RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 SP8Q8IXZ3 490 aa18.33■□□□□ 0.52
ABR-223ENST00000573895 GRAPLQ8TC17 118 aaPredicted RBP18.33■□□□□ 0.52
ABR-223ENST00000573895 MYH3P11055 1940 aa18.32■□□□□ 0.52
ABR-223ENST00000573895 TCERG1O14776 1098 aaKnown RBP18.32■□□□□ 0.52
ABR-223ENST00000573895 IARSP41252 1262 aaKnown RBP18.32■□□□□ 0.52
ABR-223ENST00000573895 VPS33BQ9H267 617 aa18.32■□□□□ 0.52
ABR-223ENST00000573895 ZNF277Q9NRM2 450 aaPredicted RBP18.32■□□□□ 0.52
ABR-223ENST00000573895 CDHR2Q9BYE9 1310 aa18.31■□□□□ 0.52
ABR-223ENST00000573895 IGKV5-2P06315 115 aa18.31■□□□□ 0.52
ABR-223ENST00000573895 CT47B1P0C2W7 299 aaPredicted RBP18.31■□□□□ 0.52
ABR-223ENST00000573895 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
ABR-223ENST00000573895 LRRC37AA6NMS7 1700 aa18.31■□□□□ 0.52
ABR-223ENST00000573895 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
ABR-223ENST00000573895 FKBP5Q13451 457 aaPredicted RBP18.3■□□□□ 0.52
ABR-223ENST00000573895 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
ABR-223ENST00000573895 RBM46Q8TBY0 533 aaKnown RBP18.3■□□□□ 0.52
ABR-223ENST00000573895 RTFDC1Q9BY42 306 aaPredicted RBP18.3■□□□□ 0.52
ABR-223ENST00000573895 CEP350Q5VT06 3117 aa18.3■□□□□ 0.52
ABR-223ENST00000573895 SCN4AP35499 1836 aa18.29■□□□□ 0.52
ABR-223ENST00000573895 PDE8AO60658 829 aa18.29■□□□□ 0.52
ABR-223ENST00000573895 RTL5Q5HYW3 569 aaPredicted RBP18.29■□□□□ 0.52
ABR-223ENST00000573895 SUPT20HQ8NEM7 779 aa18.29■□□□□ 0.52
ABR-223ENST00000573895 NEURL1BA8MQ27 555 aa18.28■□□□□ 0.52
ABR-223ENST00000573895 FZD9O00144 591 aa18.28■□□□□ 0.52
ABR-223ENST00000573895 DNAAF4Q8WXU2 420 aa18.28■□□□□ 0.52
ABR-223ENST00000573895 JDP2Q8WYK2 163 aa18.28■□□□□ 0.52
ABR-223ENST00000573895 ZNF428Q96B54 188 aa18.28■□□□□ 0.52
ABR-223ENST00000573895 CCDC152Q4G0S7 254 aa18.27■□□□□ 0.52
ABR-223ENST00000573895 LINS1Q8NG48 757 aa18.27■□□□□ 0.52
ABR-223ENST00000573895 L3MBTL3Q96JM7 780 aaPredicted RBP18.27■□□□□ 0.52
ABR-223ENST00000573895 POTECB2RU33 542 aa18.26■□□□□ 0.51
ABR-223ENST00000573895 H7C1W4 665 aa18.26■□□□□ 0.51
ABR-223ENST00000573895 FSTL1Q12841 308 aa18.26■□□□□ 0.51
ABR-223ENST00000573895 CWF19L2Q2TBE0 894 aaKnown RBP18.26■□□□□ 0.51
ABR-223ENST00000573895 DPP8Q6V1X1 898 aaPredicted RBP18.26■□□□□ 0.51
ABR-223ENST00000573895 MPNDQ8N594 471 aa18.26■□□□□ 0.51
ABR-223ENST00000573895 DDNO94850 711 aaPredicted RBP18.25■□□□□ 0.51
ABR-223ENST00000573895 HSPA6P17066 643 aa18.25■□□□□ 0.51
ABR-223ENST00000573895 RPS8P62241 208 aaKnown RBP18.25■□□□□ 0.51
ABR-223ENST00000573895 GCKRQ14397 625 aa18.25■□□□□ 0.51
ABR-223ENST00000573895 LARGE2Q8N3Y3 721 aa18.25■□□□□ 0.51
ABR-223ENST00000573895 CELF1Q92879 486 aaKnown RBP18.25■□□□□ 0.51
ABR-223ENST00000573895 IQCA1LA6NCM1 817 aa18.24■□□□□ 0.51
ABR-223ENST00000573895 GPC2Q8N158 579 aa18.24■□□□□ 0.51
ABR-223ENST00000573895 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
ABR-223ENST00000573895 COL4A5P29400 1685 aa18.23■□□□□ 0.51
ABR-223ENST00000573895 RTL9Q8NET4 1388 aa18.23■□□□□ 0.51
ABR-223ENST00000573895 SLC51AQ86UW1 340 aa18.23■□□□□ 0.51
ABR-223ENST00000573895 PLA2G12BQ9BX93 195 aa18.23■□□□□ 0.51
ABR-223ENST00000573895 LTBP1Q14766 1721 aa18.23■□□□□ 0.51
ABR-223ENST00000573895 PPIP5K2O43314 1243 aa18.22■□□□□ 0.51
ABR-223ENST00000573895 CTSWP56202 376 aa18.22■□□□□ 0.51
ABR-223ENST00000573895 EIF6P56537 245 aaKnown RBP18.22■□□□□ 0.51
ABR-223ENST00000573895 KIAA2012Q0VF49 1180 aa18.22■□□□□ 0.51
ABR-223ENST00000573895 SMC1BQ8NDV3 1235 aa18.22■□□□□ 0.51
ABR-223ENST00000573895 TTLL11Q8NHH1 800 aa18.22■□□□□ 0.51
ABR-223ENST00000573895 ZNF541Q9H0D2 1346 aa18.22■□□□□ 0.51
ABR-223ENST00000573895 COL4A1P02462 1669 aa18.22■□□□□ 0.51
ABR-223ENST00000573895 DUOX1Q9NRD9 1551 aa18.21■□□□□ 0.51
ABR-223ENST00000573895 CASP7P55210 303 aa18.21■□□□□ 0.51
ABR-223ENST00000573895 BEND3Q5T5X7 828 aa18.21■□□□□ 0.51
ABR-223ENST00000573895 UBE3BQ7Z3V4 1068 aa18.21■□□□□ 0.51
ABR-223ENST00000573895 NIM1KQ8IY84 436 aa18.21■□□□□ 0.51
ABR-223ENST00000573895 JARID2Q92833 1246 aaPredicted RBP18.21■□□□□ 0.51
ABR-223ENST00000573895 SEC31BQ9NQW1 1179 aa18.21■□□□□ 0.51
ABR-223ENST00000573895 AOC3Q16853 763 aa18.2■□□□□ 0.5
ABR-223ENST00000573895 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
ABR-223ENST00000573895 F6X3S4 739 aa18.19■□□□□ 0.5
ABR-223ENST00000573895 ALDH1L1O75891 902 aa18.19■□□□□ 0.5
ABR-223ENST00000573895 ALDH1L2Q3SY69 923 aa18.19■□□□□ 0.5
ABR-223ENST00000573895 MRPL50Q8N5N7 158 aaKnown RBP18.19■□□□□ 0.5
ABR-223ENST00000573895 CDC5LQ99459 802 aaKnown RBP18.19■□□□□ 0.5
ABR-223ENST00000573895 ZNRF3Q9ULT6 936 aa18.19■□□□□ 0.5
ABR-223ENST00000573895 NSFL1CQ9UNZ2 370 aaKnown RBP18.19■□□□□ 0.5
ABR-223ENST00000573895 PTPRCP08575 1304 aa18.19■□□□□ 0.5
ABR-223ENST00000573895 APLP1P51693 650 aa18.18■□□□□ 0.5
ABR-223ENST00000573895 ANKRD18AQ8IVF6 992 aa18.18■□□□□ 0.5
ABR-223ENST00000573895 CSF1RP07333 972 aa18.17■□□□□ 0.5
ABR-223ENST00000573895 GPSM2P81274 684 aa18.17■□□□□ 0.5
ABR-223ENST00000573895 WASHC4Q2M389 1173 aa18.17■□□□□ 0.5
ABR-223ENST00000573895 SSH1Q8WYL5 1049 aa18.17■□□□□ 0.5
ABR-223ENST00000573895 EYA3Q99504 573 aa18.17■□□□□ 0.5
ABR-223ENST00000573895 TAF1DQ9H5J8 278 aaPredicted RBP18.17■□□□□ 0.5
ABR-223ENST00000573895 BSDC1Q9NW68 430 aaPredicted RBP18.17■□□□□ 0.5
ABR-223ENST00000573895 HACL1Q9UJ83 578 aa18.17■□□□□ 0.5
ABR-223ENST00000573895 RARSP54136 660 aaKnown RBP18.16■□□□□ 0.5
ABR-223ENST00000573895 TBC1D16Q8TBP0 767 aa18.16■□□□□ 0.5
ABR-223ENST00000573895 CCDC85AQ96PX6 553 aaPredicted RBP18.16■□□□□ 0.5
ABR-223ENST00000573895 SRCIN1Q9C0H9 1055 aa18.16■□□□□ 0.5
ABR-223ENST00000573895 GREM2Q9H772 168 aa18.16■□□□□ 0.5
ABR-223ENST00000573895 POLLQ9UGP5 575 aa18.16■□□□□ 0.5
ABR-223ENST00000573895 SPEF2Q9C093 1822 aa18.15■□□□□ 0.5
ABR-223ENST00000573895 C6orf229H3BNL8 230 aa18.15■□□□□ 0.5
ABR-223ENST00000573895 GRM8O00222 908 aa18.15■□□□□ 0.5
ABR-223ENST00000573895 PNMA8AQ86V59 439 aaPredicted RBP18.15■□□□□ 0.5
ABR-223ENST00000573895 SUPT16HQ9Y5B9 1047 aaKnown RBP18.15■□□□□ 0.5
ABR-223ENST00000573895 ADAMTSL1Q8N6G6 1762 aa18.14■□□□□ 0.5
ABR-223ENST00000573895 EPHX2P34913 555 aa18.14■□□□□ 0.49
ABR-223ENST00000573895 BRPF1P55201 1214 aaPredicted RBP18.14■□□□□ 0.49
ABR-223ENST00000573895 CXCL9Q07325 125 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms