RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 WDR90Q96KV7 1748 aa23.27■■□□□ 1.32
SIN3A-212ENST00000568919 IGKV5-2P06315 115 aa23.26■■□□□ 1.31
SIN3A-212ENST00000568919 JDP2Q8WYK2 163 aa23.26■■□□□ 1.31
SIN3A-212ENST00000568919 ZNF521Q96K83 1311 aa23.26■■□□□ 1.31
SIN3A-212ENST00000568919 ZNF541Q9H0D2 1346 aa23.26■■□□□ 1.31
SIN3A-212ENST00000568919 HSP90B1P14625 803 aaKnown RBP23.25■■□□□ 1.31
SIN3A-212ENST00000568919 FLIIQ13045 1269 aa23.25■■□□□ 1.31
SIN3A-212ENST00000568919 MPNDQ8N594 471 aa23.25■■□□□ 1.31
SIN3A-212ENST00000568919 RTFDC1Q9BY42 306 aaPredicted RBP23.25■■□□□ 1.31
SIN3A-212ENST00000568919 NEXNQ0ZGT2 675 aa23.24■■□□□ 1.31
SIN3A-212ENST00000568919 LARGE2Q8N3Y3 721 aa23.24■■□□□ 1.31
SIN3A-212ENST00000568919 CELF1Q92879 486 aaKnown RBP23.24■■□□□ 1.31
SIN3A-212ENST00000568919 CACNA1FO60840 1977 aa23.23■■□□□ 1.31
SIN3A-212ENST00000568919 DPP8Q6V1X1 898 aaPredicted RBP23.23■■□□□ 1.31
SIN3A-212ENST00000568919 TMC4Q7Z404 712 aa23.23■■□□□ 1.31
SIN3A-212ENST00000568919 SMC1BQ8NDV3 1235 aa23.23■■□□□ 1.31
SIN3A-212ENST00000568919 L3MBTL3Q96JM7 780 aaPredicted RBP23.23■■□□□ 1.31
SIN3A-212ENST00000568919 VPS33BQ9H267 617 aa23.23■■□□□ 1.31
SIN3A-212ENST00000568919 PDE8AO60658 829 aa23.22■■□□□ 1.31
SIN3A-212ENST00000568919 CWF19L2Q2TBE0 894 aaKnown RBP23.22■■□□□ 1.31
SIN3A-212ENST00000568919 SUPT20HQ8NEM7 779 aa23.22■■□□□ 1.31
SIN3A-212ENST00000568919 NEURL1BA8MQ27 555 aa23.21■■□□□ 1.31
SIN3A-212ENST00000568919 CCER2I3L3R5 266 aa23.21■■□□□ 1.31
SIN3A-212ENST00000568919 PPIP5K2O43314 1243 aa23.21■■□□□ 1.31
SIN3A-212ENST00000568919 APLP1P51693 650 aa23.21■■□□□ 1.31
SIN3A-212ENST00000568919 RPS8P62241 208 aaKnown RBP23.21■■□□□ 1.31
SIN3A-212ENST00000568919 FKBP5Q13451 457 aaPredicted RBP23.21■■□□□ 1.31
SIN3A-212ENST00000568919 COL4A5P29400 1685 aa23.21■■□□□ 1.31
SIN3A-212ENST00000568919 EIF6P56537 245 aaKnown RBP23.2■■□□□ 1.3
SIN3A-212ENST00000568919 AOC3Q16853 763 aa23.2■■□□□ 1.3
SIN3A-212ENST00000568919 SEC31BQ9NQW1 1179 aa23.2■■□□□ 1.3
SIN3A-212ENST00000568919 CDHR2Q9BYE9 1310 aa23.19■■□□□ 1.3
SIN3A-212ENST00000568919 IQCA1LA6NCM1 817 aa23.19■■□□□ 1.3
SIN3A-212ENST00000568919 NIM1KQ8IY84 436 aa23.19■■□□□ 1.3
SIN3A-212ENST00000568919 GPC2Q8N158 579 aa23.19■■□□□ 1.3
SIN3A-212ENST00000568919 DNAAF4Q8WXU2 420 aa23.19■■□□□ 1.3
SIN3A-212ENST00000568919 H7C1W4 665 aa23.18■■□□□ 1.3
SIN3A-212ENST00000568919 CCDC152Q4G0S7 254 aa23.18■■□□□ 1.3
SIN3A-212ENST00000568919 TAF1DQ9H5J8 278 aaPredicted RBP23.18■■□□□ 1.3
SIN3A-212ENST00000568919 CCDC85AQ96PX6 553 aaPredicted RBP23.17■■□□□ 1.3
SIN3A-212ENST00000568919 NSFL1CQ9UNZ2 370 aaKnown RBP23.17■■□□□ 1.3
SIN3A-212ENST00000568919 GJA3Q9Y6H8 435 aa23.17■■□□□ 1.3
SIN3A-212ENST00000568919 SCN4AP35499 1836 aa23.17■■□□□ 1.3
SIN3A-212ENST00000568919 COL4A1P02462 1669 aa23.16■■□□□ 1.3
SIN3A-212ENST00000568919 POTEIP0CG38 1075 aa23.16■■□□□ 1.3
SIN3A-212ENST00000568919 POTEJP0CG39 1038 aa23.16■■□□□ 1.3
SIN3A-212ENST00000568919 KIAA2012Q0VF49 1180 aa23.16■■□□□ 1.3
SIN3A-212ENST00000568919 GCKRQ14397 625 aa23.16■■□□□ 1.3
SIN3A-212ENST00000568919 HACL1Q9UJ83 578 aa23.16■■□□□ 1.3
SIN3A-212ENST00000568919 GPSM2P81274 684 aa23.15■■□□□ 1.3
SIN3A-212ENST00000568919 LINS1Q8NG48 757 aa23.15■■□□□ 1.3
SIN3A-212ENST00000568919 ZNRF3Q9ULT6 936 aa23.15■■□□□ 1.3
SIN3A-212ENST00000568919 E9PSI1 815 aa23.14■■□□□ 1.29
SIN3A-212ENST00000568919 CTSWP56202 376 aa23.14■■□□□ 1.29
SIN3A-212ENST00000568919 SLFN5Q08AF3 891 aa23.14■■□□□ 1.29
SIN3A-212ENST00000568919 CHADLQ6NUI6 762 aa23.14■■□□□ 1.29
SIN3A-212ENST00000568919 UBE3BQ7Z3V4 1068 aa23.14■■□□□ 1.29
SIN3A-212ENST00000568919 TTLL11Q8NHH1 800 aa23.14■■□□□ 1.29
SIN3A-212ENST00000568919 CEP350Q5VT06 3117 aa23.13■■□□□ 1.29
SIN3A-212ENST00000568919 F6X3S4 739 aa23.13■■□□□ 1.29
SIN3A-212ENST00000568919 EPHX2P34913 555 aa23.13■■□□□ 1.29
SIN3A-212ENST00000568919 POLLQ9UGP5 575 aa23.13■■□□□ 1.29
SIN3A-212ENST00000568919 LRRC37AA6NMS7 1700 aa23.13■■□□□ 1.29
SIN3A-212ENST00000568919 CASP7P55210 303 aa23.12■■□□□ 1.29
SIN3A-212ENST00000568919 HTRA3P83110 453 aa23.12■■□□□ 1.29
SIN3A-212ENST00000568919 CXCL9Q07325 125 aa23.12■■□□□ 1.29
SIN3A-212ENST00000568919 WASHC4Q2M389 1173 aa23.12■■□□□ 1.29
SIN3A-212ENST00000568919 DNAJC5GQ8N7S2 189 aa23.12■■□□□ 1.29
SIN3A-212ENST00000568919 C6orf229H3BNL8 230 aa23.11■■□□□ 1.29
SIN3A-212ENST00000568919 BEND3Q5T5X7 828 aa23.11■■□□□ 1.29
SIN3A-212ENST00000568919 ANKRD18AQ8IVF6 992 aa23.11■■□□□ 1.29
SIN3A-212ENST00000568919 DUOX1Q9NRD9 1551 aa23.1■■□□□ 1.29
SIN3A-212ENST00000568919 RIMBP2O15034 1052 aa23.1■■□□□ 1.29
SIN3A-212ENST00000568919 EAPPQ56P03 285 aaPredicted RBP23.1■■□□□ 1.29
SIN3A-212ENST00000568919 LDHDQ86WU2 507 aa23.1■■□□□ 1.29
SIN3A-212ENST00000568919 TBC1D16Q8TBP0 767 aa23.1■■□□□ 1.29
SIN3A-212ENST00000568919 CDCA7LQ96GN5 454 aa23.1■■□□□ 1.29
SIN3A-212ENST00000568919 PLA2G12BQ9BX93 195 aa23.1■■□□□ 1.29
SIN3A-212ENST00000568919 GREM2Q9H772 168 aa23.1■■□□□ 1.29
SIN3A-212ENST00000568919 PODXL2Q9NZ53 605 aa23.1■■□□□ 1.29
SIN3A-212ENST00000568919 SCNN1DP51172 638 aa23.09■■□□□ 1.29
SIN3A-212ENST00000568919 PNMA8AQ86V59 439 aaPredicted RBP23.09■■□□□ 1.29
SIN3A-212ENST00000568919 LMOD1P29536 600 aaPredicted RBP23.08■■□□□ 1.29
SIN3A-212ENST00000568919 EPS15P42566 896 aa23.08■■□□□ 1.29
SIN3A-212ENST00000568919 CIAPIN1Q6FI81 312 aa23.08■■□□□ 1.29
SIN3A-212ENST00000568919 CDC5LQ99459 802 aaKnown RBP23.08■■□□□ 1.29
SIN3A-212ENST00000568919 ANKIB1Q9P2G1 1089 aa23.08■■□□□ 1.29
SIN3A-212ENST00000568919 CLEC11AQ9Y240 323 aa23.08■■□□□ 1.29
SIN3A-212ENST00000568919 MYH3P11055 1940 aa23.08■■□□□ 1.28
SIN3A-212ENST00000568919 YDJCA8MPS7 323 aa23.07■■□□□ 1.28
SIN3A-212ENST00000568919 RAD17O75943 681 aa23.07■■□□□ 1.28
SIN3A-212ENST00000568919 CSF1RP07333 972 aa23.07■■□□□ 1.28
SIN3A-212ENST00000568919 TRMT2AQ8IZ69 625 aaKnown RBP23.07■■□□□ 1.28
SIN3A-212ENST00000568919 MRPL50Q8N5N7 158 aaKnown RBP23.07■■□□□ 1.28
SIN3A-212ENST00000568919 EYA3Q99504 573 aa23.07■■□□□ 1.28
SIN3A-212ENST00000568919 TNIP1Q15025 636 aa23.06■■□□□ 1.28
SIN3A-212ENST00000568919 GPR101Q96P66 508 aaPredicted RBP23.06■■□□□ 1.28
SIN3A-212ENST00000568919 ZC3H12CQ9C0D7 883 aaKnown RBP23.06■■□□□ 1.28
SIN3A-212ENST00000568919 RTL9Q8NET4 1388 aa23.05■■□□□ 1.28
SIN3A-212ENST00000568919 DIEXFQ68CQ4 756 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms