RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 RIC3Q7Z5B4 369 aa15.16■□□□□ 0.02
PRPF8-206ENST00000572723 COL4A5P29400 1685 aa15.16■□□□□ 0.02
PRPF8-206ENST00000572723 TAF1P21675 1872 aa15.15■□□□□ 0.02
PRPF8-206ENST00000572723 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
PRPF8-206ENST00000572723 ZEB1P37275 1124 aaPredicted RBP15.15■□□□□ 0.02
PRPF8-206ENST00000572723 EPS15P42566 896 aa15.15■□□□□ 0.02
PRPF8-206ENST00000572723 SCNN1DP51172 638 aa15.15■□□□□ 0.02
PRPF8-206ENST00000572723 CXCL9Q07325 125 aa15.15■□□□□ 0.02
PRPF8-206ENST00000572723 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
PRPF8-206ENST00000572723 KIAA2012Q0VF49 1180 aa15.15■□□□□ 0.02
PRPF8-206ENST00000572723 CCDC30Q5VVM6 783 aa15.15■□□□□ 0.02
PRPF8-206ENST00000572723 MAP1SQ66K74 1059 aaPredicted RBP15.15■□□□□ 0.02
PRPF8-206ENST00000572723 USP50Q70EL3 339 aaPredicted RBP15.15■□□□□ 0.02
PRPF8-206ENST00000572723 C8orf58Q8NAV2 365 aa15.15■□□□□ 0.02
PRPF8-206ENST00000572723 PHAXQ9H814 394 aaKnown RBP15.15■□□□□ 0.02
PRPF8-206ENST00000572723 MKRN1Q9UHC7 482 aaKnown RBP15.15■□□□□ 0.02
PRPF8-206ENST00000572723 IRS4O14654 1257 aaPredicted RBP15.14■□□□□ 0.01
PRPF8-206ENST00000572723 ZBTB38Q8NAP3 1195 aaPredicted RBP15.14■□□□□ 0.01
PRPF8-206ENST00000572723 ADAMTSL1Q8N6G6 1762 aa15.13■□□□□ 0.01
PRPF8-206ENST00000572723 HSPA1AP0DMV8 641 aaKnown RBP15.13■□□□□ 0.01
PRPF8-206ENST00000572723 HSPA1BP0DMV9 641 aaKnown RBP15.13■□□□□ 0.01
PRPF8-206ENST00000572723 TNIP1Q15025 636 aa15.13■□□□□ 0.01
PRPF8-206ENST00000572723 CCDC27Q2M243 656 aa15.13■□□□□ 0.01
PRPF8-206ENST00000572723 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
PRPF8-206ENST00000572723 COL13A1Q5TAT6 717 aaPredicted RBP15.13■□□□□ 0.01
PRPF8-206ENST00000572723 CCDC191Q8NCU4 936 aa15.13■□□□□ 0.01
PRPF8-206ENST00000572723 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
PRPF8-206ENST00000572723 DDX58O95786 925 aaKnown RBP15.12■□□□□ 0.01
PRPF8-206ENST00000572723 RPS8P62241 208 aaKnown RBP15.12■□□□□ 0.01
PRPF8-206ENST00000572723 CCDC184Q52MB2 194 aa15.12■□□□□ 0.01
PRPF8-206ENST00000572723 RTL5Q5HYW3 569 aaPredicted RBP15.12■□□□□ 0.01
PRPF8-206ENST00000572723 CIAPIN1Q6FI81 312 aa15.12■□□□□ 0.01
PRPF8-206ENST00000572723 CELF1Q92879 486 aaKnown RBP15.12■□□□□ 0.01
PRPF8-206ENST00000572723 ADARB2Q9NS39 739 aaKnown RBP15.12■□□□□ 0.01
PRPF8-206ENST00000572723 GPRC5DQ9NZD1 345 aa15.12■□□□□ 0.01
PRPF8-206ENST00000572723 CNTNAP1P78357 1384 aa15.11■□□□□ 0.01
PRPF8-206ENST00000572723 WASHC4Q2M389 1173 aa15.11■□□□□ 0.01
PRPF8-206ENST00000572723 MYD88Q99836 296 aa15.11■□□□□ 0.01
PRPF8-206ENST00000572723 METTL22Q9BUU2 404 aaPredicted RBP15.11■□□□□ 0.01
PRPF8-206ENST00000572723 NSFL1CQ9UNZ2 370 aaKnown RBP15.11■□□□□ 0.01
PRPF8-206ENST00000572723 DDX60Q8IY21 1712 aaKnown RBP15.11■□□□□ 0.01
PRPF8-206ENST00000572723 PCCAP05165 728 aaPredicted RBP15.1■□□□□ 0.01
PRPF8-206ENST00000572723 DEFB115Q30KQ5 88 aa15.1■□□□□ 0.01
PRPF8-206ENST00000572723 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
PRPF8-206ENST00000572723 TSPYL6Q8N831 410 aa15.1■□□□□ 0.01
PRPF8-206ENST00000572723 CWC25Q9NXE8 425 aaPredicted RBP15.1■□□□□ 0.01
PRPF8-206ENST00000572723 CDHR2Q9BYE9 1310 aa15.1■□□□□ 0.01
PRPF8-206ENST00000572723 LTBP1Q14766 1721 aa15.09■□□□□ 0.01
PRPF8-206ENST00000572723 RASSF10A6NK89 507 aa15.09■□□□□ 0.01
PRPF8-206ENST00000572723 PDE8AO60658 829 aa15.09■□□□□ 0.01
PRPF8-206ENST00000572723 RAD17O75943 681 aa15.09■□□□□ 0.01
PRPF8-206ENST00000572723 VEGFBP49765 207 aa15.09■□□□□ 0.01
PRPF8-206ENST00000572723 GMPSP49915 693 aaPredicted RBP15.09■□□□□ 0.01
PRPF8-206ENST00000572723 BCL2L13Q9BXK5 485 aa15.09■□□□□ 0.01
PRPF8-206ENST00000572723 C6orf229H3BNL8 230 aa15.08■□□□□ 0
PRPF8-206ENST00000572723 GPSM2P81274 684 aa15.08■□□□□ 0
PRPF8-206ENST00000572723 CCDC152Q4G0S7 254 aa15.08■□□□□ 0
PRPF8-206ENST00000572723 KSR2Q6VAB6 950 aa15.08■□□□□ 0
PRPF8-206ENST00000572723 ZC3H15Q8WU90 426 aaKnown RBP15.08■□□□□ 0
PRPF8-206ENST00000572723 EYA3Q99504 573 aa15.08■□□□□ 0
PRPF8-206ENST00000572723 STK31Q9BXU1 1019 aa15.08■□□□□ 0
PRPF8-206ENST00000572723 POLLQ9UGP5 575 aa15.08■□□□□ 0
PRPF8-206ENST00000572723 PGAP2Q9UHJ9 254 aa15.08■□□□□ 0
PRPF8-206ENST00000572723 IL16Q14005 1332 aa15.08■□□□□ 0
PRPF8-206ENST00000572723 YDJCA8MPS7 323 aa15.07■□□□□ 0
PRPF8-206ENST00000572723 H7C1D1 291 aa15.07■□□□□ 0
PRPF8-206ENST00000572723 DPF2Q92785 391 aa15.07■□□□□ 0
PRPF8-206ENST00000572723 TSR2Q969E8 191 aaKnown RBP15.07■□□□□ 0
PRPF8-206ENST00000572723 PODXL2Q9NZ53 605 aa15.07■□□□□ 0
PRPF8-206ENST00000572723 CNOT7Q9UIV1 285 aaKnown RBP15.07■□□□□ 0
PRPF8-206ENST00000572723 MAP3K2Q9Y2U5 619 aa15.07■□□□□ 0
PRPF8-206ENST00000572723 TRPM7Q96QT4 1865 aa15.06■□□□□ 0
PRPF8-206ENST00000572723 PI4KAP2A4QPH2 592 aa15.06■□□□□ 0
PRPF8-206ENST00000572723 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
PRPF8-206ENST00000572723 RIMBP2O15034 1052 aa15.06■□□□□ 0
PRPF8-206ENST00000572723 ANP32CO43423 234 aa15.06■□□□□ 0
PRPF8-206ENST00000572723 TWISTNBQ3B726 338 aaPredicted RBP15.06■□□□□ 0
PRPF8-206ENST00000572723 PI4KAP1Q8N8J0 262 aa15.06■□□□□ 0
PRPF8-206ENST00000572723 TBC1D16Q8TBP0 767 aa15.06■□□□□ 0
PRPF8-206ENST00000572723 ZC3H12CQ9C0D7 883 aaKnown RBP15.06■□□□□ 0
PRPF8-206ENST00000572723 MRS2Q9HD23 443 aa15.06■□□□□ 0
PRPF8-206ENST00000572723 SEC31BQ9NQW1 1179 aa15.06■□□□□ 0
PRPF8-206ENST00000572723 ABT1Q9ULW3 272 aaKnown RBP15.06■□□□□ 0
PRPF8-206ENST00000572723 LRRC37AA6NMS7 1700 aa15.06■□□□□ 0
PRPF8-206ENST00000572723 SLC4A2P04920 1241 aa15.05■□□□□ -0
PRPF8-206ENST00000572723 HIRAP54198 1017 aaPredicted RBP15.05■□□□□ -0
PRPF8-206ENST00000572723 NEXNQ0ZGT2 675 aa15.05■□□□□ -0
PRPF8-206ENST00000572723 CST9Q5W186 159 aa15.05■□□□□ -0
PRPF8-206ENST00000572723 TNS4Q8IZW8 715 aa15.05■□□□□ -0
PRPF8-206ENST00000572723 JARID2Q92833 1246 aaPredicted RBP15.05■□□□□ -0
PRPF8-206ENST00000572723 DBNDD1Q9H9R9 158 aa15.05■□□□□ -0
PRPF8-206ENST00000572723 WBP1LQ9NX94 342 aa15.05■□□□□ -0
PRPF8-206ENST00000572723 CACNA1FO60840 1977 aa15.05■□□□□ -0
PRPF8-206ENST00000572723 DUOX1Q9NRD9 1551 aa15.04■□□□□ -0
PRPF8-206ENST00000572723 WDR33Q9C0J8 1336 aaKnown RBP15.04■□□□□ -0
PRPF8-206ENST00000572723 TRAF5O00463 557 aa15.04■□□□□ -0
PRPF8-206ENST00000572723 PSMD14O00487 310 aa15.04■□□□□ -0
PRPF8-206ENST00000572723 IGKV5-2P06315 115 aa15.04■□□□□ -0
PRPF8-206ENST00000572723 FMR1Q06787 632 aaKnown RBP eCLIP15.04■□□□□ -03e-8■■■□□ 17.7
PRPF8-206ENST00000572723 WDR63Q8IWG1 891 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms