RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 PHLPP1O60346 1717 aa23.43■■□□□ 1.34
CDH5-204ENST00000563425 XRCC6P12956 609 aaKnown RBP eCLIP23.43■■□□□ 1.34
CDH5-204ENST00000563425 CPA1P15085 419 aa23.43■■□□□ 1.34
CDH5-204ENST00000563425 KCNJ4P48050 445 aa23.43■■□□□ 1.34
CDH5-204ENST00000563425 SPEF2Q9C093 1822 aa23.43■■□□□ 1.34
CDH5-204ENST00000563425 ZNF609O15014 1411 aa23.43■■□□□ 1.34
CDH5-204ENST00000563425 RPAP1Q9BWH6 1393 aaPredicted RBP23.43■■□□□ 1.34
CDH5-204ENST00000563425 MAP3K15Q6ZN16 1313 aa23.43■■□□□ 1.34
CDH5-204ENST00000563425 SLC27A2O14975 620 aa23.43■■□□□ 1.34
CDH5-204ENST00000563425 PCCAP05165 728 aaPredicted RBP23.43■■□□□ 1.34
CDH5-204ENST00000563425 PDRG1Q9NUG6 133 aa23.43■■□□□ 1.34
CDH5-204ENST00000563425 LTBP4Q8N2S1 1624 aa23.42■■□□□ 1.34
CDH5-204ENST00000563425 TCHHQ07283 1943 aa23.42■■□□□ 1.34
CDH5-204ENST00000563425 ZNF589Q86UQ0 364 aaPredicted RBP23.42■■□□□ 1.34
CDH5-204ENST00000563425 ZNF594Q96JF6 807 aaPredicted RBP23.42■■□□□ 1.34
CDH5-204ENST00000563425 SLC4A9Q96Q91 983 aa23.42■■□□□ 1.34
CDH5-204ENST00000563425 CYP19A1P11511 503 aaPredicted RBP23.41■■□□□ 1.34
CDH5-204ENST00000563425 LRRC24Q50LG9 513 aa23.41■■□□□ 1.34
CDH5-204ENST00000563425 DNAJC2Q99543 621 aaKnown RBP23.41■■□□□ 1.34
CDH5-204ENST00000563425 PLA2G12BQ9BX93 195 aa23.41■■□□□ 1.34
CDH5-204ENST00000563425 MRE11P49959 708 aa23.41■■□□□ 1.34
CDH5-204ENST00000563425 RNF20Q5VTR2 975 aa23.41■■□□□ 1.34
CDH5-204ENST00000563425 GIGYF2Q6Y7W6 1299 aaKnown RBP23.41■■□□□ 1.34
CDH5-204ENST00000563425 NDUFB9Q9Y6M9 179 aa23.41■■□□□ 1.34
CDH5-204ENST00000563425 TAF5LO75529 589 aa23.4■■□□□ 1.34
CDH5-204ENST00000563425 ZBTB38Q8NAP3 1195 aaPredicted RBP23.4■■□□□ 1.34
CDH5-204ENST00000563425 NEUROD6Q96NK8 337 aa23.4■■□□□ 1.34
CDH5-204ENST00000563425 PSMA5P28066 241 aa23.39■■□□□ 1.34
CDH5-204ENST00000563425 FOXD4L5Q5VV16 416 aaPredicted RBP23.39■■□□□ 1.34
CDH5-204ENST00000563425 FOXD4L4Q8WXT5 416 aaPredicted RBP23.39■■□□□ 1.34
CDH5-204ENST00000563425 ARXQ96QS3 562 aa23.39■■□□□ 1.34
CDH5-204ENST00000563425 FBXO3Q9UK99 471 aa23.39■■□□□ 1.34
CDH5-204ENST00000563425 PALLDQ8WX93 1383 aa23.39■■□□□ 1.33
CDH5-204ENST00000563425 TIMM10P62072 90 aa23.39■■□□□ 1.33
CDH5-204ENST00000563425 USPL1Q5W0Q7 1092 aa23.39■■□□□ 1.33
CDH5-204ENST00000563425 TICAM2Q86XR7 235 aa23.39■■□□□ 1.33
CDH5-204ENST00000563425 KBTBD3Q8NAB2 608 aa23.39■■□□□ 1.33
CDH5-204ENST00000563425 ZSCAN31Q96LW9 406 aaPredicted RBP23.39■■□□□ 1.33
CDH5-204ENST00000563425 HMG20BQ9P0W2 317 aa23.39■■□□□ 1.33
CDH5-204ENST00000563425 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.39■■□□□ 1.33
CDH5-204ENST00000563425 WDR33Q9C0J8 1336 aaKnown RBP23.38■■□□□ 1.33
CDH5-204ENST00000563425 PRPF40AO75400 957 aaKnown RBP23.38■■□□□ 1.33
CDH5-204ENST00000563425 CCDC57Q2TAC2 916 aa23.38■■□□□ 1.33
CDH5-204ENST00000563425 TSGA10IPQ3SY00 556 aa23.38■■□□□ 1.33
CDH5-204ENST00000563425 LARP6Q9BRS8 491 aaKnown RBP23.38■■□□□ 1.33
CDH5-204ENST00000563425 DDX46Q7L014 1031 aaKnown RBP23.37■■□□□ 1.33
CDH5-204ENST00000563425 FAM89AQ96GI7 184 aa23.37■■□□□ 1.33
CDH5-204ENST00000563425 CDCA7Q9BWT1 371 aaPredicted RBP23.37■■□□□ 1.33
CDH5-204ENST00000563425 PUS3Q9BZE2 481 aaKnown RBP23.37■■□□□ 1.33
CDH5-204ENST00000563425 GRPEL1Q9HAV7 217 aa23.37■■□□□ 1.33
CDH5-204ENST00000563425 SH2B1Q9NRF2 756 aaPredicted RBP23.37■■□□□ 1.33
CDH5-204ENST00000563425 CDHR2Q9BYE9 1310 aa23.37■■□□□ 1.33
CDH5-204ENST00000563425 LARGE1O95461 756 aa23.37■■□□□ 1.33
CDH5-204ENST00000563425 CSF1RP07333 972 aa23.37■■□□□ 1.33
CDH5-204ENST00000563425 HSP90AB3PQ58FF7 597 aa23.37■■□□□ 1.33
CDH5-204ENST00000563425 GAS2L3Q86XJ1 694 aa23.37■■□□□ 1.33
CDH5-204ENST00000563425 CHAMP1Q96JM3 812 aa23.37■■□□□ 1.33
CDH5-204ENST00000563425 A0A1B0GUL7 405 aa23.36■■□□□ 1.33
CDH5-204ENST00000563425 HLFQ16534 295 aa23.36■■□□□ 1.33
CDH5-204ENST00000563425 MCMDC2Q4G0Z9 681 aa23.36■■□□□ 1.33
CDH5-204ENST00000563425 PAG1Q9NWQ8 432 aa23.36■■□□□ 1.33
CDH5-204ENST00000563425 NLRP10Q86W26 655 aa23.35■■□□□ 1.33
CDH5-204ENST00000563425 SYTL4Q96C24 671 aaPredicted RBP23.35■■□□□ 1.33
CDH5-204ENST00000563425 ALDH8A1Q9H2A2 487 aaPredicted RBP23.35■■□□□ 1.33
CDH5-204ENST00000563425 CEP126Q9P2H0 1117 aa23.35■■□□□ 1.33
CDH5-204ENST00000563425 CCDC9Q9Y3X0 531 aaKnown RBP23.35■■□□□ 1.33
CDH5-204ENST00000563425 SH3TC1Q8TE82 1336 aa23.35■■□□□ 1.33
CDH5-204ENST00000563425 LAMA4Q16363 1823 aa23.35■■□□□ 1.33
CDH5-204ENST00000563425 PRIM1P49642 420 aaKnown RBP23.35■■□□□ 1.33
CDH5-204ENST00000563425 ZBTB1Q9Y2K1 713 aa23.35■■□□□ 1.33
CDH5-204ENST00000563425 SPATA31A1Q5TZJ5 1347 aa23.35■■□□□ 1.33
CDH5-204ENST00000563425 NWD2Q9ULI1 1742 aa23.34■■□□□ 1.33
CDH5-204ENST00000563425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.34■■□□□ 1.33
CDH5-204ENST00000563425 SMC3Q9UQE7 1217 aa23.34■■□□□ 1.33
CDH5-204ENST00000563425 THRAP3Q9Y2W1 955 aaKnown RBP23.34■■□□□ 1.33
CDH5-204ENST00000563425 GOLIM4O00461 696 aa23.33■■□□□ 1.33
CDH5-204ENST00000563425 CHGBP05060 677 aa23.33■■□□□ 1.33
CDH5-204ENST00000563425 BLOC1S2Q6QNY1 142 aa23.33■■□□□ 1.33
CDH5-204ENST00000563425 GPT2Q8TD30 523 aa23.33■■□□□ 1.33
CDH5-204ENST00000563425 TAF6LQ9Y6J9 622 aa23.33■■□□□ 1.33
CDH5-204ENST00000563425 MYH7P12883 1935 aa23.33■■□□□ 1.33
CDH5-204ENST00000563425 SEC62Q99442 399 aaKnown RBP23.33■■□□□ 1.32
CDH5-204ENST00000563425 PANK2Q9BZ23 570 aa23.33■■□□□ 1.32
CDH5-204ENST00000563425 U3KPZ7 1027 aaPredicted RBP23.33■■□□□ 1.32
CDH5-204ENST00000563425 NCLP19338 710 aaKnown RBP23.32■■□□□ 1.32
CDH5-204ENST00000563425 RPS6KB1P23443 525 aa23.32■■□□□ 1.32
CDH5-204ENST00000563425 IL6STP40189 918 aaPredicted RBP23.32■■□□□ 1.32
CDH5-204ENST00000563425 IFIT5Q13325 482 aaKnown RBP23.32■■□□□ 1.32
CDH5-204ENST00000563425 CAVIN1Q6NZI2 390 aaKnown RBP23.32■■□□□ 1.32
CDH5-204ENST00000563425 CCDC83Q8IWF9 413 aa23.32■■□□□ 1.32
CDH5-204ENST00000563425 AKAP2Q9Y2D5 859 aa23.32■■□□□ 1.32
CDH5-204ENST00000563425 ADAMTS2O95450 1211 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 IFIT1P09914 478 aaKnown RBP23.31■■□□□ 1.32
CDH5-204ENST00000563425 GPTP24298 496 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 COL9A3Q14050 684 aaPredicted RBP23.31■■□□□ 1.32
CDH5-204ENST00000563425 KRT32Q14532 448 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 ME3Q16798 604 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 CCDC129Q6ZRS4 1044 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 HELLSQ9NRZ9 838 aa23.31■■□□□ 1.32
CDH5-204ENST00000563425 TPCN1Q9ULQ1 816 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms