RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 JARID2Q92833 1246 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-213ENST00000573519 METTL22Q9BUU2 404 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-213ENST00000573519 CWC25Q9NXE8 425 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-213ENST00000573519 PI4KAP2A4QPH2 592 aa16.3■□□□□ 0.2
NPLOC4-213ENST00000573519 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
NPLOC4-213ENST00000573519 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
NPLOC4-213ENST00000573519 NIM1KQ8IY84 436 aa16.3■□□□□ 0.2
NPLOC4-213ENST00000573519 PI4KAP1Q8N8J0 262 aa16.3■□□□□ 0.2
NPLOC4-213ENST00000573519 CCDC191Q8NCU4 936 aa16.3■□□□□ 0.2
NPLOC4-213ENST00000573519 L3MBTL3Q96JM7 780 aaPredicted RBP16.3■□□□□ 0.2
NPLOC4-213ENST00000573519 COL4A5P29400 1685 aa16.3■□□□□ 0.2
NPLOC4-213ENST00000573519 POTEIP0CG38 1075 aa16.29■□□□□ 0.2
NPLOC4-213ENST00000573519 POTEJP0CG39 1038 aa16.29■□□□□ 0.2
NPLOC4-213ENST00000573519 HSP90B1P14625 803 aaKnown RBP16.29■□□□□ 0.2
NPLOC4-213ENST00000573519 NEXNQ0ZGT2 675 aa16.29■□□□□ 0.2
NPLOC4-213ENST00000573519 KSR2Q6VAB6 950 aa16.29■□□□□ 0.2
NPLOC4-213ENST00000573519 G2E3Q7L622 706 aa16.29■□□□□ 0.2
NPLOC4-213ENST00000573519 GPC2Q8N158 579 aa16.29■□□□□ 0.2
NPLOC4-213ENST00000573519 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
NPLOC4-213ENST00000573519 HACL1Q9UJ83 578 aa16.29■□□□□ 0.2
NPLOC4-213ENST00000573519 PCCAP05165 728 aaPredicted RBP16.28■□□□□ 0.2
NPLOC4-213ENST00000573519 EXOSC9Q06265 439 aaKnown RBP16.28■□□□□ 0.2
NPLOC4-213ENST00000573519 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
NPLOC4-213ENST00000573519 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
NPLOC4-213ENST00000573519 TAF1DQ9H5J8 278 aaPredicted RBP16.28■□□□□ 0.2
NPLOC4-213ENST00000573519 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
NPLOC4-213ENST00000573519 CEP350Q5VT06 3117 aa16.28■□□□□ 0.2
NPLOC4-213ENST00000573519 EPHX2P34913 555 aa16.27■□□□□ 0.2
NPLOC4-213ENST00000573519 CCDC85AQ96PX6 553 aaPredicted RBP16.27■□□□□ 0.2
NPLOC4-213ENST00000573519 TAF1P21675 1872 aa16.27■□□□□ 0.19
NPLOC4-213ENST00000573519 PDE8AO60658 829 aa16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 LMOD1P29536 600 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 FLIIQ13045 1269 aa16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 FKBP5Q13451 457 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 CWF19L2Q2TBE0 894 aaKnown RBP16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 CCDC152Q4G0S7 254 aa16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 RTFDC1Q9BY42 306 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 VPS33BQ9H267 617 aa16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 MYH16Q9H6N6 1097 aa16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 NSFL1CQ9UNZ2 370 aaKnown RBP16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 SCN4AP35499 1836 aa16.26■□□□□ 0.19
NPLOC4-213ENST00000573519 VAMP4O75379 141 aa16.25■□□□□ 0.19
NPLOC4-213ENST00000573519 IGKV5-2P06315 115 aa16.25■□□□□ 0.19
NPLOC4-213ENST00000573519 LDHDQ86WU2 507 aa16.25■□□□□ 0.19
NPLOC4-213ENST00000573519 SEC31BQ9NQW1 1179 aa16.25■□□□□ 0.19
NPLOC4-213ENST00000573519 ZNRF3Q9ULT6 936 aa16.25■□□□□ 0.19
NPLOC4-213ENST00000573519 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
NPLOC4-213ENST00000573519 RPS8P62241 208 aaKnown RBP16.24■□□□□ 0.19
NPLOC4-213ENST00000573519 KIAA2012Q0VF49 1180 aa16.24■□□□□ 0.19
NPLOC4-213ENST00000573519 PNMA8AQ86V59 439 aaPredicted RBP16.24■□□□□ 0.19
NPLOC4-213ENST00000573519 DNAJC5GQ8N7S2 189 aa16.24■□□□□ 0.19
NPLOC4-213ENST00000573519 COL4A1P02462 1669 aa16.24■□□□□ 0.19
NPLOC4-213ENST00000573519 CDHR2Q9BYE9 1310 aa16.23■□□□□ 0.19
NPLOC4-213ENST00000573519 LRRC37AA6NMS7 1700 aa16.23■□□□□ 0.19
NPLOC4-213ENST00000573519 NEURL1BA8MQ27 555 aa16.23■□□□□ 0.19
NPLOC4-213ENST00000573519 GPSM2P81274 684 aa16.23■□□□□ 0.19
NPLOC4-213ENST00000573519 WASHC4Q2M389 1173 aa16.23■□□□□ 0.19
NPLOC4-213ENST00000573519 DUOX1Q9NRD9 1551 aa16.22■□□□□ 0.19
NPLOC4-213ENST00000573519 RIMBP2O15034 1052 aa16.22■□□□□ 0.19
NPLOC4-213ENST00000573519 CXCL9Q07325 125 aa16.22■□□□□ 0.19
NPLOC4-213ENST00000573519 DNAAF4Q8WXU2 420 aa16.22■□□□□ 0.19
NPLOC4-213ENST00000573519 KLRG1Q96E93 195 aa16.22■□□□□ 0.19
NPLOC4-213ENST00000573519 RAD17O75943 681 aa16.21■□□□□ 0.19
NPLOC4-213ENST00000573519 EPS15P42566 896 aa16.21■□□□□ 0.19
NPLOC4-213ENST00000573519 SCNN1DP51172 638 aa16.21■□□□□ 0.19
NPLOC4-213ENST00000573519 CTSWP56202 376 aa16.21■□□□□ 0.19
NPLOC4-213ENST00000573519 CIAPIN1Q6FI81 312 aa16.21■□□□□ 0.19
NPLOC4-213ENST00000573519 UBE3BQ7Z3V4 1068 aa16.21■□□□□ 0.19
NPLOC4-213ENST00000573519 ANKIB1Q9P2G1 1089 aa16.21■□□□□ 0.19
NPLOC4-213ENST00000573519 MAP1SQ66K74 1059 aaPredicted RBP16.2■□□□□ 0.18
NPLOC4-213ENST00000573519 ANKRD18AQ8IVF6 992 aa16.2■□□□□ 0.18
NPLOC4-213ENST00000573519 GPR101Q96P66 508 aaPredicted RBP16.2■□□□□ 0.18
NPLOC4-213ENST00000573519 EYA3Q99504 573 aa16.2■□□□□ 0.18
NPLOC4-213ENST00000573519 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
NPLOC4-213ENST00000573519 DBNDD1Q9H9R9 158 aa16.2■□□□□ 0.18
NPLOC4-213ENST00000573519 POLLQ9UGP5 575 aa16.2■□□□□ 0.18
NPLOC4-213ENST00000573519 LTBP1Q14766 1721 aa16.19■□□□□ 0.18
NPLOC4-213ENST00000573519 UFL1O94874 794 aa16.19■□□□□ 0.18
NPLOC4-213ENST00000573519 GMPSP49915 693 aaPredicted RBP16.19■□□□□ 0.18
NPLOC4-213ENST00000573519 GCKRQ14397 625 aa16.19■□□□□ 0.18
NPLOC4-213ENST00000573519 TNIP1Q15025 636 aa16.19■□□□□ 0.18
NPLOC4-213ENST00000573519 TBC1D16Q8TBP0 767 aa16.19■□□□□ 0.18
NPLOC4-213ENST00000573519 CDC5LQ99459 802 aaKnown RBP16.19■□□□□ 0.18
NPLOC4-213ENST00000573519 YDJCA8MPS7 323 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 F6X3S4 739 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 G3V3G9 751 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 H7C1W4 665 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 CCER2I3L3R5 266 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 DOK7Q18PE1 504 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 DCAF8Q5TAQ9 597 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 CNTROBQ8N137 903 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 LINS1Q8NG48 757 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 TTLL11Q8NHH1 800 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 GREM2Q9H772 168 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 GPRC5DQ9NZD1 345 aa16.18■□□□□ 0.18
NPLOC4-213ENST00000573519 USP50Q70EL3 339 aaPredicted RBP16.17■□□□□ 0.18
NPLOC4-213ENST00000573519 ZC3H12CQ9C0D7 883 aaKnown RBP16.17■□□□□ 0.18
NPLOC4-213ENST00000573519 CREBZFQ9NS37 354 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms