKnown RBP18.15■□□□□ 0.5
NPLOC4-218ENST00000574964 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
NPLOC4-218ENST00000574964 SEC31BQ9NQW1 1179 aa18.15■□□□□ 0.5
NPLOC4-218ENST00000574964 BBOX1O75936 387 aa18.14■□□□□ 0.49
NPLOC4-218ENST00000574964 RPS8P62241 208 aaKnown RBP18.14■□□□□ 0.49
NPLOC4-218ENST00000574964 RABL6Q3YEC7 729 aaPredicted RBP18.14■□□□□ 0.49
NPLOC4-218ENST00000574964 ANKRD18AQ8IVF6 992 aa18.14■□□□□ 0.49
NPLOC4-218ENST00000574964 CRBNQ96SW2 442 aa18.14■□□□□ 0.49
NPLOC4-218ENST00000574964 C1orf115Q9H7X2 142 aa18.14■□□□□ 0.49
NPLOC4-218ENST00000574964 RTL9Q8NET4 1388 aa18.14■□□□□ 0.49
NPLOC4-218ENST00000574964 PPEF1O14829 653 aaPredicted RBP18.13■□□□□ 0.49
NPLOC4-218ENST00000574964 IGHMBP2P38935 993 aaKnown RBP18.13■□□□□ 0.49
NPLOC4-218ENST00000574964 ANKRD44Q8N8A2 993 aa18.13■□□□□ 0.49
NPLOC4-218ENST00000574964 CELF1Q92879 486 aaKnown RBP18.13■□□□□ 0.49
NPLOC4-218ENST00000574964 C21orf2O43822 256 aa18.12■□□□□ 0.49
NPLOC4-218ENST00000574964 TMC4Q7Z404 712 aa18.12■□□□□ 0.49
NPLOC4-218ENST00000574964 MPHOSPH8Q99549 860 aa18.12■□□□□ 0.49
NPLOC4-218ENST00000574964 SOGA3Q5TF21 947 aa18.11■□□□□ 0.49
NPLOC4-218ENST00000574964 CCDC88AQ3V6T2 1871 aa18.1■□□□□ 0.49
NPLOC4-218ENST00000574964 SRGAP3O43295 1099 aa18.1■□□□□ 0.49
NPLOC4-218ENST00000574964 ZBTB40Q9NUA8 1239 aa18.1■□□□□ 0.49
NPLOC4-218ENST00000574964 YBX3P16989 372 aaKnown RBP eCLIP18.09■□□□□ 0.49
NPLOC4-218ENST00000574964 IRX6P78412 446 aaPredicted RBP18.09■□□□□ 0.49
NPLOC4-218ENST00000574964 CC2D2BQ6DHV5 1058 aa18.09■□□□□ 0.49
NPLOC4-218ENST00000574964 SP8Q8IXZ3 490 aa18.09■□□□□ 0.49
NPLOC4-218ENST00000574964 ZNF594Q96JF6 807 aaPredicted RBP18.09■□□□□ 0.49
NPLOC4-218ENST00000574964 CNNM1Q9NRU3 951 aa18.09■□□□□ 0.49
NPLOC4-218ENST00000574964 ATP6V0A2Q9Y487 856 aa18.09■□□□□ 0.49
NPLOC4-218ENST00000574964 GRIN3BO60391 1043 aa18.08■□□□□ 0.48
NPLOC4-218ENST00000574964 ATP8B2P98198 1209 aa18.08■□□□□ 0.48
NPLOC4-218ENST00000574964 CCDC93Q567U6 631 aa18.08■□□□□ 0.48
NPLOC4-218ENST00000574964 ARHGAP27Q6ZUM4 889 aa18.08■□□□□ 0.48
NPLOC4-218ENST00000574964 FER1L6Q2WGJ9 1857 aa18.07■□□□□ 0.48
NPLOC4-218ENST00000574964 COL4A1P02462 1669 aa18.07■□□□□ 0.48
NPLOC4-218ENST00000574964 LDHAL6AQ6ZMR3 332 aa18.07■□□□□ 0.48
NPLOC4-218ENST00000574964 BSDC1Q9NW68 430 aaPredicted RBP18.07■□□□□ 0.48
NPLOC4-218ENST00000574964 MTX1Q13505 466 aa18.06■□□□□ 0.48
NPLOC4-218ENST00000574964 OLFM4Q6UX06 510 aa18.06■□□□□ 0.48
NPLOC4-218ENST00000574964 RPAP2Q8IXW5 612 aaPredicted RBP18.06■□□□□ 0.48
NPLOC4-218ENST00000574964 RTKN2Q8IZC4 609 aa18.06■□□□□ 0.48
NPLOC4-218ENST00000574964 C7orf43Q8WVR3 580 aa18.06■□□□□ 0.48
NPLOC4-218ENST00000574964 NSFL1CQ9UNZ2 370 aaKnown RBP18.06■□□□□ 0.48
NPLOC4-218ENST00000574964 PNMA6EA0A0J9YXQ4 647 aa18.05■□□□□ 0.48
NPLOC4-218ENST00000574964 HMMRO75330 724 aa18.05■□□□□ 0.48
NPLOC4-218ENST00000574964 NEFLP07196 543 aa18.05■□□□□ 0.48
NPLOC4-218ENST00000574964 GRIPAP1Q4V328 841 aa18.05■□□□□ 0.48
NPLOC4-218ENST00000574964 CEP85Q6P2H3 762 aa18.05■□□□□ 0.48
NPLOC4-218ENST00000574964 MPNDQ8N594 471 aa18.05■□□□□ 0.48
NPLOC4-218ENST00000574964 EXOC6Q8TAG9 804 aa18.05■□□□□ 0.48
NPLOC4-218ENST00000574964 KLHDC4Q8TBB5 520 aa18.05■□□□□ 0.48
NPLOC4-218ENST00000574964 ANKIB1Q9P2G1 1089 aa18.05■□□□□ 0.48
NPLOC4-218ENST00000574964 LRRC37AA6NMS7 1700 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms