RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 GPC2Q8N158 579 aa21.21■□□□□ 0.99
TMEM88-202ENST00000574668 MRPL50Q8N5N7 158 aaKnown RBP21.21■□□□□ 0.99
TMEM88-202ENST00000574668 PLBD2Q8NHP8 589 aa21.21■□□□□ 0.99
TMEM88-202ENST00000574668 SSH1Q8WYL5 1049 aa21.21■□□□□ 0.99
TMEM88-202ENST00000574668 SMC4Q9NTJ3 1288 aa21.21■□□□□ 0.99
TMEM88-202ENST00000574668 GIGYF2Q6Y7W6 1299 aaKnown RBP21.2■□□□□ 0.98
TMEM88-202ENST00000574668 ZNF34Q8IZ26 560 aa21.2■□□□□ 0.98
TMEM88-202ENST00000574668 JDP2Q8WYK2 163 aa21.2■□□□□ 0.98
TMEM88-202ENST00000574668 BCL2L13Q9BXK5 485 aa21.2■□□□□ 0.98
TMEM88-202ENST00000574668 GJA3Q9Y6H8 435 aa21.2■□□□□ 0.98
TMEM88-202ENST00000574668 NTSR2O95665 410 aa21.19■□□□□ 0.98
TMEM88-202ENST00000574668 HOXA10P31260 410 aaPredicted RBP21.19■□□□□ 0.98
TMEM88-202ENST00000574668 FKBP5Q13451 457 aaPredicted RBP21.19■□□□□ 0.98
TMEM88-202ENST00000574668 HSP90AB3PQ58FF7 597 aa21.19■□□□□ 0.98
TMEM88-202ENST00000574668 PNMA8AQ86V59 439 aaPredicted RBP21.19■□□□□ 0.98
TMEM88-202ENST00000574668 CNTROBQ8N137 903 aa21.19■□□□□ 0.98
TMEM88-202ENST00000574668 RARSP54136 660 aaKnown RBP21.18■□□□□ 0.98
TMEM88-202ENST00000574668 IBTKQ9P2D0 1353 aaPredicted RBP21.18■□□□□ 0.98
TMEM88-202ENST00000574668 RIC1Q4ADV7 1423 aa21.18■□□□□ 0.98
TMEM88-202ENST00000574668 LTBP1Q14766 1721 aa21.18■□□□□ 0.98
TMEM88-202ENST00000574668 PPEF1O14829 653 aaPredicted RBP21.17■□□□□ 0.98
TMEM88-202ENST00000574668 EIF6P56537 245 aaKnown RBP21.17■□□□□ 0.98
TMEM88-202ENST00000574668 CC2D2BQ6DHV5 1058 aa21.17■□□□□ 0.98
TMEM88-202ENST00000574668 KSR2Q6VAB6 950 aa21.17■□□□□ 0.98
TMEM88-202ENST00000574668 RBM17Q96I25 401 aaKnown RBP21.17■□□□□ 0.98
TMEM88-202ENST00000574668 LARGE2Q8N3Y3 721 aa21.16■□□□□ 0.98
TMEM88-202ENST00000574668 CACNA1FO60840 1977 aa21.16■□□□□ 0.98
TMEM88-202ENST00000574668 PI4KAP2A4QPH2 592 aa21.15■□□□□ 0.98
TMEM88-202ENST00000574668 EPS15P42566 896 aa21.15■□□□□ 0.98
TMEM88-202ENST00000574668 SCNN1DP51172 638 aa21.15■□□□□ 0.98
TMEM88-202ENST00000574668 FMR1Q06787 632 aaKnown RBP eCLIP21.15■□□□□ 0.98
TMEM88-202ENST00000574668 TCIRG1Q13488 830 aa21.15■□□□□ 0.98
TMEM88-202ENST00000574668 PI4KAP1Q8N8J0 262 aa21.15■□□□□ 0.98
TMEM88-202ENST00000574668 CRAMP1Q96RY5 1269 aa21.15■□□□□ 0.98
TMEM88-202ENST00000574668 MAP3K2Q9Y2U5 619 aa21.15■□□□□ 0.98
TMEM88-202ENST00000574668 MYD88Q99836 296 aa21.14■□□□□ 0.97
TMEM88-202ENST00000574668 RASSF10A6NK89 507 aa21.13■□□□□ 0.97
TMEM88-202ENST00000574668 LMOD1P29536 600 aaPredicted RBP21.13■□□□□ 0.97
TMEM88-202ENST00000574668 NEXNQ0ZGT2 675 aa21.13■□□□□ 0.97
TMEM88-202ENST00000574668 PARP10Q53GL7 1025 aa21.13■□□□□ 0.97
TMEM88-202ENST00000574668 PPP1R42Q7Z4L9 355 aa21.13■□□□□ 0.97
TMEM88-202ENST00000574668 DNAAF4Q8WXU2 420 aa21.13■□□□□ 0.97
TMEM88-202ENST00000574668 AIDAQ96BJ3 306 aa21.13■□□□□ 0.97
TMEM88-202ENST00000574668 METTL22Q9BUU2 404 aaPredicted RBP21.13■□□□□ 0.97
TMEM88-202ENST00000574668 PTPRCP08575 1304 aa21.12■□□□□ 0.97
TMEM88-202ENST00000574668 DEFB115Q30KQ5 88 aa21.12■□□□□ 0.97
TMEM88-202ENST00000574668 WBP1LQ9NX94 342 aa21.12■□□□□ 0.97
TMEM88-202ENST00000574668 ABT1Q9ULW3 272 aaKnown RBP21.12■□□□□ 0.97
TMEM88-202ENST00000574668 KIF16BQ96L93 1317 aa21.11■□□□□ 0.97
TMEM88-202ENST00000574668 ATP5J2-PTCD1G3V325 749 aa21.11■□□□□ 0.97
TMEM88-202ENST00000574668 PPIP5K2O43314 1243 aa21.11■□□□□ 0.97
TMEM88-202ENST00000574668 BCAR3O75815 825 aa21.11■□□□□ 0.97
TMEM88-202ENST00000574668 CTCFP49711 727 aaPredicted RBP21.11■□□□□ 0.97
TMEM88-202ENST00000574668 BRPF1P55201 1214 aaPredicted RBP21.11■□□□□ 0.97
TMEM88-202ENST00000574668 AOC3Q16853 763 aa21.11■□□□□ 0.97
TMEM88-202ENST00000574668 NLRP3Q96P20 1036 aa21.11■□□□□ 0.97
TMEM88-202ENST00000574668 UTP14AQ9BVJ6 771 aaKnown RBP21.11■□□□□ 0.97
TMEM88-202ENST00000574668 PRDM10Q9NQV6 1147 aa21.11■□□□□ 0.97
TMEM88-202ENST00000574668 NOB1Q9ULX3 412 aaKnown RBP21.11■□□□□ 0.97
TMEM88-202ENST00000574668 F6X3S4 739 aa21.1■□□□□ 0.97
TMEM88-202ENST00000574668 IPO8O15397 1037 aaKnown RBP21.1■□□□□ 0.97
TMEM88-202ENST00000574668 GRIPAP1Q4V328 841 aa21.1■□□□□ 0.97
TMEM88-202ENST00000574668 NIM1KQ8IY84 436 aa21.1■□□□□ 0.97
TMEM88-202ENST00000574668 ABCC4O15439 1325 aa21.09■□□□□ 0.97
TMEM88-202ENST00000574668 WDR33Q9C0J8 1336 aaKnown RBP21.09■□□□□ 0.97
TMEM88-202ENST00000574668 LBX1P52954 281 aa21.09■□□□□ 0.97
TMEM88-202ENST00000574668 SLC10A5Q5PT55 438 aa21.09■□□□□ 0.97
TMEM88-202ENST00000574668 FRAT1Q92837 279 aaPredicted RBP21.09■□□□□ 0.97
TMEM88-202ENST00000574668 ISCA1Q9BUE6 129 aa21.09■□□□□ 0.97
TMEM88-202ENST00000574668 API5Q9BZZ5 524 aaKnown RBP21.09■□□□□ 0.97
TMEM88-202ENST00000574668 RCAN3Q9UKA8 241 aa21.09■□□□□ 0.97
TMEM88-202ENST00000574668 ATP6V0A2Q9Y487 856 aa21.09■□□□□ 0.97
TMEM88-202ENST00000574668 TRAF5O00463 557 aa21.08■□□□□ 0.97
TMEM88-202ENST00000574668 SLC4A10Q6U841 1118 aa21.08■□□□□ 0.97
TMEM88-202ENST00000574668 NLRP10Q86W26 655 aa21.08■□□□□ 0.97
TMEM88-202ENST00000574668 HCLS1P14317 486 aaPredicted RBP21.07■□□□□ 0.96
TMEM88-202ENST00000574668 TRIM28Q13263 835 aaKnown RBP21.07■□□□□ 0.96
TMEM88-202ENST00000574668 USP50Q70EL3 339 aaPredicted RBP21.06■□□□□ 0.96
TMEM88-202ENST00000574668 CCDC191Q8NCU4 936 aa21.06■□□□□ 0.96
TMEM88-202ENST00000574668 TMX4Q9H1E5 349 aaPredicted RBP21.06■□□□□ 0.96
TMEM88-202ENST00000574668 CWC25Q9NXE8 425 aaPredicted RBP21.06■□□□□ 0.96
TMEM88-202ENST00000574668 TRMT112Q9UI30 125 aaKnown RBP21.06■□□□□ 0.96
TMEM88-202ENST00000574668 HSPA8P11142 646 aaKnown RBP21.05■□□□□ 0.96
TMEM88-202ENST00000574668 CXCL9Q07325 125 aa21.05■□□□□ 0.96
TMEM88-202ENST00000574668 GRM1Q13255 1194 aa21.05■□□□□ 0.96
TMEM88-202ENST00000574668 CST9Q5W186 159 aa21.05■□□□□ 0.96
TMEM88-202ENST00000574668 PAXIP1Q6ZW49 1069 aaPredicted RBP21.05■□□□□ 0.96
TMEM88-202ENST00000574668 LINS1Q8NG48 757 aa21.05■□□□□ 0.96
TMEM88-202ENST00000574668 ARHGAP45Q92619 1136 aa21.05■□□□□ 0.96
TMEM88-202ENST00000574668 GPRC5DQ9NZD1 345 aa21.05■□□□□ 0.96
TMEM88-202ENST00000574668 ZKSCAN2Q63HK3 967 aa21.04■□□□□ 0.96
TMEM88-202ENST00000574668 ZNRF3Q9ULT6 936 aa21.04■□□□□ 0.96
TMEM88-202ENST00000574668 LAMB2P55268 1798 aa21.03■□□□□ 0.96
TMEM88-202ENST00000574668 NEURL1BA8MQ27 555 aa21.03■□□□□ 0.96
TMEM88-202ENST00000574668 IGKV5-2P06315 115 aa21.03■□□□□ 0.96
TMEM88-202ENST00000574668 GMPSP49915 693 aaPredicted RBP21.03■□□□□ 0.96
TMEM88-202ENST00000574668 CWF19L2Q2TBE0 894 aaKnown RBP21.03■□□□□ 0.96
TMEM88-202ENST00000574668 BEND3Q5T5X7 828 aa21.03■□□□□ 0.96
TMEM88-202ENST00000574668 CYP4F22Q6NT55 531 aa21.03■□□□□ 0.96
TMEM88-202ENST00000574668 DPP8Q6V1X1 898 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms