RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
CTDNEP1-205ENST00000570828 RBM17Q96I25 401 aaKnown RBP16.03■□□□□ 0.16
CTDNEP1-205ENST00000570828 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
CTDNEP1-205ENST00000570828 CACNA1SQ13698 1873 aa16.02■□□□□ 0.16
CTDNEP1-205ENST00000570828 SEC24BO95487 1268 aa16.02■□□□□ 0.16
CTDNEP1-205ENST00000570828 TCIRG1Q13488 830 aa16.02■□□□□ 0.16
CTDNEP1-205ENST00000570828 CCDC184Q52MB2 194 aa16.02■□□□□ 0.16
CTDNEP1-205ENST00000570828 CC2D2BQ6DHV5 1058 aa16.02■□□□□ 0.16
CTDNEP1-205ENST00000570828 NLRP10Q86W26 655 aa16.02■□□□□ 0.16
CTDNEP1-205ENST00000570828 SMC1BQ8NDV3 1235 aa16.02■□□□□ 0.16
CTDNEP1-205ENST00000570828 ZNF277Q9NRM2 450 aaPredicted RBP16.02■□□□□ 0.16
CTDNEP1-205ENST00000570828 HYPKQ9NX55 129 aa16.02■□□□□ 0.16
CTDNEP1-205ENST00000570828 PPEF1O14829 653 aaPredicted RBP16.01■□□□□ 0.15
CTDNEP1-205ENST00000570828 C3orf67Q6ZVT6 689 aa16.01■□□□□ 0.15
CTDNEP1-205ENST00000570828 PLBD2Q8NHP8 589 aa16.01■□□□□ 0.15
CTDNEP1-205ENST00000570828 CRAMP1Q96RY5 1269 aa16.01■□□□□ 0.15
CTDNEP1-205ENST00000570828 MRS2Q9HD23 443 aa16.01■□□□□ 0.15
CTDNEP1-205ENST00000570828 TRMT112Q9UI30 125 aaKnown RBP16.01■□□□□ 0.15
CTDNEP1-205ENST00000570828 GRIPAP1Q4V328 841 aa16■□□□□ 0.15
CTDNEP1-205ENST00000570828 SLC10A5Q5PT55 438 aa16■□□□□ 0.15
CTDNEP1-205ENST00000570828 ANKRD13DQ6ZTN6 518 aa16■□□□□ 0.15
CTDNEP1-205ENST00000570828 PSMD1Q99460 953 aa16■□□□□ 0.15
CTDNEP1-205ENST00000570828 TMX4Q9H1E5 349 aaPredicted RBP16■□□□□ 0.15
CTDNEP1-205ENST00000570828 SH3TC1Q8TE82 1336 aa15.99■□□□□ 0.15
CTDNEP1-205ENST00000570828 TTLL13PA6NNM8 815 aa15.99■□□□□ 0.15
CTDNEP1-205ENST00000570828 DDNO94850 711 aaPredicted RBP15.99■□□□□ 0.15
CTDNEP1-205ENST00000570828 IARSP41252 1262 aaKnown RBP15.99■□□□□ 0.15
CTDNEP1-205ENST00000570828 SYNE4Q8N205 404 aa15.99■□□□□ 0.15
CTDNEP1-205ENST00000570828 ELL2O00472 640 aaPredicted RBP15.98■□□□□ 0.15
CTDNEP1-205ENST00000570828 HCLS1P14317 486 aaPredicted RBP15.98■□□□□ 0.15
CTDNEP1-205ENST00000570828 GOLGA2Q08379 1002 aa15.98■□□□□ 0.15
CTDNEP1-205ENST00000570828 SNED1Q8TER0 1413 aa15.98■□□□□ 0.15
CTDNEP1-205ENST00000570828 WDR90Q96KV7 1748 aa15.98■□□□□ 0.15
CTDNEP1-205ENST00000570828 CHMP4AQ9BY43 222 aa15.98■□□□□ 0.15
CTDNEP1-205ENST00000570828 IQCA1LA6NCM1 817 aa15.97■□□□□ 0.15
CTDNEP1-205ENST00000570828 POTECB2RU33 542 aa15.97■□□□□ 0.15
CTDNEP1-205ENST00000570828 TCERG1O14776 1098 aaKnown RBP15.97■□□□□ 0.15
CTDNEP1-205ENST00000570828 CCDC27Q2M243 656 aa15.97■□□□□ 0.15
CTDNEP1-205ENST00000570828 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
CTDNEP1-205ENST00000570828 COLQQ9Y215 455 aaPredicted RBP15.97■□□□□ 0.15
CTDNEP1-205ENST00000570828 ABCC4O15439 1325 aa15.96■□□□□ 0.15
CTDNEP1-205ENST00000570828 ZNF541Q9H0D2 1346 aa15.96■□□□□ 0.15
CTDNEP1-205ENST00000570828 ANKRD36CQ5JPF3 1778 aa15.96■□□□□ 0.15
CTDNEP1-205ENST00000570828 ATP5J2-PTCD1G3V325 749 aa15.96■□□□□ 0.15
CTDNEP1-205ENST00000570828 RIC3Q7Z5B4 369 aa15.96■□□□□ 0.15
CTDNEP1-205ENST00000570828 C8orf58Q8NAV2 365 aa15.96■□□□□ 0.15
CTDNEP1-205ENST00000570828 ZNF428Q96B54 188 aa15.96■□□□□ 0.15
CTDNEP1-205ENST00000570828 ISCA1Q9BUE6 129 aa15.96■□□□□ 0.15
CTDNEP1-205ENST00000570828 CCDC88AQ3V6T2 1871 aa15.96■□□□□ 0.15
CTDNEP1-205ENST00000570828 DICER1Q9UPY3 1922 aaKnown RBP15.96■□□□□ 0.14
CTDNEP1-205ENST00000570828 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
CTDNEP1-205ENST00000570828 DDX46Q7L014 1031 aaKnown RBP15.95■□□□□ 0.14
CTDNEP1-205ENST00000570828 TSR2Q969E8 191 aaKnown RBP15.95■□□□□ 0.14
CTDNEP1-205ENST00000570828 L3MBTL3Q96JM7 780 aaPredicted RBP15.95■□□□□ 0.14
CTDNEP1-205ENST00000570828 ATP6V0A2Q9Y487 856 aa15.95■□□□□ 0.14
CTDNEP1-205ENST00000570828 FZD9O00144 591 aa15.94■□□□□ 0.14
CTDNEP1-205ENST00000570828 SLC51AQ86UW1 340 aa15.94■□□□□ 0.14
CTDNEP1-205ENST00000570828 WWC1Q8IX03 1113 aa15.94■□□□□ 0.14
CTDNEP1-205ENST00000570828 LARGE2Q8N3Y3 721 aa15.94■□□□□ 0.14
CTDNEP1-205ENST00000570828 PHAXQ9H814 394 aaKnown RBP15.94■□□□□ 0.14
CTDNEP1-205ENST00000570828 BBOX1O75936 387 aa15.93■□□□□ 0.14
CTDNEP1-205ENST00000570828 DDX58O95786 925 aaKnown RBP15.93■□□□□ 0.14
CTDNEP1-205ENST00000570828 EIF6P56537 245 aaKnown RBP15.93■□□□□ 0.14
CTDNEP1-205ENST00000570828 GRAPQ13588 217 aa15.93■□□□□ 0.14
CTDNEP1-205ENST00000570828 IER5LQ5T953 404 aa15.93■□□□□ 0.14
CTDNEP1-205ENST00000570828 GRAPLQ8TC17 118 aaPredicted RBP15.93■□□□□ 0.14
CTDNEP1-205ENST00000570828 FAM89AQ96GI7 184 aa15.93■□□□□ 0.14
CTDNEP1-205ENST00000570828 PPIP5K2O43314 1243 aa15.92■□□□□ 0.14
CTDNEP1-205ENST00000570828 HTRA3P83110 453 aa15.92■□□□□ 0.14
CTDNEP1-205ENST00000570828 TRIM28Q13263 835 aaKnown RBP15.92■□□□□ 0.14
CTDNEP1-205ENST00000570828 NIM1KQ8IY84 436 aa15.92■□□□□ 0.14
CTDNEP1-205ENST00000570828 TSPYL6Q8N831 410 aa15.92■□□□□ 0.14
CTDNEP1-205ENST00000570828 SUPT20HQ8NEM7 779 aa15.92■□□□□ 0.14
CTDNEP1-205ENST00000570828 STK31Q9BXU1 1019 aa15.92■□□□□ 0.14
CTDNEP1-205ENST00000570828 HACL1Q9UJ83 578 aa15.92■□□□□ 0.14
CTDNEP1-205ENST00000570828 IL16Q14005 1332 aa15.92■□□□□ 0.14
CTDNEP1-205ENST00000570828 RTL5Q5HYW3 569 aaPredicted RBP15.91■□□□□ 0.14
CTDNEP1-205ENST00000570828 DPP8Q6V1X1 898 aaPredicted RBP15.91■□□□□ 0.14
CTDNEP1-205ENST00000570828 TMC4Q7Z404 712 aa15.91■□□□□ 0.14
CTDNEP1-205ENST00000570828 GPC2Q8N158 579 aa15.91■□□□□ 0.14
CTDNEP1-205ENST00000570828 DNAJC5GQ8N7S2 189 aa15.91■□□□□ 0.14
CTDNEP1-205ENST00000570828 MYD88Q99836 296 aa15.91■□□□□ 0.14
CTDNEP1-205ENST00000570828 TAF1DQ9H5J8 278 aaPredicted RBP15.91■□□□□ 0.14
CTDNEP1-205ENST00000570828 IRS4O14654 1257 aaPredicted RBP15.9■□□□□ 0.14
CTDNEP1-205ENST00000570828 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
CTDNEP1-205ENST00000570828 AOC3Q16853 763 aa15.9■□□□□ 0.14
CTDNEP1-205ENST00000570828 LDHDQ86WU2 507 aa15.9■□□□□ 0.14
CTDNEP1-205ENST00000570828 SP8Q8IXZ3 490 aa15.9■□□□□ 0.14
CTDNEP1-205ENST00000570828 MPNDQ8N594 471 aa15.9■□□□□ 0.14
CTDNEP1-205ENST00000570828 VPS33BQ9H267 617 aa15.9■□□□□ 0.14
CTDNEP1-205ENST00000570828 GJA3Q9Y6H8 435 aa15.9■□□□□ 0.14
CTDNEP1-205ENST00000570828 COL4A5P29400 1685 aa15.89■□□□□ 0.13
CTDNEP1-205ENST00000570828 EPHX2P34913 555 aa15.89■□□□□ 0.13
CTDNEP1-205ENST00000570828 SF3B3Q15393 1217 aaKnown RBP15.89■□□□□ 0.13
CTDNEP1-205ENST00000570828 TWISTNBQ3B726 338 aaPredicted RBP15.89■□□□□ 0.13
CTDNEP1-205ENST00000570828 EAPPQ56P03 285 aaPredicted RBP15.89■□□□□ 0.13
CTDNEP1-205ENST00000570828 ZBTB38Q8NAP3 1195 aaPredicted RBP15.89■□□□□ 0.13
CTDNEP1-205ENST00000570828 KLRG1Q96E93 195 aa15.89■□□□□ 0.13
CTDNEP1-205ENST00000570828 RTFDC1Q9BY42 306 aaPredicted RBP15.89■□□□□ 0.13
CTDNEP1-205ENST00000570828 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms